Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021255
(760 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein ... 79 2e-14
BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotei... 79 2e-14
AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein. 78 3e-14
BC014305-1|AAH14305.2| 898|Homo sapiens HDLBP protein protein. 37 0.091
AK131375-1|BAD18526.1| 577|Homo sapiens protein ( Homo sapiens ... 37 0.091
AK127833-1|BAC87153.1| 847|Homo sapiens protein ( Homo sapiens ... 37 0.091
AL589765-14|CAI17175.1| 516|Homo sapiens tudor and KH domain co... 33 1.1
AL589765-13|CAI17177.1| 561|Homo sapiens tudor and KH domain co... 33 1.1
AF227192-1|AAF36701.1| 561|Homo sapiens tudor and KH domain-con... 33 1.1
AF119121-1|AAD30971.1| 606|Homo sapiens putative RNA binding pr... 33 1.1
BC021290-1|AAH21290.1| 598|Homo sapiens insulin-like growth fac... 31 3.4
AF198254-1|AAF37203.1| 577|Homo sapiens mRNA-binding protein CR... 31 3.4
AF117107-1|AAD09827.1| 598|Homo sapiens IGF-II mRNA-binding pro... 31 3.4
AF117106-1|AAD09826.1| 577|Homo sapiens IGF-II mRNA-binding pro... 31 3.4
AF057352-1|AAD31596.1| 556|Homo sapiens hepatocellular carcinom... 31 3.4
X78136-1|CAA55015.1| 365|Homo sapiens hnRNP-E2 protein. 31 6.0
DQ227344-1|ABB46294.1| 438|Homo sapiens IGF2 mRNA-binding prote... 31 6.0
BC107688-1|AAI07689.1| 335|Homo sapiens PCBP2 protein protein. 31 6.0
BC071942-1|AAH71942.1| 366|Homo sapiens poly(rC) binding protei... 31 6.0
BC001155-1|AAH01155.1| 362|Homo sapiens poly(rC) binding protei... 31 6.0
AB208825-1|BAD92062.1| 373|Homo sapiens poly(rC)-binding protei... 31 6.0
AB188306-1|BAD36897.1| 331|Homo sapiens poly(rC) binding protei... 31 6.0
BC012061-1|AAH12061.1| 313|Homo sapiens PCBP3 protein protein. 30 7.9
AY780793-1|AAV98363.1| 361|Homo sapiens poly(rC) binding protei... 30 7.9
AK094301-1|BAC04327.1| 351|Homo sapiens protein ( Homo sapiens ... 30 7.9
AF176329-1|AAG09240.1| 339|Homo sapiens alphaCP-3 protein. 30 7.9
>M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein
binding protein protein.
Length = 1268
Score = 78.6 bits (185), Expect = 2e-14
Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Frame = +1
Query: 235 PISSIAASQPLVQRNIQQATNKLR-VGSSLHTQVFHVPYEERKLDNANTFGEGESLRTCH 411
P+ AA Q NK+R + +S+ TQVFHVP EERK + N FGEGE + C
Sbjct: 46 PLPEKAACLESAQEPAGAWGNKIRPIKASVITQVFHVPLEERKYKDMNQFGEGEQAKICL 105
Query: 412 SITKDTGAHIEISTSKDGSLTFLITGKQSAVLE 510
I + TGAH+E+S +KD L+ +++GK AV++
Sbjct: 106 EIMQRTGAHLELSLAKDQGLSIMVSGKLDAVMK 138
Score = 69.7 bits (163), Expect = 1e-11
Identities = 33/87 (37%), Positives = 50/87 (57%)
Frame = +3
Query: 489 KAERCSRARRQILTHFQQQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINVPGISD 668
K + +AR+ I+ Q QAS ++IPKEH+R+++GK G+KL++LE TATKI +P D
Sbjct: 132 KLDAVMKARKDIVARLQTQASATVAIPKEHHRFVIGKNGEKLQDLELKTATKIQIPRPDD 191
Query: 669 NSXXXXXXXXXXXXXXAEHEIRVCSED 749
S A HE+ + S +
Sbjct: 192 PSNQIKITGTKEGIEKARHEVLLISAE 218
Score = 36.7 bits (81), Expect = 0.091
Identities = 18/64 (28%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Frame = +3
Query: 489 KAERCSRARRQILTHFQQQASKQISIP--KEHYRWILGKQGQKLKELEKVTATKINVPGI 662
+ E+C++ ++++ + S IS+P K+ ++ I+GK G +K++ + + TKI++P
Sbjct: 562 EVEKCTKYMQKMVADLVEN-SYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAE 620
Query: 663 SDNS 674
+ NS
Sbjct: 621 NSNS 624
>BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotein
binding protein (vigilin) protein.
