Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021260X
(428 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 122 1e-28
07_01_0578 + 4295386-4296489,4297394-4297507 119 9e-28
10_02_0199 + 6668902-6669293,6669825-6669882 34 0.042
04_01_0208 + 2596110-2596928 31 0.52
02_05_0197 - 26641356-26642188,26642312-26642398,26643373-266434... 31 0.52
05_03_0163 + 9070781-9071320 30 0.69
03_01_0123 + 965657-966214,967827-967995,968632-969236,969333-96... 30 0.91
02_02_0147 - 7176478-7176832,7177006-7177334 30 0.91
12_02_0030 + 12469707-12469902,12470337-12470658,12472208-124722... 29 1.6
12_01_0073 + 613316-613447,613611-613802,614067-614232,614460-61... 29 1.6
07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298,389... 29 1.6
07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988 29 2.1
12_02_0634 + 21416205-21416954 28 2.8
08_02_1329 - 26182762-26183007,26183149-26183249,26183533-261836... 28 2.8
10_01_0359 + 3956527-3956616,3957623-3957818,3958102-3959418,395... 28 3.7
08_02_1285 - 25881091-25881798 28 3.7
04_03_0126 + 11524567-11524967,11525113-11525647,11525669-11526043 28 3.7
10_08_0219 - 15972061-15972110,15972411-15972632,15972673-15972955 27 4.9
06_03_0186 - 17653101-17653205,17653594-17653660,17654744-176548... 27 4.9
05_06_0065 - 25303143-25303769,25303868-25304758,25305096-253052... 27 4.9
04_04_1660 - 35140641-35141894 27 4.9
01_05_0564 + 23312419-23312987,23314652-23314751,23314832-233150... 27 4.9
01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149 27 4.9
05_05_0142 - 22673607-22674134 27 6.4
12_02_0828 - 23502276-23503472,23503568-23504002,23504097-235042... 27 8.5
11_01_0072 + 570345-570476,570640-570831,571095-571260,571487-57... 27 8.5
10_07_0130 + 13241085-13241151,13241268-13241339,13242458-132428... 27 8.5
10_07_0029 + 12031711-12032464,12044289-12044386 27 8.5
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 27 8.5
06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411... 27 8.5
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 27 8.5
02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,121... 27 8.5
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 122 bits (294), Expect = 1e-28
Identities = 52/58 (89%), Positives = 55/58 (94%)
Frame = +3
Query: 255 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRR 428
AESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHRRVN+R RR
Sbjct: 67 AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRRVNIRLRR 124
Score = 61.7 bits (143), Expect = 2e-10
Identities = 32/63 (50%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +1
Query: 67 SVARPLVSVYS-EKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 243
+ ARPLVSV + E A +P V +APIRPD+V H +S N RQPY VS+ AG
Sbjct: 3 AAARPLVSVKALEGDMATDSAGIQMPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAG 62
Query: 244 HQT 252
HQT
Sbjct: 63 HQT 65
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 119 bits (287), Expect = 9e-28
Identities = 50/58 (86%), Positives = 54/58 (93%)
Frame = +3
Query: 255 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRR 428
AESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WR+WHRRVN+ RR
Sbjct: 68 AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKTWRKWHRRVNVHLRR 125
Score = 59.7 bits (138), Expect = 1e-09
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Frame = +1
Query: 76 RPLVSVYSEKSE--TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 249
RPLVSV + + + T ++ L VF+AP+RPD+V VH +S N RQPY VS+ AGHQ
Sbjct: 6 RPLVSVKALEGDMATDNSSSLALAEVFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQ 65
Query: 250 T 252
T
Sbjct: 66 T 66
