Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021255
(760 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21167| Best HMM Match : KH_1 (HMM E-Value=0) 62 4e-10
SB_24937| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_19761| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.58
SB_35585| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044) 31 0.77
SB_21567| Best HMM Match : RVT_1 (HMM E-Value=6.4e-18) 30 2.3
SB_16657| Best HMM Match : RVT_1 (HMM E-Value=6.4e-18) 30 2.3
SB_56818| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19) 29 3.1
SB_50945| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_49359| Best HMM Match : rve (HMM E-Value=5.5e-37) 29 3.1
SB_42176| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 29 3.1
SB_40370| Best HMM Match : rve (HMM E-Value=1.3e-37) 29 3.1
SB_22156| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_15656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_9072| Best HMM Match : RVT_1 (HMM E-Value=3.4e-18) 29 3.1
SB_56354| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19) 29 3.1
SB_49147| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19) 29 3.1
SB_39602| Best HMM Match : rve (HMM E-Value=1.4e-38) 29 3.1
SB_37359| Best HMM Match : RVT_1 (HMM E-Value=3.5e-18) 29 3.1
SB_26926| Best HMM Match : DUF104 (HMM E-Value=9.7) 29 3.1
SB_21706| Best HMM Match : RVT_1 (HMM E-Value=6.6e-19) 29 3.1
SB_18495| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_9047| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19) 29 3.1
SB_25863| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_51785| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_38532| Best HMM Match : CRAM_rpt (HMM E-Value=2.1e-29) 28 9.5
>SB_21167| Best HMM Match : KH_1 (HMM E-Value=0)
Length = 1650
Score = 62.5 bits (145), Expect = 4e-10
Identities = 33/86 (38%), Positives = 50/86 (58%)
Frame = +3
Query: 489 KAERCSRARRQILTHFQQQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINVPGISD 668
K + ++ARR +L+ Q QA +I IP+EH+++ILGK G+ L+ +E TATKI +P D
Sbjct: 176 KPDTVAKARRLVLSQLQTQAQIEIQIPREHHKFILGKGGKTLQTMELSTATKITMP--RD 233
Query: 669 NSXXXXXXXXXXXXXXAEHEIRVCSE 746
S A HEI++ S+
Sbjct: 234 GSDTIKIIGTKEGVDRARHEIQLISD 259
Score = 57.6 bits (133), Expect = 1e-08
Identities = 32/68 (47%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Frame = +1
Query: 307 VGSSLHTQVFHVPYEER--KLDNANTFGEGESLRTCHSITKDTGAHIEISTSKDGSLTFL 480
+ S+ TQVF VP EER KL + TFG+ C I TGA IE+S KD SLT +
Sbjct: 113 IRSTTVTQVFRVPLEERRYKLFHEATFGDERQHSICRDIMAKTGASIEVSLGKDLSLTIM 172
Query: 481 ITGKQSAV 504
+TGK V
Sbjct: 173 VTGKPDTV 180
Score = 31.5 bits (68), Expect = 0.77
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +3
Query: 495 ERCSRARRQILTHFQQQAS---KQISIPKEHYRWILGKQGQKLKELEKVTATKINVPGIS 665
E RAR +I QQA ++++IPK + +I G + +++ T IN+P S
Sbjct: 245 EGVDRARHEIQLISDQQAKLAFERLAIPKTFHPFISGPNNETANRIKEQTGAAINIPPPS 304
Query: 666 DN 671
N
Sbjct: 305 VN 306
>SB_24937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 589
Score = 33.9 bits (74), Expect = 0.14
