Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021254
(762 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X55362-1|CAA39047.1| 461|Homo sapiens ornithine decarboxylase p... 60 8e-09
X16277-1|CAA34353.1| 461|Homo sapiens ornithine decarboxylase (... 60 8e-09
M81740-1|AAA59967.1| 461|Homo sapiens ornithine decarboxylase p... 60 8e-09
M34158-1|AAA59969.1| 461|Homo sapiens ornithine decarboxylase p... 60 8e-09
M33764-1|AAA60564.1| 461|Homo sapiens protein ( Human ornithine... 60 8e-09
M31061-1|AAA60563.1| 461|Homo sapiens ODC1 protein. 60 8e-09
M16650-1|AAA59966.2| 461|Homo sapiens ornithine decarboxylase p... 60 8e-09
BC025296-1|AAH25296.1| 461|Homo sapiens ornithine decarboxylase... 60 8e-09
AY841870-1|AAV88093.1| 461|Homo sapiens ornithine decarboxylase... 60 8e-09
AC007249-2|AAY15034.1| 461|Homo sapiens unknown protein. 60 8e-09
AY050638-1|AAL08053.1| 204|Homo sapiens ornithine decarboxylase... 47 6e-05
AL020995-3|CAI19353.1| 204|Homo sapiens arginine decarboxylase ... 47 6e-05
D88674-1|BAA23593.1| 448|Homo sapiens antizyme inhibitor protein. 47 8e-05
CR456745-1|CAG33026.1| 448|Homo sapiens OAZIN protein. 47 8e-05
BT006858-1|AAP35504.1| 448|Homo sapiens ornithine decarboxylase... 47 8e-05
BC019279-1|AAH19279.1| 448|Homo sapiens antizyme inhibitor 1 pr... 47 8e-05
BC013420-1|AAH13420.1| 448|Homo sapiens antizyme inhibitor 1 pr... 47 8e-05
BC028128-1|AAH28128.1| 460|Homo sapiens arginine decarboxylase ... 45 3e-04
BC010449-1|AAH10449.1| 460|Homo sapiens ADC protein protein. 45 3e-04
AY325129-1|AAQ62560.1| 460|Homo sapiens arginine decarboxylase ... 45 3e-04
AY050637-1|AAL08052.1| 362|Homo sapiens ornithine decarboxylase... 45 3e-04
AY050636-1|AAL08051.1| 374|Homo sapiens ornithine decarboxylase... 45 3e-04
AY050635-1|AAL08050.1| 480|Homo sapiens ornithine decarboxylase... 45 3e-04
AY050634-1|AAL08049.1| 460|Homo sapiens ornithine decarboxylase... 45 3e-04
AL020995-5|CAI19355.1| 480|Homo sapiens arginine decarboxylase ... 45 3e-04
AL020995-4|CAI19354.1| 460|Homo sapiens arginine decarboxylase ... 45 3e-04
AB075825-1|BAB85531.1| 420|Homo sapiens KIAA1945 protein protein. 45 3e-04
DQ185043-1|ABD14423.1| 154|Homo sapiens ornithine decarboxylase... 41 0.006
M69008-1|AAA52754.1| 623|Homo sapiens alpha-1 type XIII collage... 36 0.12
M59217-1|AAA51685.1| 584|Homo sapiens alpha-1 type XIII collage... 36 0.12
AL138925-3|CAI15452.1| 683|Homo sapiens collagen type XIII alph... 36 0.12
AL138925-2|CAI15451.2| 695|Homo sapiens collagen type XIII alph... 36 0.12
AL138925-1|CAI15450.1| 717|Homo sapiens collagen type XIII alph... 36 0.12
AJ293624-1|CAC00688.1| 717|Homo sapiens type XIII collagen prot... 36 0.12
AK123186-1|BAC85550.1| 233|Homo sapiens tein. protein. 32 2.6
U82483-1|AAC13661.1| 382|Homo sapiens vascular addressin MAdCAM... 31 5.9
Z74616-1|CAA98969.1| 1366|Homo sapiens prepro-alpha2(I) collagen... 30 7.8
Y00724-1|CAA68709.1| 765|Homo sapiens protein ( Human mRNA for ... 30 7.8
V00503-1|CAA23761.1| 740|Homo sapiens protein ( Human mRNA enco... 30 7.8
U93037-1|AAB65621.1| 635|Homo sapiens elastin protein. 30 7.8
L47668-1|AAB59577.1| 84|Homo sapiens alpha-2 collagen type I p... 30 7.8
J03464-1|AAB59374.1| 1366|Homo sapiens COL1A2 protein. 30 7.8
BC054498-1|AAH54498.1| 1366|Homo sapiens collagen, type I, alpha... 30 7.8
BC042586-1|AAH42586.1| 1366|Homo sapiens collagen, type I, alpha... 30 7.8
AF004877-1|AAB93981.1| 1366|Homo sapiens pro-alpha 2(I) collagen... 30 7.8
AC002528-1|AAB69977.1| 1186|Homo sapiens alpha2(I) collagen prot... 30 7.8
>X55362-1|CAA39047.1| 461|Homo sapiens ornithine decarboxylase
protein.
