Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021258
         (646 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            33   0.010
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    30   0.055
AY070234-1|AAL58538.1|  223|Anopheles gambiae glutathione S-tran...    26   1.2  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   4.7  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 32.7 bits (71), Expect = 0.010
 Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
 Frame = +2

Query: 245 ETYCTWCAES-KTPLKYVLPTENGKKEFCSETCLSEFRQAYSKGA--C------LHCDTV 397
           E  C WC +   +    +L T  G   FC+E C S+ R+A  K A  C       H  + 
Sbjct: 201 EQTCQWCRKVIPSHQTGILGTTEGMI-FCTEACFSQSRRASFKRAKTCDWCRHVRHAVSY 259

Query: 398 IRGNVPSSSKNFCSTHCLNIYQ 463
           +     +S   FCS  CLN Y+
Sbjct: 260 VDFQDGASQLQFCSDKCLNQYK 281


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 30.3 bits (65), Expect = 0.055
 Identities = 18/66 (27%), Positives = 27/66 (40%)
 Frame = +2

Query: 251 YCTWCAESKTPLKYVLPTENGKKEFCSETCLSEFRQAYSKGACLHCDTVIRGNVPSSSKN 430
           +CT+ +  K  L   +    G+K +  + C + F Q+ S  A      V  GN P     
Sbjct: 244 HCTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSNSLKAHKMIHQV--GNKPVFQCK 301

Query: 431 FCSTHC 448
            C T C
Sbjct: 302 LCPTTC 307


>AY070234-1|AAL58538.1|  223|Anopheles gambiae glutathione
           S-transferase E3 protein.
          Length = 223

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 12/47 (25%), Positives = 24/47 (51%)
 Frame = +3

Query: 372 ARVYIVTQLYAVMYLRAAKISALRIV*TFIRRKMKNVPHHHSLETDK 512
           A + + T L  +  L  A  S   +V  +++R  + +PH+  + TD+
Sbjct: 162 ADISVSTSLCTLNALFPADASKYPLVLAYLKRLEQTMPHYQEINTDR 208


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -1

Query: 244  GGIPGPRILPGAG 206
            GG+PG  ++PG+G
Sbjct: 3217 GGVPGVAVVPGSG 3229


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,411
Number of Sequences: 2352
Number of extensions: 14804
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)