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 549 SKQISIPKEHYRWILGKQGQKLKELEKVTATKINVP 656
S QI I +H+ +I+GK G +K + + T +N P
Sbjct: 471 SMQIDIAPQHHLFIIGKNGANIKHITQQTGASVNFP 506
>SB_19761| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 31.9 bits (69), Expect = 0.58
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +1
Query: 331 VFHVPYEERKLDNANTFGEGESLRTCHSITKDTGAHIEISTSKDGSLTF 477
VF V + E++ N+ TFG+ R C KD+ A TSK LT+
Sbjct: 33 VFSVKFHEKR-SNSTTFGQIPPSRQCTDAMKDSLASALRHTSKQAQLTY 80
>SB_35585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 31.5 bits (68), Expect = 0.77
Identities = 12/58 (20%), Positives = 30/58 (51%)
Frame = +3
Query: 498 RCSRARRQILTHFQQQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINVPGISDN 671
RC R + ++T + +I +P++ +++GK G+ +K ++ + ++ DN
Sbjct: 198 RCQRGK-DLVTDLLTEKELEIPVPRDVVGFVIGKGGETIKRIQAESGARVQFNPAKDN 254
>SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044)
Length = 933
Score = 31.5 bits (68), Expect = 0.77
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 179 VEEMNNVGYENNVSFAYDDLFPALPLPSPLCNVIYNRLQTNFEL 310
++ + + + V FA D +FP LP P+ NR T FEL
Sbjct: 731 IKNFHCISCDKPVEFARDGMFPPLPSAQPMPGKKSNRPYTTFEL 774
>SB_21567| Best HMM Match : RVT_1 (HMM E-Value=6.4e-18)
Length = 296
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = -3
Query: 584 TIMLLRD*DLFTGLLLKMGQN---LSPRSRTALCFPVIRKV-RLPSLLVDISMCAPVSLV 417
T+ + D +FT L L M + LSP SR F + R LL ++M
Sbjct: 144 TLQEISDAKIFTKLDLNMAFHQIELSPESRDITTFAASTGLYRYCRLLFGVNMATEKFQN 203
Query: 416 MEWQVLKDSP 387
+ WQVLKD P
Sbjct: 204 LIWQVLKDCP 213
>SB_16657| Best HMM Match : RVT_1 (HMM E-Value=6.4e-18)
Length = 1138
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = -3
Query: 584 TIMLLRD*DLFTGLLLKMGQN---LSPRSRTALCFPVIRKV-RLPSLLVDISMCAPVSLV 417
T+ + D +FT L L M + LSP SR F + R LL ++M
Sbjct: 481 TLQEISDAKIFTKLDLNMAFHQIELSPESRDITTFAASTGLYRYCRLLFGVNMATEKFQN 540
Query: 416 MEWQVLKDSP 387
+ WQVLKD P
Sbjct: 541 LIWQVLKDCP 550
>SB_56818| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19)
Length = 796
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = -3
Query: 584 TIMLLRD*DLFTGLLLKMGQN---LSPRSRTALCFPVIRKV-RLPSLLVDISMCAPVSLV 417
T+ + D +FT L L M + LSP SR F + R LL ++M
Sbjct: 365 TLQEISDAKIFTKLDLNMAFHQIELSPESRDITTFAAPTGLYRYCRLLFGVNMATEKFQN 424
Query: 416 MEWQVLKDSP 387
+ WQVLKD P
Sbjct: 425 LIWQVLKDCP 434
>SB_50945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 896
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = -3
Query: 584 TIMLLRD*DLFTGLLLKMGQN---LSPRSRTALCFPVIRKV-RLPSLLVDISMCAPVSLV 417
T+ + D +FT L L M + LSP SR F + R LL ++M
Sbjct: 4 TLQEISDAKIFTKLDLNMAFHQIELSPESRDITTFAAPTGLYRYCRLLFGVNMATEKFQN 63
Query: 416 MEWQVLKDSP 387
+ WQVLKD P
Sbjct: 64 LIWQVLKDCP 73
>SB_49359| Best HMM Match : rve (HMM E-Value=5.5e-37)
Length = 971
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = -3
Query: 584 TIMLLRD*DLFTGLLLKMGQN---LSPRSRTALCFPVIRKV-RLPSLLVDISMCAPVSLV 417
T+ + D +FT L L M + LSP SR F + R LL ++M
Sbjct: 449 TLQEISDAKIFTKLDLNMAFHQIELSPESRDITTFAAPTGLYRYCRLLFGVNMATEKFQN 508
Query: 416 MEWQVLKDSP 387
+ WQVLKD P