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 34.3 bits (75), Expect = 0.042
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = +3
Query: 225 REQGGWSPNQAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 365
RE GG A+SW TGRA A + R R GG R A N G R
Sbjct: 30 REGGGG----AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>04_01_0208 + 2596110-2596928
Length = 272
Score = 30.7 bits (66), Expect = 0.52
Identities = 21/69 (30%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
Frame = +3
Query: 225 REQGGWSPNQAESWGTGRAVARIPRVRGGGTHRSGQGAF-GNMCRGGRMFAPTKP-WRRW 398
R +GG + E GR GGG + A G R +P WRRW
Sbjct: 118 RGRGGGCEAEGEDGAAGRRSGEEGEAAGGGRRGGKRRAMAGTRLRRSPCETEGRPGWRRW 177
Query: 399 HRRVNLRQR 425
RR R+R
Sbjct: 178 RRRWRRRRR 186
>02_05_0197 - 26641356-26642188,26642312-26642398,26643373-26643452,
26643948-26644120,26644227-26644308,26644623-26644758,
26644777-26644833,26644905-26645120,26645939-26646335,
26646458-26646544,26647063-26647324,26648892-26648972,
26649176-26650350
Length = 1221
Score = 30.7 bits (66), Expect = 0.52
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +3
Query: 225 REQGGWSPNQAESWGTGRAVARIPRVRGGGT--HRSGQGAF 341
R + GW +QA+ + + R P +GGG R GQG F
Sbjct: 1121 RREQGWDAHQAQVGAQHQNLPRFPPQQGGGNIGERQGQGQF 1161
>05_03_0163 + 9070781-9071320
Length = 179
Score = 30.3 bits (65), Expect = 0.69
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +3
Query: 225 REQGGWSPNQAESWGTGRAVARIPRVRGGGTHRSGQG 335
R GGWS +AE WG G ++ GGG RS +G
Sbjct: 15 RGAGGWS-QRAEGWGGGGGRSQRAEGGGGGGGRSRRG 50
>03_01_0123 +
965657-966214,967827-967995,968632-969236,969333-969434
Length = 477
Score = 29.9 bits (64), Expect = 0.91
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 210 EAALLREQGGWSPNQAESWGTGRAV 284
EAALLR G W+ + WG G V
Sbjct: 367 EAALLRAAGDWARGAGQRWGVGDVV 391
>02_02_0147 - 7176478-7176832,7177006-7177334
Length = 227
Score = 29.9 bits (64), Expect = 0.91
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +3
Query: 225 REQGGWSPNQAESWGTGRAV-ARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 401
R+ GGWS A + G G V +R P + G G G R + P + RR
Sbjct: 88 RQHGGWSTETAAAGGCGNGVHSRRPHLAGVVAIGGVGGQLGAERRSRWQWRPVRRKRRGR 147
Query: 402 RR 407
RR
Sbjct: 148 RR 149
>12_02_0030 +
12469707-12469902,12470337-12470658,12472208-12472245,
12472486-12473573
Length = 547
Score = 29.1 bits (62), Expect = 1.6
Identities = 17/61 (27%), Positives = 24/61 (39%)
Frame = +3
Query: 246 PNQAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQR 425
P + G G A + RV GGG+ G+GA + G + W R +R
Sbjct: 77 PERRRQEGAGGRGAGVRRVEGGGSGAVGEGARAAVLGGAATIGARRLWAGGAARGGFGRR 136
Query: 426 R 428
R
Sbjct: 137 R 137
>12_01_0073 +
613316-613447,613611-613802,614067-614232,614460-614845
Length = 291
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 66 IGSPTFSVGVFRKERDGAGCSQAPPVRVQGAHTSGPGQ*CSRF 194
I +PTF +G K G S + + GAHT G + C F
Sbjct: 135 IPAPTFDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>07_01_0524 +
3892340-3894625,3894995-3895109,3895204-3895298,
3895929-3896167,3896524-3896610,3896967-3897066,
3897908-3898115,3898224-3899422
Length = 1442
Score = 29.1 bits (62), Expect = 1.6
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Frame = +3
Query: 201 QELEAALLREQGGWSPNQAESWGTGRAVAR--IPRVRGGGTHRSGQGAFGNMCR---GGR 365
+++ A ++GG S ++++ G++V + + R+R H G G+ G++ + GG+
Sbjct: 64 EKVSGAKSTDEGGGS-DKSKGSEVGKSVLQPDVKRIRTEAAHGGGSGSGGSVSKDGTGGK 122
Query: 366 MFAPTKP-WR 392
M P P WR
Sbjct: 123 MLRPGFPKWR 132
>07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988
Length = 292
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +3
Query: 75 PTFSVGVFRKERDGAGCSQAPPVRVQGAHTSGPGQ*CSRF 194
P+F V G SQA V + GAHT G Q C F
