Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021254
(762 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094710-1|AAM11063.1| 394|Drosophila melanogaster GH13851p pro... 49 6e-06
AE013599-568|AAF59150.1| 394|Drosophila melanogaster CG8721-PA ... 49 6e-06
X66601-1|CAA47167.1| 394|Drosophila melanogaster ornithine deca... 48 1e-05
X66599-1|CAA47165.1| 394|Drosophila melanogaster ornithine dec... 48 1e-05
X66600-1|CAA47166.1| 393|Drosophila melanogaster ornithine dec... 46 7e-05
AE013599-569|AAF59149.2| 393|Drosophila melanogaster CG8719-PA ... 46 7e-05
M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collag... 31 2.3
M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type I... 31 2.3
J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV pro-co... 31 2.3
AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,... 31 2.3
AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,... 31 2.3
AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,... 31 2.3
>AY094710-1|AAM11063.1| 394|Drosophila melanogaster GH13851p
protein.
Length = 394
Score = 49.2 bits (112), Expect = 6e-06
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +2
Query: 536 VSVIREIVESGVQ--EDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXX 709
+++ R I E +Q + + DL V + + W++LLPR++PFYAVKC
Sbjct: 15 LNIRRVIEECDLQRLDQALNICDLSSVERKLRLWQKLLPRIKPFYAVKCNDDPMVVRLLA 74
Query: 710 XXXXXFDCASK 742
FDCASK
Sbjct: 75 QLGAGFDCASK 85
>AE013599-568|AAF59150.1| 394|Drosophila melanogaster CG8721-PA
protein.
Length = 394
Score = 49.2 bits (112), Expect = 6e-06
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +2
Query: 536 VSVIREIVESGVQ--EDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXX 709
+++ R I E +Q + + DL V + + W++LLPR++PFYAVKC
Sbjct: 15 LNIRRVIEECDLQRLDQALNICDLSSVERKLRLWQKLLPRIKPFYAVKCNDDPMVVRLLA 74
Query: 710 XXXXXFDCASK 742
FDCASK
Sbjct: 75 QLGAGFDCASK 85
>X66601-1|CAA47167.1| 394|Drosophila melanogaster ornithine
decarboxylase protein.
Length = 394
Score = 48.4 bits (110), Expect = 1e-05
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +2
Query: 536 VSVIREIVESGVQ--EDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXX 709
+++ R I E +Q + + DL V + W++LLPR++PFYAVKC
Sbjct: 15 LNIRRVIEECDLQRLDQALNICDLSSVERNVRLWQKLLPRIKPFYAVKCNDDPMVVRLLA 74
Query: 710 XXXXXFDCASK 742
FDCASK
Sbjct: 75 QLGAGFDCASK 85
>X66599-1|CAA47165.1| 394|Drosophila melanogaster ornithine
decarboxylase protein.
Length = 394
Score = 48.4 bits (110), Expect = 1e-05
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +2
Query: 536 VSVIREIVESGVQ--EDPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXX 709
+++ R I E +Q + + DL V + W++LLPR++PFYAVKC
Sbjct: 15 LNIRRVIEECDLQRLDQALNICDLSSVERNVRLWQKLLPRIKPFYAVKCNDDPMVVRLLA 74
Query: 710 XXXXXFDCASK 742
FDCASK
Sbjct: 75 QLGAGFDCASK 85
>X66600-1|CAA47166.1| 393|Drosophila melanogaster ornithine
decarboxylase protein.
Length = 393
Score = 45.6 bits (103), Expect = 7e-05
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +2
Query: 545 IREIVESGVQE---DPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXX 715
IR+++E E + DL + + + W +L+PR+EP YAVKC
Sbjct: 17 IRKVIEQADLEHLDQALNICDLSSLERKLRLWHKLMPRIEPHYAVKCNDDPVVVKFLADL 76
Query: 716 XXXFDCASK 742
FDCASK
Sbjct: 77 GTGFDCASK 85
>AE013599-569|AAF59149.2| 393|Drosophila melanogaster CG8719-PA
protein.
Length = 393
Score = 45.6 bits (103), Expect = 7e-05
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +2
Query: 545 IREIVESGVQE---DPFYVMDLGEVVARYQQWKELLPRVEPFYAVKCXXXXXXXXXXXXX 715
IR+++E E + DL + + + W +L+PR+EP YAVKC
Sbjct: 17 IRKVIEQADLEHLDQALNICDLSSLERKLRLWHKLMPRIEPHYAVKCNDDPVVVKFLADL 76
Query: 716 XXXFDCASK 742
FDCASK
Sbjct: 77 GTGFDCASK 85
>M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collagen
protein.
Length = 1775
Score = 30.7 bits (66), Expect = 2.3
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +1
Query: 493 WRNNA*SDGGIVVPGQRDPGDRGERGAGGPLLRDGPRRSCRPLPAVEGAPAQG 651
WR A G+ P Q PG++GERG GP GPR L +GA G
Sbjct: 219 WRGTA----GLAGP-QGFPGEKGERGDSGPYGAKGPRGE-HGLKGEKGASCYG 265
>M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type IV
collagen protein.
Length = 1775
Score = 30.7 bits (66), Expect = 2.3
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +1
Query: 493 WRNNA*SDGGIVVPGQRDPGDRGERGAGGPLLRDGPRRSCRPLPAVEGAPAQG 651
WR A G+ P Q PG++GERG GP GPR L +GA G
Sbjct: 219 WRGTA----GLAGP-QGFPGEKGERGDSGPYGAKGPRGE-HGLKGEKGASCYG 265
>J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV
pro-collagen protein.
Length = 1775
Score = 30.7 bits (66), Expect = 2.3
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +1
Query: 493 WRNNA*SDGGIVVPGQRDPGDRGERGAGGPLLRDGPRRSCRPLPAVEGAPAQG 651
WR A G+ P Q PG++GERG GP GPR L +GA G
Sbjct: 219 WRGTA----GLAGP-QGFPGEKGERGDSGPYGAKGPRGE-HGLKGEKGASCYG 265
>AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,
isoform C protein.
Length = 1779
Score = 30.7 bits (66), Expect = 2.3
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +1
Query: 493 WRNNA*SDGGIVVPGQRDPGDRGERGAGGPLLRDGPRRSCRPLPAVEGAPAQG 651
WR A G+ P Q PG++GERG GP GPR L +GA G
Sbjct: 219 WRGTA----GLAGP-QGFPGEKGERGDSGPYGAKGPRGE-HGLKGEKGASCYG 265
>AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,
isoform B protein.
Length = 1779
Score = 30.7 bits (66), Expect = 2.3
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +1
Query: 493 WRNNA*SDGGIVVPGQRDPGDRGERGAGGPLLRDGPRRSCRPLPAVEGAPAQG 651
WR A G+ P Q PG++GERG GP GPR L +GA G
Sbjct: 219 WRGTA----GLAGP-QGFPGEKGERGDSGPYGAKGPRGE-HGLKGEKGASCYG 265
>AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,
isoform A protein.
Length = 1779
Score = 30.7 bits (66), Expect = 2.3
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +1
Query: 493 WRNNA*SDGGIVVPGQRDPGDRGERGAGGPLLRDGPRRSCRPLPAVEGAPAQG 651
WR A G+ P Q PG++GERG GP GPR L +GA G
Sbjct: 219 WRGTA----GLAGP-QGFPGEKGERGDSGPYGAKGPRGE-HGLKGEKGASCYG 265
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,812,948
Number of Sequences: 53049
Number of extensions: 706961
Number of successful extensions: 2210
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2207
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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