Length = 1268
Score = 78.6 bits (185), Expect = 2e-14
Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Frame = +1
Query: 235 PISSIAASQPLVQRNIQQATNKLR-VGSSLHTQVFHVPYEERKLDNANTFGEGESLRTCH 411
P+ AA Q NK+R + +S+ TQVFHVP EERK + N FGEGE + C
Sbjct: 46 PLPEKAACLESAQEPAGAWGNKIRPIKASVITQVFHVPLEERKYKDMNQFGEGEQAKICL 105
Query: 412 SITKDTGAHIEISTSKDGSLTFLITGKQSAVLE 510
I + TGAH+E+S +KD L+ +++GK AV++
Sbjct: 106 EIMQRTGAHLELSLAKDQGLSIMVSGKLDAVMK 138
Score = 69.7 bits (163), Expect = 1e-11
Identities = 33/87 (37%), Positives = 50/87 (57%)
Frame = +3
Query: 489 KAERCSRARRQILTHFQQQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINVPGISD 668
K + +AR+ I+ Q QAS ++IPKEH+R+++GK G+KL++LE TATKI +P D
Sbjct: 132 KLDAVMKARKDIVARLQTQASATVAIPKEHHRFVIGKNGEKLQDLELKTATKIQIPRPDD 191
Query: 669 NSXXXXXXXXXXXXXXAEHEIRVCSED 749
S A HE+ + S +
Sbjct: 192 PSNQIKITGTKEGIEKARHEVLLISAE 218
Score = 36.7 bits (81), Expect = 0.091
Identities = 18/64 (28%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Frame = +3
Query: 489 KAERCSRARRQILTHFQQQASKQISIP--KEHYRWILGKQGQKLKELEKVTATKINVPGI 662
+ E+C++ ++++ + S IS+P K+ ++ I+GK G +K++ + + TKI++P
Sbjct: 562 EVEKCTKYMQKMVADLVEN-SYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAE 620
Query: 663 SDNS 674
+ NS
Sbjct: 621 NSNS 624
>AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein.
Length = 1268
Score = 78.2 bits (184), Expect = 3e-14
Identities = 36/73 (49%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Frame = +1
Query: 295 NKLR-VGSSLHTQVFHVPYEERKLDNANTFGEGESLRTCHSITKDTGAHIEISTSKDGSL 471
NK+R + +S+ TQVFHVP EERK + N FGEGE + C I + TGAH+E+S +KD L
Sbjct: 66 NKIRPIKASVITQVFHVPLEERKYKDMNQFGEGEQAKICLEIMQRTGAHLELSLAKDQGL 125
Query: 472 TFLITGKQSAVLE 510
+ +++GK AV++
Sbjct: 126 SIMVSGKLDAVMK 138
Score = 69.7 bits (163), Expect = 1e-11
Identities = 33/87 (37%), Positives = 50/87 (57%)
Frame = +3
Query: 489 KAERCSRARRQILTHFQQQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINVPGISD 668
K + +AR+ I+ Q QAS ++IPKEH+R+++GK G+KL++LE TATKI +P D
Sbjct: 132 KLDAVMKARKDIVARLQTQASATVAIPKEHHRFVIGKNGEKLQDLELKTATKIQIPRPDD 191
Query: 669 NSXXXXXXXXXXXXXXAEHEIRVCSED 749
S A HE+ + S +
Sbjct: 192 PSNQIKITGTKEGIEKARHEVLLISAE 218
Score = 36.7 bits (81), Expect = 0.091
Identities = 18/64 (28%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Frame = +3
Query: 489 KAERCSRARRQILTHFQQQASKQISIP--KEHYRWILGKQGQKLKELEKVTATKINVPGI 662
+ E+C++ ++++ + S IS+P K+ ++ I+GK G +K++ + + TKI++P
Sbjct: 562 EVEKCTKYMQKMVADLVEN-SYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAE 620
Query: 663 SDNS 674
+ NS
Sbjct: 621 NSNS 624
>BC014305-1|AAH14305.2| 898|Homo sapiens HDLBP protein protein.
