Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021261
         (705 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1408|AAF46552.2| 1884|Drosophila melanogaster CG32685-P...    81   1e-15

>AE014298-1408|AAF46552.2| 1884|Drosophila melanogaster CG32685-PC
            protein.
          Length = 1884

 Score = 81.4 bits (192), Expect = 1e-15
 Identities = 38/86 (44%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
 Frame = +2

Query: 2    LIRDKEAEHGGT-ARIMSIDDYFMQEGEVEERDPTTGKTIKKPTLKYEFDKDCEESYVNS 178
            LI++KE E GG   RI+SIDDYF+ E + +E+ P TGK I K  + YE+D   EE+Y+  
Sbjct: 1575 LIKEKELEMGGANPRILSIDDYFLIENDYDEKCPKTGKKIPKKEILYEYDDTMEETYMQY 1634

Query: 179  LKRAFKRSITDGYFSFLIYDAVNDLL 256
            L ++FK++++D  + F+I D  N+ L
Sbjct: 1635 LIKSFKKTLSDNLYDFVIVDCNNNSL 1660



 Score = 72.1 bits (169), Expect = 7e-13
 Identities = 37/64 (57%), Positives = 46/64 (71%), Gaps = 2/64 (3%)
 Frame = +1

Query: 520  N*AKLDGTSKPLRPSQL-SMEDYLQLDDWTPNKATPX-KKTVRWADIEERGQQEKMRAIG 693
            N A+LDGT + ++  +  SM DYLQL+DW P   +   KK VRWADIEE+  Q+KMRAIG
Sbjct: 1792 NLARLDGTKRLMQNRRTTSMADYLQLEDWKPPTTSDNGKKRVRWADIEEKRSQKKMRAIG 1851

Query: 694  FVVG 705
            FVVG
Sbjct: 1852 FVVG 1855



 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 26/81 (32%), Positives = 46/81 (56%)
 Frame = +1

Query: 250  SPRHYADIWNFARQNGFQVYVCTMELDPQVCYKRNIHNRTLEDIEIICTRFFPTPSHHIQ 429
            S R   + +  A+ + F  Y+  +  D + C  RN H R++ DI ++   +  TP+H+I+
Sbjct: 1659 SLRTLNEFYCHAKDSNFVPYIVDLHCDLETCLGRNSHQRSVNDIRVVLDNWCQTPTHYIK 1718

Query: 430  LDPTTLLQSAAITDVHMEDVQ 492
            LD ++LL++     V MEDV+
Sbjct: 1719 LDVSSLLENV----VEMEDVE 1735


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,760,250
Number of Sequences: 53049
Number of extensions: 637306
Number of successful extensions: 1879
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1878
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)