Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021257
(844 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 25 0.66
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 25 0.66
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 3.5
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 6.2
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 6.2
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 6.2
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 6.2
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 6.2
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 6.2
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 6.2
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 6.2
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 6.2
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 6.2
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 8.1
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 22 8.1
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 25.4 bits (53), Expect = 0.66
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = -2
Query: 816 TMVCNNGVVLTGKHCFCSFICHHCREYE 733
++ C G++ + C ++C C EYE
Sbjct: 450 SLPCEPGMIKKQQGDTCCWVCDQCEEYE 477
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 25.4 bits (53), Expect = 0.66
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = -2
Query: 816 TMVCNNGVVLTGKHCFCSFICHHCREYE 733
++ C G++ + C ++C C EYE
Sbjct: 540 SLPCEPGMIKKQQGDTCCWVCDQCEEYE 567
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 23.0 bits (47), Expect = 3.5
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +3
Query: 594 WVRVEWREVEGLWVWGFYG 650
W+++EW +V W YG
Sbjct: 75 WLKLEWNDVNMRWNVSDYG 93
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 22.2 bits (45), Expect = 6.2
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = -1
Query: 595 HVIWAIWITTVWVSILKIICRASE 524
H++W W+ ++ +I + CR E
Sbjct: 470 HLVWNSWMPSIRGAIQQWTCRQPE 493
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 488 FRLERHFDPQTGLRSST 538
FR R D +TGLRS T
Sbjct: 15 FRQSRSEDSETGLRSRT 31
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 488 FRLERHFDPQTGLRSST 538
FR R D +TGLRS T
Sbjct: 15 FRQSRSEDSETGLRSRT 31
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 488 FRLERHFDPQTGLRSST 538
FR R D +TGLRS T
Sbjct: 15 FRQSRSEDSETGLRSRT 31
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 488 FRLERHFDPQTGLRSST 538
FR R D +TGLRS T
Sbjct: 15 FRQSRSEDSETGLRSRT 31
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 488 FRLERHFDPQTGLRSST 538
FR R D +TGLRS T
Sbjct: 15 FRQSRSEDSETGLRSRT 31
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 488 FRLERHFDPQTGLRSST 538
FR R D +TGLRS T
Sbjct: 15 FRQSRSEDSETGLRSRT 31
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.2 bits (45), Expect = 6.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 488 FRLERHFDPQTGLRSST 538
FR R D +TGLRS T
Sbjct: 15 FRQSRSEDSETGLRSRT 31
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 488 FRLERHFDPQTGLRSST 538
FR R D +TGLRS T
Sbjct: 15 FRQSRSEDSETGLRSRT 31
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 22.2 bits (45), Expect = 6.2
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -3
Query: 158 RAFANLNDYRLTTDSLALDDTKHCVLSHLCKS 63
+ F NL + +L + L+D KH H K+
Sbjct: 201 KMFCNLENVKLKELRIILEDIKHINTRHNTKN 232
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.8 bits (44), Expect = 8.1
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 495 SLKIAFLILTSQVHPVRRKVILLGHF 418
SL + FL+L + P V LLG F
Sbjct: 281 SLTVFFLLLAEIIPPTSLVVPLLGKF 306
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 21.8 bits (44), Expect = 8.1
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +3
Query: 21 IERILLKSGFYNTMR 65
++ ILLKSG Y+ +R
Sbjct: 612 VKGILLKSGLYHVLR 626
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,889
Number of Sequences: 438
Number of extensions: 4937
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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