Length = 898
Score = 36.7 bits (81), Expect = 0.091
Identities = 18/64 (28%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Frame = +3
Query: 489 KAERCSRARRQILTHFQQQASKQISIP--KEHYRWILGKQGQKLKELEKVTATKINVPGI 662
+ E+C++ ++++ + S IS+P K+ ++ I+GK G +K++ + + TKI++P
Sbjct: 192 EVEKCTKYMQKMVADLVEN-SYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAE 250
Query: 663 SDNS 674
+ NS
Sbjct: 251 NSNS 254
>AK131375-1|BAD18526.1| 577|Homo sapiens protein ( Homo sapiens
cDNA FLJ16432 fis, clone BRACE3010076, highly similar
to Vigilin. ).
Length = 577
Score = 36.7 bits (81), Expect = 0.091
Identities = 18/64 (28%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Frame = +3
Query: 489 KAERCSRARRQILTHFQQQASKQISIP--KEHYRWILGKQGQKLKELEKVTATKINVPGI 662
+ E+C++ ++++ + S IS+P K+ ++ I+GK G +K++ + + TKI++P
Sbjct: 59 EVEKCTKYMQKMVADLVEN-SYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAE 117
Query: 663 SDNS 674
+ NS
Sbjct: 118 NSNS 121
>AK127833-1|BAC87153.1| 847|Homo sapiens protein ( Homo sapiens
cDNA FLJ45936 fis, clone PLACE7004103, highly similar
to Vigilin. ).
Length = 847
Score = 36.7 bits (81), Expect = 0.091
Identities = 18/64 (28%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Frame = +3
Query: 489 KAERCSRARRQILTHFQQQASKQISIP--KEHYRWILGKQGQKLKELEKVTATKINVPGI 662
+ E+C++ ++++ + S IS+P K+ ++ I+GK G +K++ + + TKI++P
Sbjct: 245 EVEKCTKYMQKMVADLVEN-SYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAE 303
Query: 663 SDNS 674
+ NS
Sbjct: 304 NSNS 307
>AL589765-14|CAI17175.1| 516|Homo sapiens tudor and KH domain
containing protein.
Length = 516
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 498 RCSRARRQILTHF-QQQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINV 653
R +R + LT + ++ +P+E + I+G+QG +K+L K T +I+V
Sbjct: 36 RYRESREERLTFVGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV 88
>AL589765-13|CAI17177.1| 561|Homo sapiens tudor and KH domain
containing protein.
Length = 561
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 498 RCSRARRQILTHF-QQQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINV 653
R +R + LT + ++ +P+E + I+G+QG +K+L K T +I+V
Sbjct: 36 RYRESREERLTFVGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV 88
>AF227192-1|AAF36701.1| 561|Homo sapiens tudor and KH
domain-containing protein protein.
