Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021260X
         (428 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   3.8  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   5.0  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   5.0  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   5.0  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   6.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   6.6  

>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 330 DRTYEYHHHGHAEFGRQHVRYPMIRPGLVTS 238
           +  +++ H+G A    Q  R    RPG+VT+
Sbjct: 22  EHPHQHQHYGAAVQVPQGGRRRAARPGVVTT 52


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 138 PVRVQGAHTSGPGQ*CSRFYVQELEAAL 221
           PVR+ G H  G    C++      E AL
Sbjct: 196 PVRIMGVHRPGFDNDCNKNTSTSKEIAL 223


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +3

Query: 66  IGSPTFSVGVFRKERDGAGCSQAPPVRVQGAHTSGP 173
           +G P +  G   K  + +  S  PP+ + GA  +GP
Sbjct: 287 LGIPAY--GRAWKMDEDSSISGVPPLSIDGALEAGP 320


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 7/15 (46%), Positives = 7/15 (46%)
 Frame = +2

Query: 269 YRTCCRPNSACPWWW 313
           YR C RP      WW
Sbjct: 256 YRYCYRPYPVYNQWW 270


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +2

Query: 251 PGRIMGYRTCCRPNSACPW 307
           PG  +  +TC R  +  PW
Sbjct: 506 PGETINLQTCVRCPNNYPW 524


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 336 HPDRTYEYHHHGH 298
           HP  T+ YH + H
Sbjct: 158 HPGMTFRYHFNVH 170


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,185
Number of Sequences: 336
Number of extensions: 2182
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9460170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)