Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021256
         (715 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   3.3  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   4.3  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   5.7  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   7.5  

>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -3

Query: 263 QFPSQRKCTKQSFVSKSFLQPFFRVYTETQILVKFCANCV 144
           QF   +  T  +FVS  F  PF+       +LV+   + +
Sbjct: 348 QFEMTQNSTNINFVSTFFKIPFYSTLRPINLLVQIILDVI 387


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -1

Query: 334 FRTSWPRGDFVAPPDLSQNSNFEHNFLRSENVQNS 230
           F  ++    F+A  D  +N N EHN+  +  + +S
Sbjct: 15  FYQNYKTNPFLAS-DCDKNQNTEHNYTHNNEMYHS 48


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +2

Query: 479 YIFVLQWISFKETSRNKNKIWIKCRVRFAYMMSTAI-MHQSALHD 610
           Y  V++W   ++ S   N +WIK    +   +S    +H++ L D
Sbjct: 178 YDAVIKWSPNEDYSCEYNLVWIKEESIYEERISVVSGLHEATLTD 222


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
 Frame = -2

Query: 222 FEKFFTTFFSRLYG----NTNFGQILRELRQS*LLQYKLFCSYRLYTPKSFYSSCINRKI 55
           F  F+  F  + Y     N    + L E  ++ L    + CS     PK  +    NR+ 
Sbjct: 32  FPNFYNDFEVQRYTWKCENQKCVKYLVEDEETSLATCNMLCSEPAIWPKPVHIKLTNRES 91

Query: 54  SIINRS 37
           SII+++
Sbjct: 92  SIIDKT 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,412
Number of Sequences: 336
Number of extensions: 3664
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)