Sbjct: 137 PSFDVANLTASFAAKGLSQADMVALSGAHTVGQAQ-CQNF 175
>12_02_0634 + 21416205-21416954
Length = 249
Score = 28.3 bits (60), Expect = 2.8
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +3
Query: 306 GGGTHRSGQGAFGNMCRGGRMFAPTKP-WRRWHRRVNLRQR 425
GG + G RG KP WRRW RR R+R
Sbjct: 180 GGRLGEKRRATAGRQLRGSPRETEGKPGWRRWRRRWRRRRR 220
>08_02_1329 -
26182762-26183007,26183149-26183249,26183533-26183602,
26183692-26183895,26186435-26186941,26188672-26188677
Length = 377
Score = 28.3 bits (60), Expect = 2.8
Identities = 23/83 (27%), Positives = 34/83 (40%)
Frame = +3
Query: 108 RDGAGCSQAPPVRVQGAHTSGPGQ*CSRFYVQELEAALLREQGGWSPNQAESWGTGRAVA 287
R AG + PP R G TSG G S + V+ + +S + + S+G G
Sbjct: 100 RHAAGGGETPPARRGGGRTSGGGG--SSYSVEHSPSP--SPLHPYSDSGSGSYGGGLVAN 155
Query: 288 RIPRVRGGGTHRSGQGAFGNMCR 356
+ GGG R + N+ R
Sbjct: 156 SRAKGGGGGAPRGNETVIPNIIR 178
>10_01_0359 +
3956527-3956616,3957623-3957818,3958102-3959418,
3959482-3960445,3960588-3960648,3961500-3961946
Length = 1024
Score = 27.9 bits (59), Expect = 3.7
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 381 SWGRTYVHHDTCYRRHPDRTYEYHH 307
SWGR H D RR P R+ +HH
Sbjct: 303 SWGRD--HADNRLRRSPSRSSNFHH 325
>08_02_1285 - 25881091-25881798
Length = 235
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 102 KERDGAGCSQAPPVRVQGAHTSGPG 176
+E DG G ++A V +GAH +G G
Sbjct: 173 EEEDGEGSAEAMEVEEEGAHLAGAG 197
>04_03_0126 + 11524567-11524967,11525113-11525647,11525669-11526043
Length = 436
Score = 27.9 bits (59), Expect = 3.7
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = -3
Query: 285 RQHVRYPMIRPGLVTSLLAHAVGLPRVLGHRNVNIIDQVRTYGRL 151
++HV +P G + L+ A L R+L H + ++ R L
Sbjct: 5 KKHVLFPFTSKGHIAGFLSLASRLHRILPHATITLVSTPRNVAAL 49
>10_08_0219 - 15972061-15972110,15972411-15972632,15972673-15972955
Length = 184
Score = 27.5 bits (58), Expect = 4.9
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 234 GGWSPNQAESWGTGRAVARIPRVRGGGTHRSGQGAFG 344
GG N WG+G + + GGG + SG G G
Sbjct: 38 GGGGSNGGSGWGSGSG-SGYGQASGGGAYASGGGGAG 73
>06_03_0186 -
17653101-17653205,17653594-17653660,17654744-17654898,
17655759-17655995
Length = 187
Score = 27.5 bits (58), Expect = 4.9
Identities = 16/58 (27%), Positives = 20/58 (34%)
Frame = +3
Query: 234 GGWSPNQAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRR 407
GG P+ + W RA + G G G G G +P RR RR
Sbjct: 21 GGADPDDDDEWAAMRASSLPDPAAGAGAAGGGSGESGGGAANPAQARRRRPRRRQRRR 78
>05_06_0065 -
25303143-25303769,25303868-25304758,25305096-25305202,
25305518-25305629
Length = 578
Score = 27.5 bits (58), Expect = 4.9
Identities = 19/71 (26%), Positives = 27/71 (38%)
Frame = +1
Query: 61 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 240
S + PL + S KS + ++ LP V P + +HV K S P C S+
Sbjct: 498 SRDMVPPLPPLPSMKSPSESWLSRALPSVSSNPPATSFLG-IHVQHKKQSPPPRCSSRAP 556
Query: 241 GHQTRPNHGVP 273
H P
Sbjct: 557 AKLVADGHARP 567
>04_04_1660 - 35140641-35141894
Length = 417
Score = 27.5 bits (58), Expect = 4.9
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 234 GGWSPNQAESWGTGRAVARIPRVRGGGTHR 323
GGW+P + +WG + + PR+ G R
Sbjct: 255 GGWAPVERSAWGDVFEILKRPRLLAGAGGR 284
>01_05_0564 +
23312419-23312987,23314652-23314751,23314832-23315055,
23315212-23316041,23316161-23316275,23316786-23316905,
23317410-23317450,23317546-23317595,23317684-23317719,
23317836-23317856
Length = 701
Score = 27.5 bits (58), Expect = 4.9
Identities = 23/61 (37%), Positives = 27/61 (44%)
Frame = +3
Query: 156 AHTSGPGQ*CSRFYVQELEAALLREQGGWSPNQAESWGTGRAVARIPRVRGGGTHRSGQG 335
A T+G G YV + + ALL E + E GRA RI RG G GQG
Sbjct: 35 AETAGSGD--DEEYVSDPDDALLPEMRRREASDDEGSEEGRA--RIGSDRGDGDDGDGQG 90
Query: 336 A 338
A
Sbjct: 91 A 91