Sbjct: 509 LIWQVLKDCP 518
>SB_42176| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 612
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = -3
Query: 584 TIMLLRD*DLFTGLLLKMGQN---LSPRSRTALCFPVIRKV-RLPSLLVDISMCAPVSLV 417
T+ + D +FT L L M + LSP SR F + R LL ++M
Sbjct: 530 TLQEISDAKIFTKLDLNMAFHQIELSPESRDITTFAAPTGLYRYCRLLFGVNMATEKFQN 589
Query: 416 MEWQVLKDSP 387
+ WQVLKD P
Sbjct: 590 LIWQVLKDCP 599
>SB_40370| Best HMM Match : rve (HMM E-Value=1.3e-37)
Length = 1393
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = -3
Query: 584 TIMLLRD*DLFTGLLLKMGQN---LSPRSRTALCFPVIRKV-RLPSLLVDISMCAPVSLV 417
T+ + D +FT L L M + LSP SR F + R LL ++M
Sbjct: 575 TLQEISDAKIFTKLDLNMAFHQIELSPESRDITTFAAPTGLYRYCRLLFGVNMATEKFQN 634
Query: 416 MEWQVLKDSP 387
+ WQVLKD P
Sbjct: 635 LIWQVLKDCP 644
>SB_22156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1551
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = -3
Query: 584 TIMLLRD*DLFTGLLLKMGQN---LSPRSRTALCFPVIRKV-RLPSLLVDISMCAPVSLV 417
T+ + D +FT L L M + LSP SR F + R LL ++M
Sbjct: 765 TLQEISDAKIFTKLDLNMAFHQIELSPESRDITTFAAPTGLYRYCRLLFGVNMATEKFQN 824
Query: 416 MEWQVLKDSP 387
+ WQVLKD P
Sbjct: 825 LIWQVLKDCP 834
>SB_15656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1107
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = -3
Query: 584 TIMLLRD*DLFTGLLLKMGQN---LSPRSRTALCFPVIRKV-RLPSLLVDISMCAPVSLV 417
T+ + D +FT L L M + LSP SR F + R LL ++M
Sbjct: 380 TLQEISDAKIFTKLDLNMAFHQIELSPESRDITTFAAPTGLYRYCRLLFGVNMATEKFQN 439
Query: 416 MEWQVLKDSP 387
+ WQVLKD P
Sbjct: 440 LIWQVLKDCP 449
>SB_9072| Best HMM Match : RVT_1 (HMM E-Value=3.4e-18)
Length = 217
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = -3
Query: 584 TIMLLRD*DLFTGLLLKMGQN---LSPRSRTALCFPVIRKV-RLPSLLVDISMCAPVSLV 417
T+ + D +FT L L M + LSP SR F + R LL ++M
Sbjct: 66 TLQEISDAKIFTKLDLNMAFHQIELSPESRDITTFAAPTGLYRYCRLLFGVNMATEKFQN 125
Query: 416 MEWQVLKDSP 387
+ WQVLKD P
Sbjct: 126 LIWQVLKDCP 135
>SB_56354| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19)
Length = 340
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = -3
Query: 584 TIMLLRD*DLFTGLLLKMGQN---LSPRSRTALCFPVIRKV-RLPSLLVDISMCAPVSLV 417
T+ + D +FT L L M + LSP SR F + R LL ++M
Sbjct: 66 TLQEISDAKIFTKLDLNMAFHQIELSPESRDITTFAAPTGLYRYCRLLFGVNMATEKFQN 125
Query: 416 MEWQVLKDSP 387
+ WQVLKD P
Sbjct: 126 LIWQVLKDCP 135
>SB_49147| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19)
Length = 667
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = -3
Query: 584 TIMLLRD*DLFTGLLLKMGQN---LSPRSRTALCFPVIRKV-RLPSLLVDISMCAPVSLV 417
T+ + D +FT L L M + LSP SR F + R LL ++M
Sbjct: 266 TLQEISDAKIFTKLDLNMAFHQIELSPESRDITTFAAPTGLYRYCRLLFGVNMATEKFQN 325
Query: 416 MEWQVLKDSP 387
+ WQVLKD P
Sbjct: 326 LIWQVLKDCP 335
>SB_39602| Best HMM Match : rve (HMM E-Value=1.4e-38)
Length = 523
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = -3
Query: 584 TIMLLRD*DLFTGLLLKMGQN---LSPRSRTALCFPVIRKV-RLPSLLVDISMCAPVSLV 417
T+ + D +FT L L M + LSP SR F + R LL ++M
Sbjct: 172 TLQEISDAKIFTKLDLNMAFHQIELSPESRDITTFAAPTGLYRYCRLLFGVNMATEKFQN 231
Query: 416 MEWQVLKDSP 387
+ WQVLKD P
Sbjct: 232 LIWQVLKDCP 241
>SB_37359| Best HMM Match : RVT_1 (HMM E-Value=3.5e-18)
Length = 435
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = -3
Query: 584 TIMLLRD*DLFTGLLLKMGQN---LSPRSRTALCFPVIRKV-RLPSLLVDISMCAPVSLV 417
T+ + D +FT L L M + LSP SR F + R LL ++M
Sbjct: 172 TLQEISDAKIFTKLDLNMAFHQIELSPESRDITTFAAPTGLYRYCRLLFGVNMATEKFQN 231
Query: 416 MEWQVLKDSP 387
+ WQVLKD P
Sbjct: 232 LIWQVLKDCP 241
>SB_26926| Best HMM Match : DUF104 (HMM E-Value=9.7)
Length = 254
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = -3
Query: 584 TIMLLRD*DLFTGLLLKMGQN---LSPRSRTALCFPVIRKV-RLPSLLVDISMCAPVSLV 417
T+ + D +FT L L M + LSP SR F + R LL ++M
Sbjct: 172 TLQEISDAKIFTKLDLNMAFHQIELSPESRDITTFAAPTGLYRYCRLLFGVNMATEKFQN 231
Query: 416 MEWQVLKDSP 387
+ WQVLKD P
Sbjct: 232 LIWQVLKDCP 241
>SB_21706| Best HMM Match : RVT_1 (HMM E-Value=6.6e-19)
Length = 323
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = -3
Query: 584 TIMLLRD*DLFTGLLLKMGQN---LSPRSRTALCFPVIRKV-RLPSLLVDISMCAPVSLV 417
T+ + D +FT L L M + LSP SR F + R LL ++M
Sbjct: 172 TLQEISDAKIFTKLDLNMAFHQIELSPESRDITTFAAPTGLYRYCRLLFGVNMATEKFQN 231
Query: 416 MEWQVLKDSP 387
+ WQVLKD P
Sbjct: 232 LIWQVLKDCP 241
>SB_18495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 545
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -1
Query: 139 NHHGLLMHHFCLLRQSLSAPSRYSTKVLYQIKLKDYAVDARIV 11
NH L+ HFCL+ SL S+ + + + + D +++ +IV
Sbjct: 163 NHAEKLLQHFCLMFSSLYPASKETINIHSLVNICDDSIELQIV 205
>SB_9047| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19)
Length = 1116
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = -3
Query: 584 TIMLLRD*DLFTGLLLKMGQN---LSPRSRTALCFPVIRKV-RLPSLLVDISMCAPVSLV 417
T+ + D +FT L L M + LSP SR F + R LL ++M
Sbjct: 488 TLQEISDAKIFTKLDLNMAFHQIELSPESRDITTFAAPTGLYRYCRLLFGVNMATEKFQN 547
Query: 416 MEWQVLKDSP 387
+ WQVLKD P
Sbjct: 548 LIWQVLKDCP 557
>SB_25863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 813
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +3
Query: 558 ISIPKEHYRWILGKQGQKLKELEKVTAT 641
+ IP+ R ++GK GQ++K+L++ T T
Sbjct: 465 VFIPEHLARHVIGKHGQRIKDLKQKTKT 492
>SB_51785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 348
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = -1
Query: 214 IVLISNIIHFFNMHGYIRMNGYHISNHHGLLMHHFCLLRQSLSAPSRYS 68
IV S ++HF N + + I+ +M FC R LS P R++
Sbjct: 245 IVYCSKLLHFSNSIANVLIYTLRINEFKHTVMKIFCQHRPHLSIPPRHA 293
>SB_38532| Best HMM Match : CRAM_rpt (HMM E-Value=2.1e-29)
Length = 263
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -1
Query: 232 IVGK*HIVLISNIIHFFNMHGYIRMNGYHIS-NHHGLLMHHFCLLRQSLSAPSRYSTKVL 56
I+ + +IV NI+ N+ + YH + HH + HH + S S++ T +
Sbjct: 156 IMQRCNIVQQCNIMQQCNIMQQCNIMQYHATVQHHATVQHHAISCNSATSCNSQHRTTMQ 215
Query: 55 YQIKLKDYAV 26
+ ++ +A+
Sbjct: 216 HHATVQHHAI 225
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,593,517
Number of Sequences: 59808
Number of extensions: 472473
Number of successful extensions: 1111
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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