Length = 461
Score = 60.1 bits (139), Expect = 8e-09
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +2
Query: 557 VESGVQEDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXXXXXFDCA 736
V S +D FYV DLG+++ ++ +W + LPRV PFYAVKC FDCA
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDCA 90
Query: 737 SK 742
SK
Sbjct: 91 SK 92
>X16277-1|CAA34353.1| 461|Homo sapiens ornithine decarboxylase
(ODC) protein.
Length = 461
Score = 60.1 bits (139), Expect = 8e-09
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +2
Query: 557 VESGVQEDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXXXXXFDCA 736
V S +D FYV DLG+++ ++ +W + LPRV PFYAVKC FDCA
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDCA 90
Query: 737 SK 742
SK
Sbjct: 91 SK 92
>M81740-1|AAA59967.1| 461|Homo sapiens ornithine decarboxylase
protein.
Length = 461
Score = 60.1 bits (139), Expect = 8e-09
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +2
Query: 557 VESGVQEDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXXXXXFDCA 736
V S +D FYV DLG+++ ++ +W + LPRV PFYAVKC FDCA
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDCA 90
Query: 737 SK 742
SK
Sbjct: 91 SK 92
>M34158-1|AAA59969.1| 461|Homo sapiens ornithine decarboxylase
protein.
Length = 461
Score = 60.1 bits (139), Expect = 8e-09
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +2
Query: 557 VESGVQEDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXXXXXFDCA 736
V S +D FYV DLG+++ ++ +W + LPRV PFYAVKC FDCA
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDCA 90
Query: 737 SK 742
SK
Sbjct: 91 SK 92
>M33764-1|AAA60564.1| 461|Homo sapiens protein ( Human ornithine
decarboxylase gene, complete cds. ).
Length = 461
Score = 60.1 bits (139), Expect = 8e-09
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +2
Query: 557 VESGVQEDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXXXXXFDCA 736
V S +D FYV DLG+++ ++ +W + LPRV PFYAVKC FDCA
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDCA 90
Query: 737 SK 742
SK
Sbjct: 91 SK 92
>M31061-1|AAA60563.1| 461|Homo sapiens ODC1 protein.
Length = 461
Score = 60.1 bits (139), Expect = 8e-09
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +2
Query: 557 VESGVQEDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXXXXXFDCA 736
V S +D FYV DLG+++ ++ +W + LPRV PFYAVKC FDCA
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDCA 90
Query: 737 SK 742
SK
Sbjct: 91 SK 92
>M16650-1|AAA59966.2| 461|Homo sapiens ornithine decarboxylase
protein.
Length = 461
Score = 60.1 bits (139), Expect = 8e-09
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +2
Query: 557 VESGVQEDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXXXXXFDCA 736
V S +D FYV DLG+++ ++ +W + LPRV PFYAVKC FDCA
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDCA 90
Query: 737 SK 742
SK
Sbjct: 91 SK 92
>BC025296-1|AAH25296.1| 461|Homo sapiens ornithine decarboxylase 1
protein.