>01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149
Length = 248
Score = 27.5 bits (58), Expect = 4.9
Identities = 10/17 (58%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
Frame = -3
Query: 324 TYEYHH-HGHAEFGRQH 277
T+++HH HGH FGR H
Sbjct: 144 THDHHHGHGHHLFGRDH 160
>05_05_0142 - 22673607-22674134
Length = 175
Score = 27.1 bits (57), Expect = 6.4
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +3
Query: 240 WSPNQAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRR 407
W P SW G A AR+ + GG R +G RG + + RRW R
Sbjct: 68 WIPTS--SWEVGDA-ARMTALMVGGAGRRREGRGRGRWRGRAAYTRGRRGRRWRGR 120
>12_02_0828 -
23502276-23503472,23503568-23504002,23504097-23504213,
23505330-23505396,23505685-23505725,23506161-23506237,
23506699-23506945
Length = 726
Score = 26.6 bits (56), Expect = 8.5
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 306 GGGTHRSGQGAFGNMCRGGRMFAPTKP 386
GGG +G GA RGG AP +P
Sbjct: 49 GGGGGGAGAGAARRRARGGARAAPARP 75
>11_01_0072 +
570345-570476,570640-570831,571095-571260,571487-571872
Length = 291
Score = 26.6 bits (56), Expect = 8.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 66 IGSPTFSVGVFRKERDGAGCSQAPPVRVQGAHTSGPGQ*CSRF 194
I +PT +G K G S + + GAHT G + C F
Sbjct: 135 IPAPTLDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>10_07_0130 + 13241085-13241151,13241268-13241339,13242458-13242862,
13243057-13243112,13244116-13244274,13244379-13244498,
13244591-13245361,13245902-13246078,13246192-13246669,
13247502-13248094
Length = 965
Score = 26.6 bits (56), Expect = 8.5
Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +3
Query: 210 EAALLREQGG-WSPNQAE-SWGTGRAVARIPRVRGGGTHRSG 329
EAAL E GG W+ E G RA A PR G SG
Sbjct: 916 EAALSPESGGRWAGPAVELGGGDARAAAAEPRGHGNNLRHSG 957
>10_07_0029 + 12031711-12032464,12044289-12044386
Length = 283
Score = 26.6 bits (56), Expect = 8.5
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 366 YVHHDTCYRRHPDR 325
Y+ HDT YR HP R
Sbjct: 94 YIFHDTAYRYHPRR 107
>07_03_0329 +
16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 26.6 bits (56), Expect = 8.5
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 234 GGWSPNQAESWGTGRAVARIPRVRGGGTHRSGQGAFGN 347
GG+ + +G GR RGGG R G+G G+
Sbjct: 169 GGYHGDGEAGYGRGRGGRDYDGGRGGGGRRGGRGGGGS 206
>06_03_0867 +
25534760-25539620,25540662-25540857,25540957-25541104,
25541673-25541751,25542151-25542238,25542330-25542600,
25542676-25542718,25542801-25542904,25543374-25543790
Length = 2068
Score = 26.6 bits (56), Expect = 8.5
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 360 HHDTCYRRHPDRTYEYHHHGH 298
HH + HP ++HHH H
Sbjct: 62 HHHHHHHHHPPPRVQHHHHHH 82
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 26.6 bits (56), Expect = 8.5
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = -3
Query: 375 GRTYVHHDTCYRRHPDRTYEYHHH---GHAEFGRQH 277
GR + HH RH ++HHH GH + R H
Sbjct: 533 GRHHRHHHDHRHRHGHSHGDHHHHYHGGHHQRRRHH 568
>02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,
1216413-1216738,1216860-1217013,1217377-1217438,
1218078-1218133,1219456-1221279,1221775-1222698,
1222855-1222866
Length = 1242
Score = 26.6 bits (56), Expect = 8.5
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +3
Query: 225 REQGGWSPNQAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 365
R+ GG S G+GR R RG R G G GGR
Sbjct: 1176 RQGGGRSGYSGRGGGSGRGGGGYQRDRGSQGSRGGYGGGSRFQDGGR 1222
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,829,580
Number of Sequences: 37544
Number of extensions: 296929
Number of successful extensions: 1149
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1141
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 802495716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -