Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021259
         (589 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding pr...    23   0.30 
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         26   1.0  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         26   1.0  
AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    25   1.8  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   2.4  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    24   3.2  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   7.3  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   9.7  
AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    23   9.7  

>AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding
           protein AgamOBP43 protein.
          Length = 333

 Score = 23.4 bits (48), Expect(2) = 0.30
 Identities = 8/23 (34%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
 Frame = -2

Query: 339 CFHLHHGSMHKTNQ--PRTVMHI 277
           C+H H+G + KT++  P+T + +
Sbjct: 142 CYHQHYGYLRKTDRYVPKTPLEM 164



 Score = 22.6 bits (46), Expect(2) = 0.30
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -2

Query: 513 APVDPTSYQACVHVACSMLSYHQEY 439
           A ++P+    C     S L YHQ Y
Sbjct: 123 AALEPSVTDVCERAHRSFLCYHQHY 147


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -2

Query: 480 VHVACSMLSYHQEYVHPWHHDHAVLEPAH 394
           +H A  +L Y Q  +HP HH  A+L PA+
Sbjct: 166 IHPAV-LLPYPQHVLHPAHHP-ALLHPAY 192


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -2

Query: 480 VHVACSMLSYHQEYVHPWHHDHAVLEPAH 394
           +H A  +L Y Q  +HP HH  A+L PA+
Sbjct: 166 IHPAV-LLPYPQHVLHPAHHP-ALLHPAY 192


>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +1

Query: 64  LNIVNYDVGTRTAGRRPMRFISPIIQDNPTGWGPY 168
           + I  Y  G R  G   +  + PI  D P+  GPY
Sbjct: 302 VGIATYGRGWRLVGDSGITGVPPIPADGPSPAGPY 336


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
 Frame = -2

Query: 516 GAPVDPTSYQACV-HVACSMLSYHQEYVHPWHHDH 415
           G+P DPT     + H A       Q+ +H  HH H
Sbjct: 132 GSPPDPTRNGIVLHHQAHQQQQQQQQQLHHHHHHH 166


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 10/25 (40%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
 Frame = -2

Query: 450 HQEYVHP-WHHDHAVLEPAHADMTG 379
           H  + HP  HH H    P  AD+ G
Sbjct: 496 HSHHAHPHHHHHHHHHHPTAADLAG 520


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = -2

Query: 354 PPGERCFHLHHGSMHKTNQPRTVMH 280
           P G    HLHH   H   QP    H
Sbjct: 811 PVGAGSHHLHHLHHHAAQQPPPGSH 835


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -2

Query: 501 PTSYQACVHVACSMLSYHQEYVHPWH 424
           P+SY    H   S   +H  + HP H
Sbjct: 169 PSSYHQQQHPGHSQHHHHHHHHHPHH 194


>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 210 EWLIGHVPKLVWHL 169
           E+++GH P L W L
Sbjct: 525 EFMLGHRPNLYWRL 538


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,313
Number of Sequences: 2352
Number of extensions: 14922
Number of successful extensions: 77
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 77
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)