Length = 461
Score = 60.1 bits (139), Expect = 8e-09
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +2
Query: 557 VESGVQEDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXXXXXFDCA 736
V S +D FYV DLG+++ ++ +W + LPRV PFYAVKC FDCA
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDCA 90
Query: 737 SK 742
SK
Sbjct: 91 SK 92
>AY841870-1|AAV88093.1| 461|Homo sapiens ornithine decarboxylase 1
protein.
Length = 461
Score = 60.1 bits (139), Expect = 8e-09
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +2
Query: 557 VESGVQEDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXXXXXFDCA 736
V S +D FYV DLG+++ ++ +W + LPRV PFYAVKC FDCA
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDCA 90
Query: 737 SK 742
SK
Sbjct: 91 SK 92
>AC007249-2|AAY15034.1| 461|Homo sapiens unknown protein.
Length = 461
Score = 60.1 bits (139), Expect = 8e-09
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +2
Query: 557 VESGVQEDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXXXXXFDCA 736
V S +D FYV DLG+++ ++ +W + LPRV PFYAVKC FDCA
Sbjct: 31 VSSSDDKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDCA 90
Query: 737 SK 742
SK
Sbjct: 91 SK 92
>AY050638-1|AAL08053.1| 204|Homo sapiens ornithine
decarboxylase-like protein variant 6 protein.
Length = 204
Score = 47.2 bits (107), Expect = 6e-05
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +2
Query: 584 FYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXXXXXFDCASKVRS 751
F+V DLG +V ++ + + LPRV PFYAVKC F CA+K+ S
Sbjct: 41 FFVADLGAIVRKHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKIAS 96
>AL020995-3|CAI19353.1| 204|Homo sapiens arginine decarboxylase
protein.
Length = 204
Score = 47.2 bits (107), Expect = 6e-05
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +2
Query: 584 FYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXXXXXFDCASKVRS 751
F+V DLG +V ++ + + LPRV PFYAVKC F CA+K+ S
Sbjct: 41 FFVADLGAIVRKHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKIAS 96
>D88674-1|BAA23593.1| 448|Homo sapiens antizyme inhibitor protein.
Length = 448
Score = 46.8 bits (106), Expect = 8e-05
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +2
Query: 575 EDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXXXXXFDCASK 742
++ F+V DLG++V ++ QW+ ++ +++PFY VKC F C+SK
Sbjct: 37 KNAFFVGDLGKIVKKHSQWQNVVAQIKPFYTVKCNSAPAVLEILAALGTGFACSSK 92
>CR456745-1|CAG33026.1| 448|Homo sapiens OAZIN protein.
Length = 448
Score = 46.8 bits (106), Expect = 8e-05
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +2
Query: 575 EDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXXXXXFDCASK 742
++ F+V DLG++V ++ QW+ ++ +++PFY VKC F C+SK
Sbjct: 37 KNAFFVGDLGKIVKKHSQWQNVVAQIKPFYTVKCNSAPAVLEILAALGTGFACSSK 92
>BT006858-1|AAP35504.1| 448|Homo sapiens ornithine decarboxylase
antizyme inhibitor protein.
Length = 448
Score = 46.8 bits (106), Expect = 8e-05
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +2
Query: 575 EDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXXXXXFDCASK 742
++ F+V DLG++V ++ QW+ ++ +++PFY VKC F C+SK
Sbjct: 37 KNAFFVGDLGKIVKKHSQWQNVVAQIKPFYTVKCNSAPAVLEILAALGTGFACSSK 92
>BC019279-1|AAH19279.1| 448|Homo sapiens antizyme inhibitor 1
protein.
Length = 448
Score = 46.8 bits (106), Expect = 8e-05
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +2
Query: 575 EDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXXXXXFDCASK 742
++ F+V DLG++V ++ QW+ ++ +++PFY VKC F C+SK
Sbjct: 37 KNAFFVGDLGKIVKKHSQWQNVVAQIKPFYTVKCNSAPAVLEILAALGTGFACSSK 92
>BC013420-1|AAH13420.1| 448|Homo sapiens antizyme inhibitor 1
protein.
Length = 448
Score = 46.8 bits (106), Expect = 8e-05
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +2
Query: 575 EDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXXXXXFDCASK 742
++ F+V DLG++V ++ QW+ ++ +++PFY VKC F C+SK
Sbjct: 37 KNAFFVGDLGKIVKKHSQWQNVVAQIKPFYTVKCNSAPAVLEILAALGTGFACSSK 92
>BC028128-1|AAH28128.1| 460|Homo sapiens arginine decarboxylase
protein.
Length = 460
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +2
Query: 584 FYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXXXXXFDCASK 742
F+V DLG +V ++ + + LPRV PFYAVKC F CA+K
Sbjct: 41 FFVADLGAIVRKHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANK 93
>BC010449-1|AAH10449.1| 460|Homo sapiens ADC protein protein.
Length = 460
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +2
Query: 584 FYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXXXXXFDCASK 742
F+V DLG +V ++ + + LPRV PFYAVKC F CA+K
Sbjct: 41 FFVADLGAIVRKHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANK 93
>AY325129-1|AAQ62560.1| 460|Homo sapiens arginine decarboxylase
protein.
Length = 460
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +2
Query: 584 FYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXXXXXFDCASK 742
F+V DLG +V ++ + + LPRV PFYAVKC F CA+K
Sbjct: 41 FFVADLGAIVRKHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANK 93
>AY050637-1|AAL08052.1| 362|Homo sapiens ornithine
decarboxylase-like protein variant 3 protein.
Length = 362
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +2
Query: 584 FYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXXXXXFDCASK 742
F+V DLG +V ++ + + LPRV PFYAVKC F CA+K
Sbjct: 41 FFVADLGAIVRKHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANK 93
>AY050636-1|AAL08051.1| 374|Homo sapiens ornithine
decarboxylase-like protein variant 4 protein.
Length = 374
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +2
Query: 584 FYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXXXXXFDCASK 742
F+V DLG +V ++ + + LPRV PFYAVKC F CA+K
Sbjct: 41 FFVADLGAIVRKHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANK 93
>AY050635-1|AAL08050.1| 480|Homo sapiens ornithine
decarboxylase-like protein variant 2 protein.
Length = 480
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +2
Query: 584 FYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXXXXXFDCASK 742
F+V DLG +V ++ + + LPRV PFYAVKC F CA+K
Sbjct: 41 FFVADLGAIVRKHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANK 93
>AY050634-1|AAL08049.1| 460|Homo sapiens ornithine
decarboxylase-like protein variant 1 protein.
Length = 460
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +2
Query: 584 FYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXXXXXFDCASK 742
F+V DLG +V ++ + + LPRV PFYAVKC F CA+K
Sbjct: 41 FFVADLGAIVRKHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANK 93
>AL020995-5|CAI19355.1| 480|Homo sapiens arginine decarboxylase
protein.
Length = 480
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +2
Query: 584 FYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXXXXXFDCASK 742
F+V DLG +V ++ + + LPRV PFYAVKC F CA+K
Sbjct: 41 FFVADLGAIVRKHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANK 93
>AL020995-4|CAI19354.1| 460|Homo sapiens arginine decarboxylase
protein.
Length = 460
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +2
Query: 584 FYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXXXXXFDCASK 742
F+V DLG +V ++ + + LPRV PFYAVKC F CA+K
Sbjct: 41 FFVADLGAIVRKHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANK 93
>AB075825-1|BAB85531.1| 420|Homo sapiens KIAA1945 protein protein.
Length = 420
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +2
Query: 584 FYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXXXXXFDCASK 742
F+V DLG +V ++ + + LPRV PFYAVKC F CA+K
Sbjct: 46 FFVADLGAIVRKHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANK 98
>DQ185043-1|ABD14423.1| 154|Homo sapiens ornithine decarboxylase 1
protein.
Length = 154
Score = 40.7 bits (91), Expect = 0.006
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +2
Query: 617 RYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXXXXXFDCASK 742
++ +W + LPRV PFYAVKC FDCASK
Sbjct: 2 KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDCASK 43
>M69008-1|AAA52754.1| 623|Homo sapiens alpha-1 type XIII collagen
protein.
Length = 623
Score = 36.3 bits (80), Expect = 0.12
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +1
Query: 514 DGGIVVPGQRDPGDRGERGAGGPLLRDGPRRS 609
DG + PGQ PGD+GERGA G DGP+ S
Sbjct: 312 DGQVGPPGQ--PGDKGERGAAGEQGPDGPKGS 341
>M59217-1|AAA51685.1| 584|Homo sapiens alpha-1 type XIII collagen
protein.
Length = 584
Score = 36.3 bits (80), Expect = 0.12
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +1
Query: 514 DGGIVVPGQRDPGDRGERGAGGPLLRDGPRRS 609
DG + PGQ PGD+GERGA G DGP+ S
Sbjct: 300 DGQVGPPGQ--PGDKGERGAAGEQGPDGPKGS 329
>AL138925-3|CAI15452.1| 683|Homo sapiens collagen type XIII alpha 1
protein.
Length = 683
Score = 36.3 bits (80), Expect = 0.12
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +1
Query: 514 DGGIVVPGQRDPGDRGERGAGGPLLRDGPRRS 609
DG + PGQ PGD+GERGA G DGP+ S
Sbjct: 383 DGQVGPPGQ--PGDKGERGAAGEQGPDGPKGS 412
>AL138925-2|CAI15451.2| 695|Homo sapiens collagen type XIII alpha 1
protein.
Length = 695
Score = 36.3 bits (80), Expect = 0.12
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +1
Query: 514 DGGIVVPGQRDPGDRGERGAGGPLLRDGPRRS 609
DG + PGQ PGD+GERGA G DGP+ S
Sbjct: 383 DGQVGPPGQ--PGDKGERGAAGEQGPDGPKGS 412
>AL138925-1|CAI15450.1| 717|Homo sapiens collagen type XIII alpha 1
protein.
Length = 717
Score = 36.3 bits (80), Expect = 0.12
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +1
Query: 514 DGGIVVPGQRDPGDRGERGAGGPLLRDGPRRS 609
DG + PGQ PGD+GERGA G DGP+ S
Sbjct: 405 DGQVGPPGQ--PGDKGERGAAGEQGPDGPKGS 434
>AJ293624-1|CAC00688.1| 717|Homo sapiens type XIII collagen
protein.
Length = 717
Score = 36.3 bits (80), Expect = 0.12
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = +1
Query: 514 DGGIVVPGQRDPGDRGERGAGGPLLRDGPRRS 609
DG + PGQ PGD+GERGA G DGP+ S
Sbjct: 405 DGQVGPPGQ--PGDKGERGAAGEQGPDGPKGS 434
>AK123186-1|BAC85550.1| 233|Homo sapiens tein. protein.
Length = 233
Score = 31.9 bits (69), Expect = 2.6
Identities = 20/46 (43%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +1
Query: 517 GGIVVPGQRDPGDRGER-GAGGP-LLRDGPRRSCRPLPAVEGAPAQ 648
GG P + G RG G GG D PRR CRPLP G Q
Sbjct: 146 GGAEPPRLQLAGTRGRAAGLGGAHSATDRPRRLCRPLPVSRGGSRQ 191
>U82483-1|AAC13661.1| 382|Homo sapiens vascular addressin MAdCAM-1
protein.
Length = 382
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 272 PGPADATSPHSPDTCGLALVGPQDQAPTTLDTANPD 379
P P D TSP SPDT + P +P DT +P+
Sbjct: 230 PEPPDTTSPESPDT--TSPESPDTTSPEPPDTTSPE 263
>Z74616-1|CAA98969.1| 1366|Homo sapiens prepro-alpha2(I) collagen
protein.
Length = 1366
Score = 30.3 bits (65), Expect = 7.8
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 517 GGIVVPGQRDP-GDRGERGAGGPLLRDGPRRS 609
G + PG GDRGE GA GP GPR S
Sbjct: 679 GAVGAPGPAGATGDRGEAGAAGPAGPAGPRGS 710
>Y00724-1|CAA68709.1| 765|Homo sapiens protein ( Human mRNA for
prepro-alpha2(I) collagen (COL1A2). ).
Length = 765
Score = 30.3 bits (65), Expect = 7.8
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 517 GGIVVPGQRDP-GDRGERGAGGPLLRDGPRRS 609
G + PG GDRGE GA GP GPR S
Sbjct: 679 GAVGAPGPAGATGDRGEAGAAGPAGPAGPRGS 710
>V00503-1|CAA23761.1| 740|Homo sapiens protein ( Human mRNA
encoding Pro-alpha-2 chain of type I procollagen. (major
part). ).
Length = 740
Score = 30.3 bits (65), Expect = 7.8
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 517 GGIVVPGQRDP-GDRGERGAGGPLLRDGPRRS 609
G + PG GDRGE GA GP GPR S
Sbjct: 57 GAVGAPGPAGATGDRGEAGAAGPAGPAGPRGS 88
>U93037-1|AAB65621.1| 635|Homo sapiens elastin protein.
Length = 635
Score = 30.3 bits (65), Expect = 7.8
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 520 GIVVPGQRDPGDRGERGAGGPLLRDGPRRSCRPLPAVEGAP 642
G VPG R D G R + P LR+G S + LP+ +P
Sbjct: 581 GAGVPGFRAGADEGVRRSLSPELREGDPSSSQHLPSTPSSP 621
>L47668-1|AAB59577.1| 84|Homo sapiens alpha-2 collagen type I
protein.
Length = 84
Score = 30.3 bits (65), Expect = 7.8
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 517 GGIVVPGQRDP-GDRGERGAGGPLLRDGPRRS 609
G + PG GDRGE GA GP GPR S
Sbjct: 17 GAVGAPGPAGATGDRGEAGAAGPAGPAGPRGS 48
>J03464-1|AAB59374.1| 1366|Homo sapiens COL1A2 protein.
Length = 1366
Score = 30.3 bits (65), Expect = 7.8
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 517 GGIVVPGQRDP-GDRGERGAGGPLLRDGPRRS 609
G + PG GDRGE GA GP GPR S
Sbjct: 679 GAVGAPGPAGATGDRGEAGAAGPAGPAGPRGS 710
>BC054498-1|AAH54498.1| 1366|Homo sapiens collagen, type I, alpha 2
protein.
Length = 1366
Score = 30.3 bits (65), Expect = 7.8
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 517 GGIVVPGQRDP-GDRGERGAGGPLLRDGPRRS 609
G + PG GDRGE GA GP GPR S
Sbjct: 679 GAVGAPGPAGATGDRGEAGAAGPAGPAGPRGS 710
>BC042586-1|AAH42586.1| 1366|Homo sapiens collagen, type I, alpha 2
protein.
Length = 1366
Score = 30.3 bits (65), Expect = 7.8
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 517 GGIVVPGQRDP-GDRGERGAGGPLLRDGPRRS 609
G + PG GDRGE GA GP GPR S
Sbjct: 679 GAVGAPGPAGATGDRGEAGAAGPAGPAGPRGS 710
>AF004877-1|AAB93981.1| 1366|Homo sapiens pro-alpha 2(I) collagen
protein.
Length = 1366
Score = 30.3 bits (65), Expect = 7.8
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 517 GGIVVPGQRDP-GDRGERGAGGPLLRDGPRRS 609
G + PG GDRGE GA GP GPR S
Sbjct: 679 GAVGAPGPAGATGDRGEAGAAGPAGPAGPRGS 710
>AC002528-1|AAB69977.1| 1186|Homo sapiens alpha2(I) collagen
protein.
Length = 1186
Score = 30.3 bits (65), Expect = 7.8
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 517 GGIVVPGQRDP-GDRGERGAGGPLLRDGPRRS 609
G + PG GDRGE GA GP GPR S
Sbjct: 499 GAVGAPGPAGATGDRGEAGAAGPAGPAGPRGS 530
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,991,125
Number of Sequences: 237096
Number of extensions: 2546991
Number of successful extensions: 12422
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 8902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12226
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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