Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021254
         (762 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    27   0.63 
Z22930-6|CAA80518.1|  277|Anopheles gambiae trypsin protein.           25   2.5  
Z18890-1|CAA79328.1|  277|Anopheles gambiae trypsin protein.           25   2.5  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    25   2.5  
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    25   3.4  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    25   3.4  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   7.8  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 27.1 bits (57), Expect = 0.63
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = +1

Query: 532 PGQRD-PGDRGERGAGGPLLRDGPR--RSCRPLPAVEGAP 642
           PG    PG++G +G  GP+   GP+  R    LP   G P
Sbjct: 123 PGSEGLPGEKGTKGEPGPVGLQGPKGDRGRDGLPGYPGIP 162



 Score = 25.8 bits (54), Expect = 1.5
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
 Frame = +1

Query: 517 GGIVVPGQRDP----GDRGERGAGGPLLRDGPR 603
           GG  VPG+  P    GD+G++G  G +   GP+
Sbjct: 447 GGQGVPGRPGPEGMPGDKGDKGESGSVGMPGPQ 479



 Score = 23.4 bits (48), Expect = 7.8
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +1

Query: 529 VPGQRDPGDRGERGAGGPLLRDGPR-RSCRPLP-AVEGAPAQ 648
           +PG  D GD+GE G+ G     GPR    +P P  + G P Q
Sbjct: 460 MPG--DKGDKGESGSVGMPGPQGPRGYPGQPGPEGLRGEPGQ 499


>Z22930-6|CAA80518.1|  277|Anopheles gambiae trypsin protein.
          Length = 277

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -1

Query: 372 LAVSSVVGAWSWGPTSASPQVSGECGEVAS 283
           +A   +VG  SWG   A P   G  G VAS
Sbjct: 237 VADGKLVGVVSWGYGCAQPGYPGVYGRVAS 266


>Z18890-1|CAA79328.1|  277|Anopheles gambiae trypsin protein.
          Length = 277

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -1

Query: 372 LAVSSVVGAWSWGPTSASPQVSGECGEVAS 283
           +A   +VG  SWG   A P   G  G VAS
Sbjct: 237 VADGKLVGVVSWGYGCAQPGYPGVYGRVAS 266


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 379 QLKRYKETAQSTEAPAPAEPG 441
           Q KRY +T +ST AP+   PG
Sbjct: 358 QTKRYSQTVESTNAPS-RSPG 377


>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
            protease protein.
          Length = 1322

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 305  PDTCGLALVGPQDQAPT 355
            PDTCG  L+ P  + PT
Sbjct: 1058 PDTCGRVLIDPTLRKPT 1074


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
            protein.
          Length = 1322

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 305  PDTCGLALVGPQDQAPT 355
            PDTCG  L+ P  + PT
Sbjct: 1058 PDTCGRVLIDPTLRKPT 1074


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 532 PGQRDPGDRGERGAGGPLLRDGP 600
           PG++  GDRGE G  G + + GP
Sbjct: 244 PGEK--GDRGEIGVKGLMGQSGP 264


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 756,812
Number of Sequences: 2352
Number of extensions: 15457
Number of successful extensions: 46
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)