Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021255
         (760 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          25   3.3  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    24   4.4  
AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450 CY...    24   5.9  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    23   7.7  

>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +2

Query: 182 EEMNNVGYENNVSFAYDDLFPALPLPSPLCNVIYNRLQTNF 304
           + ++N   EN+V++  DDL   +P+     N  YN L  N+
Sbjct: 162 KNLSNSQGENSVTYTLDDLSNTVPV-----NTQYNALNDNY 197


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +3

Query: 426 YRSAHRNIYQQRW-QSNFPYHWKAER 500
           + +  R+IYQ  + +  FP HWK +R
Sbjct: 468 HTAVFRSIYQGCFDRGEFPAHWKIQR 493


>AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450
           CYPm3r5 protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 334 FHVPYEERKLDNANTFGEGESLRTCH 411
           +HVPY E +L   N    G+S+   H
Sbjct: 36  YHVPYVEPELPYGNFKEMGKSIHPAH 61


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +2

Query: 425 IQERTSKYLP-AKMAV*LSLSLESRALFSSAATNFDPFSATG 547
           I  +T K++    M   LSL + ++ L  S    FDPF+ +G
Sbjct: 188 ISLKTRKFIGNTSMDPQLSLLMANQGLVESGHLVFDPFAGSG 229


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 764,108
Number of Sequences: 2352
Number of extensions: 16061
Number of successful extensions: 47
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)