Length = 561
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 498 RCSRARRQILTHF-QQQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINV 653
R +R + LT + ++ +P+E + I+G+QG +K+L K T +I+V
Sbjct: 36 RYRESREERLTFVGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV 88
>AF119121-1|AAD30971.1| 606|Homo sapiens putative RNA binding
protein protein.
Length = 606
Score = 33.1 bits (72), Expect = 1.1
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 498 RCSRARRQILTHF-QQQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINV 653
R +R + LT + ++ +P+E + I+G+QG +K+L K T +I+V
Sbjct: 36 RYRESREERLTFVGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV 88
>BC021290-1|AAH21290.1| 598|Homo sapiens insulin-like growth factor
2 mRNA binding protein 2 protein.
Length = 598
Score = 31.5 bits (68), Expect = 3.4
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 588 ILGKQGQKLKELEKVTATKINVPGISDNS 674
++GK+G+ LK++E T TKI + + D S
Sbjct: 288 LIGKEGRNLKKIEHETGTKITISSLQDLS 316
>AF198254-1|AAF37203.1| 577|Homo sapiens mRNA-binding protein CRDBP
protein.
Length = 577
Score = 31.5 bits (68), Expect = 3.4
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
Frame = +3
Query: 387 GRILKNLPFHN*GYRSAHRNIYQQRWQSNFPYHWKAERCSRARRQILTHFQQQASKQIS- 563
G ++N+ HR + H E CS A + IL ++A +
Sbjct: 215 GATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTA 274
Query: 564 --IPKE---HYRWI---LGKQGQKLKELEKVTATKINVPGISD 668
+P + H ++ +GK+G+ LK++E+ T TKI + + D
Sbjct: 275 DEVPLKTLAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQD 317
>AF117107-1|AAD09827.1| 598|Homo sapiens IGF-II mRNA-binding
protein 2 protein.
Length = 598
Score = 31.5 bits (68), Expect = 3.4
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 588 ILGKQGQKLKELEKVTATKINVPGISDNS 674
++GK+G+ LK++E T TKI + + D S
Sbjct: 288 LIGKEGRNLKKIEHETGTKITISSLQDLS 316
>AF117106-1|AAD09826.1| 577|Homo sapiens IGF-II mRNA-binding
protein 1 protein.
Length = 577
Score = 31.5 bits (68), Expect = 3.4
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
Frame = +3
Query: 387 GRILKNLPFHN*GYRSAHRNIYQQRWQSNFPYHWKAERCSRARRQILTHFQQQASKQIS- 563
G ++N+ HR + H E CS A + IL ++A +
Sbjct: 215 GATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCSSACKMILEIMHKEAKDTKTA 274
Query: 564 --IPKE---HYRWI---LGKQGQKLKELEKVTATKINVPGISD 668
+P + H ++ +GK+G+ LK++E+ T TKI + + D
Sbjct: 275 DEVPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQD 317
>AF057352-1|AAD31596.1| 556|Homo sapiens hepatocellular carcinoma
autoantigen protein.
Length = 556
Score = 31.5 bits (68), Expect = 3.4
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 588 ILGKQGQKLKELEKVTATKINVPGISDNS 674
++GK+G+ LK++E T TKI + + D S
Sbjct: 289 LIGKEGRNLKKIEHETGTKITISSLQDLS 317
>X78136-1|CAA55015.1| 365|Homo sapiens hnRNP-E2 protein.
Length = 365
Score = 30.7 bits (66), Expect = 6.0
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +3
Query: 540 QQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINV 653
Q S +++IP + I+G+QG K+ E+ +++ +I +
Sbjct: 286 QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 323
>DQ227344-1|ABB46294.1| 438|Homo sapiens IGF2 mRNA-binding protein
1 isoform protein.
Length = 438
Score = 30.7 bits (66), Expect = 6.0
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = +3
Query: 588 ILGKQGQKLKELEKVTATKINVPGISD 668
++GK+G+ LK++E+ T TKI + + D
Sbjct: 152 LIGKEGRNLKKVEQDTETKITISSLQD 178
>BC107688-1|AAI07689.1| 335|Homo sapiens PCBP2 protein protein.
Length = 335
Score = 30.7 bits (66), Expect = 6.0
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +3
Query: 540 QQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINV 653
Q S +++IP + I+G+QG K+ E+ +++ +I +
Sbjct: 256 QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 293
>BC071942-1|AAH71942.1| 366|Homo sapiens poly(rC) binding protein 2
protein.
Length = 366
Score = 30.7 bits (66), Expect = 6.0
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +3
Query: 540 QQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINV 653
Q S +++IP + I+G+QG K+ E+ +++ +I +
Sbjct: 287 QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 324
>BC001155-1|AAH01155.1| 362|Homo sapiens poly(rC) binding protein 2
protein.
Length = 362
Score = 30.7 bits (66), Expect = 6.0
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +3
Query: 540 QQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINV 653
Q S +++IP + I+G+QG K+ E+ +++ +I +
Sbjct: 283 QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 320
>AB208825-1|BAD92062.1| 373|Homo sapiens poly(rC)-binding protein 2
isoform b variant protein.
Length = 373
Score = 30.7 bits (66), Expect = 6.0
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +3
Query: 540 QQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINV 653
Q S +++IP + I+G+QG K+ E+ +++ +I +
Sbjct: 294 QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 331
>AB188306-1|BAD36897.1| 331|Homo sapiens poly(rC) binding protein 2
protein.
Length = 331
Score = 30.7 bits (66), Expect = 6.0
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +3
Query: 540 QQASKQISIPKEHYRWILGKQGQKLKELEKVTATKINV 653
Q S +++IP + I+G+QG K+ E+ +++ +I +
Sbjct: 252 QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 289
>BC012061-1|AAH12061.1| 313|Homo sapiens PCBP3 protein protein.
Length = 313
Score = 30.3 bits (65), Expect = 7.9
Identities = 10/43 (23%), Positives = 27/43 (62%)
Frame = +3
Query: 546 ASKQISIPKEHYRWILGKQGQKLKELEKVTATKINVPGISDNS 674
++ +++IP + I+G+QG K+ E+ +++ +I + ++ S
Sbjct: 236 STHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 278
>AY780793-1|AAV98363.1| 361|Homo sapiens poly(rC) binding protein 3
protein.
Length = 361
Score = 30.3 bits (65), Expect = 7.9
Identities = 10/43 (23%), Positives = 27/43 (62%)
Frame = +3
Query: 546 ASKQISIPKEHYRWILGKQGQKLKELEKVTATKINVPGISDNS 674
++ +++IP + I+G+QG K+ E+ +++ +I + ++ S
Sbjct: 284 STHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 326
>AK094301-1|BAC04327.1| 351|Homo sapiens protein ( Homo sapiens
cDNA FLJ36982 fis, clone BRACE2006488, highly similar to
POLY(RC) BINDING PROTEIN 2. ).
Length = 351
Score = 30.3 bits (65), Expect = 7.9
Identities = 10/43 (23%), Positives = 27/43 (62%)
Frame = +3
Query: 546 ASKQISIPKEHYRWILGKQGQKLKELEKVTATKINVPGISDNS 674
++ +++IP + I+G+QG K+ E+ +++ +I + ++ S
Sbjct: 274 STHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 316
>AF176329-1|AAG09240.1| 339|Homo sapiens alphaCP-3 protein.
Length = 339
Score = 30.3 bits (65), Expect = 7.9
Identities = 10/43 (23%), Positives = 27/43 (62%)
Frame = +3
Query: 546 ASKQISIPKEHYRWILGKQGQKLKELEKVTATKINVPGISDNS 674
++ +++IP + I+G+QG K+ E+ +++ +I + ++ S
Sbjct: 262 STHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 304
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,972,318
Number of Sequences: 237096
Number of extensions: 2346928
Number of successful extensions: 8823
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 8570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8823
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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