Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021258
         (646 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   3.3  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    23   3.3  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   4.4  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   4.4  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   4.4  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   7.7  

>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 464 KKNEKRTTSPQSGNGQTEL 520
           KK  K   +P SG+G TE+
Sbjct: 326 KKENKSKGTPGSGDGDTEI 344


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 437 STHCLNIYQKKNEKRTTSPQSGNGQTELK 523
           +THC+N  Q  N + T +    N +   K
Sbjct: 411 NTHCVNNNQNDNIQNTNNQNDNNQKNNKK 439


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 241 GIPGPRILPGAGPDEPTVLFDI 176
           G+  PR++  +G   PTVL ++
Sbjct: 629 GLEPPRVILSSGAKSPTVLEEL 650


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 241 GIPGPRILPGAGPDEPTVLFDI 176
           G+  PR++  +G   PTVL ++
Sbjct: 629 GLEPPRVILSSGAKSPTVLEEL 650


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 241 GIPGPRILPGAGPDEPTVLFDI 176
           G+  PR++  +G   PTVL ++
Sbjct: 629 GLEPPRVILSSGAKSPTVLEEL 650


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 302 TENGKKEFCSETCLSEFRQAYSK 370
           T+NG K   SET + E  Q  +K
Sbjct: 230 TKNGMKTLLSETDIWEVEQILAK 252


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,503
Number of Sequences: 438
Number of extensions: 3742
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)