Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021260X
         (428 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   1.4  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   1.9  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   3.3  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   3.3  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   5.8  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   5.8  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   5.8  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   7.7  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 214 QPYCVSKEAGHQTRPNHGVPDV 279
           QP  V+++     +P HG P V
Sbjct: 259 QPVTVNRQLNSDVQPGHGSPPV 280


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 315 YHHHGHAEFGRQHVRY 268
           +HHH H     QH+ Y
Sbjct: 351 HHHHHHQTQSLQHLHY 366


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 327 GQGAFGNMCRGGRMFAP 377
           G G FG++CRG     P
Sbjct: 640 GGGEFGDVCRGKLKLPP 656


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/23 (39%), Positives = 10/23 (43%), Gaps = 1/23 (4%)
 Frame = -3

Query: 360 HHDTCYRRHPD-RTYEYHHHGHA 295
           HH T    H       +HHH HA
Sbjct: 415 HHHTMGHGHSHIHATPHHHHSHA 437


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 7/17 (41%), Positives = 8/17 (47%)
 Frame = +2

Query: 254 GRIMGYRTCCRPNSACP 304
           GR      CCR +  CP
Sbjct: 50  GRFKHTDACCRTHDMCP 66


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 7/17 (41%), Positives = 8/17 (47%)
 Frame = +2

Query: 254 GRIMGYRTCCRPNSACP 304
           GR      CCR +  CP
Sbjct: 55  GRFKHTDACCRTHDMCP 71


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 7/17 (41%), Positives = 8/17 (47%)
 Frame = +2

Query: 254 GRIMGYRTCCRPNSACP 304
           GR      CCR +  CP
Sbjct: 55  GRFKHTDACCRTHDMCP 71


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 375 GRTYVHHDTCYRRHPDRTYE 316
           G T +HH   Y R   + YE
Sbjct: 151 GGTTLHHGMAYHRGHRKDYE 170


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,148
Number of Sequences: 438
Number of extensions: 2356
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11121030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)