Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021261
(705 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC007792-1|AAH07792.1| 386|Homo sapiens YLPM1 protein protein. 101 3e-21
AK090435-1|BAC03416.1| 1766|Homo sapiens FLJ00353 protein protein. 101 3e-21
AC007956-2|AAF61275.1| 1822|Homo sapiens unknown protein. 76 1e-13
L40403-1|AAC42008.1| 331|Homo sapiens protein ( Homo sapiens (c... 75 2e-13
AY358384-1|AAQ88750.1| 830|Homo sapiens EQYK340 protein. 33 0.75
BC112273-1|AAI12274.1| 830|Homo sapiens kinesin family member 7... 31 3.0
BC112271-1|AAI12272.1| 830|Homo sapiens kinesin family member 7... 31 3.0
BC104044-1|AAI04045.1| 830|Homo sapiens kinesin family member 7... 31 3.0
BC086311-1|AAH86311.1| 460|Homo sapiens WD repeat domain 8 prot... 31 5.3
BC002611-1|AAH02611.1| 435|Homo sapiens WDR8 protein protein. 31 5.3
AL513320-3|CAI14336.1| 435|Homo sapiens WD repeat domain 8 prot... 31 5.3
AL513320-2|CAI14335.1| 460|Homo sapiens WD repeat domain 8 prot... 31 5.3
AL136528-10|CAI19131.1| 217|Homo sapiens WD repeat domain 8 pro... 31 5.3
AL136528-8|CAI19129.1| 435|Homo sapiens WD repeat domain 8 prot... 31 5.3
AL136528-7|CAI19128.1| 460|Homo sapiens WD repeat domain 8 prot... 31 5.3
AK000437-1|BAA91164.1| 460|Homo sapiens protein ( Homo sapiens ... 31 5.3
AB034912-1|BAA92312.1| 460|Homo sapiens protein ( Homo sapiens ... 31 5.3
BC024325-1|AAH24325.1| 611|Homo sapiens adenosylhomocysteinase ... 30 7.0
BC008349-1|AAH08349.1| 611|Homo sapiens adenosylhomocysteinase ... 30 7.0
>BC007792-1|AAH07792.1| 386|Homo sapiens YLPM1 protein protein.
Length = 386
Score = 101 bits (241), Expect = 3e-21
Identities = 43/84 (51%), Positives = 64/84 (76%), Gaps = 1/84 (1%)
Frame = +2
Query: 2 LIRDKEAEHGGTA-RIMSIDDYFMQEGEVEERDPTTGKTIKKPTLKYEFDKDCEESYVNS 178
LIRDKE E GG A R++S+DDYF+ E E EE+DP +GK +KK ++YE++ + EE+Y S
Sbjct: 93 LIRDKEVEFGGPAPRVLSLDDYFITEVEKEEKDPDSGKKVKKKVMEYEYEAEMEETYRTS 152
Query: 179 LKRAFKRSITDGYFSFLIYDAVND 250
+ + FK+++ DG+F F+I DA+ND
Sbjct: 153 MFKTFKKTLDDGFFPFIILDAIND 176
Score = 75.8 bits (178), Expect = 1e-13
Identities = 34/82 (41%), Positives = 48/82 (58%)
Frame = +1
Query: 256 RHYADIWNFARQNGFQVYVCTMELDPQVCYKRNIHNRTLEDIEIICTRFFPTPSHHIQLD 435
RH+ W+ A+ GF+VY+ M D Q C KRNIH R L++I + + P H ++LD
Sbjct: 179 RHFDQFWSAAKTKGFEVYLAEMSADNQTCGKRNIHGRKLKEINKMADHWETAPRHMMRLD 238
Query: 436 PTTLLQSAAITDVHMEDVQTKL 501
+LLQ AAI +V MED +
Sbjct: 239 IRSLLQDAAIEEVEMEDFDANI 260
Score = 58.0 bits (134), Expect = 3e-08
Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = +1
Query: 574 MEDYLQL-DDWTPNKATPXKKTVRWADIEERGQQEKMRAIGFVVG 705
MEDYLQL DD+ + P KK VRWAD+EE+ ++ RAIGFVVG
Sbjct: 317 MEDYLQLPDDYDTRASEPGKKRVRWADLEEKKDADRKRAIGFVVG 361
>AK090435-1|BAC03416.1| 1766|Homo sapiens FLJ00353 protein protein.
Length = 1766
Score = 101 bits (241), Expect = 3e-21
Identities = 43/84 (51%), Positives = 64/84 (76%), Gaps = 1/84 (1%)
Frame = +2
Query: 2 LIRDKEAEHGGTA-RIMSIDDYFMQEGEVEERDPTTGKTIKKPTLKYEFDKDCEESYVNS 178
LIRDKE E GG A R++S+DDYF+ E E EE+DP +GK +KK ++YE++ + EE+Y S
Sbjct: 1479 LIRDKEVEFGGPAPRVLSLDDYFITEVEKEEKDPDSGKKVKKKVMEYEYEAEMEETYRTS 1538
Query: 179 LKRAFKRSITDGYFSFLIYDAVND 250
+ + FK+++ DG+F F+I DA+ND
Sbjct: 1539 MFKTFKKTLDDGFFPFIILDAIND 1562
Score = 75.8 bits (178), Expect = 1e-13
Identities = 34/82 (41%), Positives = 48/82 (58%)
Frame = +1
Query: 256 RHYADIWNFARQNGFQVYVCTMELDPQVCYKRNIHNRTLEDIEIICTRFFPTPSHHIQLD 435
RH+ W+ A+ GF+VY+ M D Q C KRNIH R L++I + + P H ++LD
Sbjct: 1565 RHFDQFWSAAKTKGFEVYLAEMSADNQTCGKRNIHGRKLKEINKMADHWETAPRHMMRLD 1624
Query: 436 PTTLLQSAAITDVHMEDVQTKL 501
+LLQ AAI +V MED +
Sbjct: 1625 IRSLLQDAAIEEVEMEDFDANI 1646
>AC007956-2|AAF61275.1| 1822|Homo sapiens unknown protein.
Length = 1822
Score = 75.8 bits (178), Expect = 1e-13
Identities = 34/82 (41%), Positives = 48/82 (58%)
Frame = +1
Query: 256 RHYADIWNFARQNGFQVYVCTMELDPQVCYKRNIHNRTLEDIEIICTRFFPTPSHHIQLD 435
RH+ W+ A+ GF+VY+ M D Q C KRNIH R L++I + + P H ++LD
Sbjct: 1704 RHFDQFWSAAKTKGFEVYLAEMSADNQTCGKRNIHGRKLKEINKMADHWETAPRHMMRLD 1763
Query: 436 PTTLLQSAAITDVHMEDVQTKL 501
+LLQ AAI +V MED +
Sbjct: 1764 IRSLLQDAAIEEVEMEDFDANI 1785
Score = 50.0 bits (114), Expect = 8e-06
Identities = 22/54 (40%), Positives = 38/54 (70%), Gaps = 3/54 (5%)
Frame = +2
Query: 98 PTTGKT-IKK--PTLKYEFDKDCEESYVNSLKRAFKRSITDGYFSFLIYDAVND 250
P +GKT + K ++YE++ + EE+Y S+ + FK+++ DG+F F+I DA+ND
Sbjct: 1648 PGSGKTHVAKLIRVMEYEYEAEMEETYRTSMFKTFKKTLDDGFFPFIILDAIND 1701
>L40403-1|AAC42008.1| 331|Homo sapiens protein ( Homo sapiens
(clone zap3) mRNA, 3' end of cds. ).
Length = 331
Score = 75.4 bits (177), Expect = 2e-13
Identities = 33/67 (49%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Frame = +2
Query: 2 LIRDKEAEHGGTA-RIMSIDDYFMQEGEVEERDPTTGKTIKKPTLKYEFDKDCEESYVNS 178
LIRDKE E GG A R++S+DDYF+ E E EE+DP +GK +KK ++YE++ + EE+Y S
Sbjct: 262 LIRDKEVEFGGPAPRVLSLDDYFITEVEKEEKDPDSGKKVKKKVMEYEYEAEMEETYRTS 321
Query: 179 LKRAFKR 199
+ + F +
Sbjct: 322 MFKTFXK 328
>AY358384-1|AAQ88750.1| 830|Homo sapiens EQYK340 protein.
Length = 830
Score = 33.5 bits (73), Expect = 0.75
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 273 LELCKAEWFPGIRMYNGA*PSSLLQA*HSQPYTGRHRNYMYTVLPDAESPHTTGSDHVTA 452
LEL + W G+R+ NG P S + H+ P G H ++ ++P A P D V +
Sbjct: 25 LELVRPGW-GGLRLLNGLPPGSFVPRPHTAPLGGAHA-HVLGMVPPACLP----GDEVGS 78
Query: 453 ERGHYGCSHGRRAD-EVIAEIH 515
E+ ++GR A E++ E++
Sbjct: 79 EQRGEQVTNGREAGAELLTEVN 100
>BC112273-1|AAI12274.1| 830|Homo sapiens kinesin family member 7
protein.
Length = 830
Score = 31.5 bits (68), Expect = 3.0
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 273 LELCKAEWFPGIRMYNGA*PSSLLQA*HSQPYTGRHRNYMYTVLPDAESPHTTGSDHVTA 452
LEL + W G R+ NG P S + H+ P G H ++ ++P A P D V +
Sbjct: 25 LELVRPGW-GGPRLLNGLPPGSFVPRPHTAPLGGAHA-HVLGMVPPACLP----GDEVGS 78
Query: 453 ERGHYGCSHGRRAD-EVIAEIH 515
E+ ++GR A E++ E++
Sbjct: 79 EQRGEQVTNGREAGAELLTEVN 100
>BC112271-1|AAI12272.1| 830|Homo sapiens kinesin family member 7
protein.
Length = 830
Score = 31.5 bits (68), Expect = 3.0
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 273 LELCKAEWFPGIRMYNGA*PSSLLQA*HSQPYTGRHRNYMYTVLPDAESPHTTGSDHVTA 452
LEL + W G R+ NG P S + H+ P G H ++ ++P A P D V +
Sbjct: 25 LELVRPGW-GGPRLLNGLPPGSFVPRPHTAPLGGAHA-HVLGMVPPACLP----GDEVGS 78
Query: 453 ERGHYGCSHGRRAD-EVIAEIH 515
E+ ++GR A E++ E++
Sbjct: 79 EQRGEQVTNGREAGAELLTEVN 100
>BC104044-1|AAI04045.1| 830|Homo sapiens kinesin family member 7
protein.
Length = 830
Score = 31.5 bits (68), Expect = 3.0
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 273 LELCKAEWFPGIRMYNGA*PSSLLQA*HSQPYTGRHRNYMYTVLPDAESPHTTGSDHVTA 452
LEL + W G R+ NG P S + H+ P G H ++ ++P A P D V +
Sbjct: 25 LELVRPGW-GGPRLLNGLPPGSFVPRPHTAPLGGAHA-HVLGMVPPACLP----GDEVGS 78
Query: 453 ERGHYGCSHGRRAD-EVIAEIH 515
E+ ++GR A E++ E++
Sbjct: 79 EQRGEQVTNGREAGAELLTEVN 100
>BC086311-1|AAH86311.1| 460|Homo sapiens WD repeat domain 8
protein.
Length = 460
Score = 30.7 bits (66), Expect = 5.3
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 254 LDIMLIFGTLQGRMVSRYTYVQWSLTLKSV 343
L+ ++ +L GR++S Y+ +WSL +KSV
Sbjct: 200 LEYKILLYSLDGRLLSTYSAYEWSLGIKSV 229
>BC002611-1|AAH02611.1| 435|Homo sapiens WDR8 protein protein.
Length = 435
Score = 30.7 bits (66), Expect = 5.3
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 254 LDIMLIFGTLQGRMVSRYTYVQWSLTLKSV 343
L+ ++ +L GR++S Y+ +WSL +KSV
Sbjct: 200 LEYKILLYSLDGRLLSTYSAYEWSLGIKSV 229
>AL513320-3|CAI14336.1| 435|Homo sapiens WD repeat domain 8
protein.
Length = 435
Score = 30.7 bits (66), Expect = 5.3
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 254 LDIMLIFGTLQGRMVSRYTYVQWSLTLKSV 343
L+ ++ +L GR++S Y+ +WSL +KSV
Sbjct: 200 LEYKILLYSLDGRLLSTYSAYEWSLGIKSV 229
>AL513320-2|CAI14335.1| 460|Homo sapiens WD repeat domain 8
protein.
Length = 460
Score = 30.7 bits (66), Expect = 5.3
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 254 LDIMLIFGTLQGRMVSRYTYVQWSLTLKSV 343
L+ ++ +L GR++S Y+ +WSL +KSV
Sbjct: 200 LEYKILLYSLDGRLLSTYSAYEWSLGIKSV 229
>AL136528-10|CAI19131.1| 217|Homo sapiens WD repeat domain 8
protein.
Length = 217
Score = 30.7 bits (66), Expect = 5.3
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 251 LLDIMLIFGTLQGRMVSRYTYVQWSLTLKSV 343
LL ++ +L GR++S Y+ +WSL +KSV
Sbjct: 170 LLRYKILLYSLDGRLLSTYSAYEWSLGIKSV 200
>AL136528-8|CAI19129.1| 435|Homo sapiens WD repeat domain 8
protein.
Length = 435
Score = 30.7 bits (66), Expect = 5.3
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 254 LDIMLIFGTLQGRMVSRYTYVQWSLTLKSV 343
L+ ++ +L GR++S Y+ +WSL +KSV
Sbjct: 200 LEYKILLYSLDGRLLSTYSAYEWSLGIKSV 229
>AL136528-7|CAI19128.1| 460|Homo sapiens WD repeat domain 8
protein.
Length = 460
Score = 30.7 bits (66), Expect = 5.3
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 254 LDIMLIFGTLQGRMVSRYTYVQWSLTLKSV 343
L+ ++ +L GR++S Y+ +WSL +KSV
Sbjct: 200 LEYKILLYSLDGRLLSTYSAYEWSLGIKSV 229
>AK000437-1|BAA91164.1| 460|Homo sapiens protein ( Homo sapiens
cDNA FLJ20430 fis, clone KAT03672. ).
Length = 460
Score = 30.7 bits (66), Expect = 5.3
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 254 LDIMLIFGTLQGRMVSRYTYVQWSLTLKSV 343
L+ ++ +L GR++S Y+ +WSL +KSV
Sbjct: 200 LEYKILLYSLDGRLLSTYSAYEWSLGIKSV 229
>AB034912-1|BAA92312.1| 460|Homo sapiens protein ( Homo sapiens
mRNA, complete cds, WD-repeat like sequence. ).
Length = 460
Score = 30.7 bits (66), Expect = 5.3
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 254 LDIMLIFGTLQGRMVSRYTYVQWSLTLKSV 343
L+ ++ +L GR++S Y+ +WSL +KSV
Sbjct: 200 LEYKILLYSLDGRLLSTYSAYEWSLGIKSV 229
>BC024325-1|AAH24325.1| 611|Homo sapiens adenosylhomocysteinase 3
protein.
Length = 611
Score = 30.3 bits (65), Expect = 7.0
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +2
Query: 74 EGEVEERDPTTGKTIKKPTLKYEFDKDCEESYVNSLKRAFKRSITDGYFSFLIYDAVND 250
+G V E T K I+ K EF+K + SL R+ +S TD Y S Y +D
Sbjct: 109 DGTVTEAPRTVKKQIQFADQKQEFNKRPTKIGRRSLSRSISQSSTDSYSSAASYTDSSD 167
>BC008349-1|AAH08349.1| 611|Homo sapiens adenosylhomocysteinase 3
protein.
Length = 611
Score = 30.3 bits (65), Expect = 7.0
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +2
Query: 74 EGEVEERDPTTGKTIKKPTLKYEFDKDCEESYVNSLKRAFKRSITDGYFSFLIYDAVND 250
+G V E T K I+ K EF+K + SL R+ +S TD Y S Y +D
Sbjct: 109 DGTVTEAPRTVKKQIQFADQKQEFNKRPTKIGRRSLSRSISQSSTDSYSSAASYTDSSD 167
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,190,880
Number of Sequences: 237096
Number of extensions: 2061716
Number of successful extensions: 5021
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5017
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -