Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021253X
         (322 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6FT41 Cluster: Similar to sp|Q07651 Saccharomyces cere...    33   1.6  
UniRef50_Q5M3R0 Cluster: Histidine ammonia-lyase; n=2; Streptoco...    32   2.1  
UniRef50_Q2F837 Cluster: Eukaryotic translation elongation facto...    31   4.9  
UniRef50_Q8XPW6 Cluster: Putative uncharacterized protein; n=2; ...    31   6.5  
UniRef50_Q4AIX0 Cluster: Putative uncharacterized protein; n=1; ...    31   6.5  
UniRef50_Q2APQ2 Cluster: Aminoglycoside phosphotransferase; n=6;...    31   6.5  
UniRef50_Q4SJ00 Cluster: Chromosome 21 SCAF14577, whole genome s...    30   8.6  
UniRef50_Q31PQ5 Cluster: Putative uncharacterized protein; n=3; ...    30   8.6  
UniRef50_A7GZS1 Cluster: Metalloid reductase RarA; n=1; Campylob...    30   8.6  
UniRef50_A2U0W8 Cluster: Putative uncharacterized protein; n=3; ...    30   8.6  

>UniRef50_Q6FT41 Cluster: Similar to sp|Q07651 Saccharomyces
           cerevisiae YDL222c; n=1; Candida glabrata|Rep: Similar
           to sp|Q07651 Saccharomyces cerevisiae YDL222c - Candida
           glabrata (Yeast) (Torulopsis glabrata)
          Length = 280

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = -3

Query: 152 SIFFTRLGNVPLFFILYKVIHNISETFCYDCKLKCKFI 39
           S+FFT L  VP+F  ++K+   +S T C  C L   FI
Sbjct: 120 SLFFTVLAIVPIFLSIFKLARPLSITTCVLCWLSWFFI 157


>UniRef50_Q5M3R0 Cluster: Histidine ammonia-lyase; n=2;
           Streptococcus thermophilus|Rep: Histidine ammonia-lyase
           - Streptococcus thermophilus (strain ATCC BAA-250 / LMG
           18311)
          Length = 498

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
 Frame = -3

Query: 188 FPREK--GLQTHS-FSIFFTRLGNVPLFFILYKVIHNISE 78
           FP E+  GL TH  F I F R G +    +LY+VI  ISE
Sbjct: 446 FPEERPLGLLTHEVFQIIFERYGTLQDHHMLYQVIRGISE 485


>UniRef50_Q2F837 Cluster: Eukaryotic translation elongation factor 1
           alpha 1; n=25; Coelomata|Rep: Eukaryotic translation
           elongation factor 1 alpha 1 - Homo sapiens (Human)
          Length = 93

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = -2

Query: 321 AVNFKEAGGGKVTKAAEKATKGR 253
           AV+ K AG GKVTK+A+KA K +
Sbjct: 71  AVDKKAAGAGKVTKSAQKAQKAK 93


>UniRef50_Q8XPW6 Cluster: Putative uncharacterized protein; n=2;
           Ralstonia solanacearum|Rep: Putative uncharacterized
           protein - Ralstonia solanacearum (Pseudomonas
           solanacearum)
          Length = 232

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = -3

Query: 275 PKRPPRAEVARAVNSTIFLPLGFLHPPKVFPREKGLQT-HSFSIFFTR 135
           P+RP R  +  A+++ + +P GF + P    R+ G +T H  + F +R
Sbjct: 150 PRRPDRLPLLFAIDAKLAIPKGFFYLPDCATRQHGSETVHCGADFSSR 197


>UniRef50_Q4AIX0 Cluster: Putative uncharacterized protein; n=1;
           Chlorobium phaeobacteroides BS1|Rep: Putative
           uncharacterized protein - Chlorobium phaeobacteroides
           BS1
          Length = 122

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -1

Query: 241 LLTAQFFFHLGSSIPRRFFRGKKGFKLIPFLYF 143
           LLT++ FF+L   IP RF+      KL P  +F
Sbjct: 71  LLTSKIFFNLFEIIPERFYVTSTALKLFPQTHF 103


>UniRef50_Q2APQ2 Cluster: Aminoglycoside phosphotransferase; n=6;
           Bacillus cereus group|Rep: Aminoglycoside
           phosphotransferase - Bacillus weihenstephanensis KBAB4
          Length = 309

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 43  NLHFSLQS*QNVSDILCITLYKIKNNGTLPSLVKN 147
           NLH  L S  + ++++   LYK+     LP+LVKN
Sbjct: 116 NLHHELNSVNSANELIKRELYKVVYEWALPNLVKN 150


>UniRef50_Q4SJ00 Cluster: Chromosome 21 SCAF14577, whole genome
            shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
            Chromosome 21 SCAF14577, whole genome shotgun sequence -
            Tetraodon nigroviridis (Green puffer)
          Length = 1560

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = -3

Query: 317  STSRRLVVARS---LKLPKRPPRAEVARAVNSTIFLPLGFLHPPKVFP 183
            S+S R+  AR    L  P  PP A +  + +S++FLP   L PP++ P
Sbjct: 1334 SSSARVRRARPRPRLPPPSTPPPARLQLSPSSSVFLPAAPLLPPRLHP 1381


>UniRef50_Q31PQ5 Cluster: Putative uncharacterized protein; n=3;
           Synechococcus elongatus|Rep: Putative uncharacterized
           protein - Synechococcus sp. (strain PCC 7942) (Anacystis
           nidulans R2)
          Length = 353

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
 Frame = -3

Query: 281 KLPKRPP--RAEVARAVNSTIFLPL-GFLHPPKVFPREKGLQTHSFSIFFTRLG 129
           +L KRPP   AE+         LP+ GF+HPP     E+ L     + FFT  G
Sbjct: 180 ELGKRPPLATAELMLVPVQGAALPVCGFVHPPTELMIEEALSLRGITTFFTIKG 233


>UniRef50_A7GZS1 Cluster: Metalloid reductase RarA; n=1;
           Campylobacter curvus 525.92|Rep: Metalloid reductase
           RarA - Campylobacter curvus 525.92
          Length = 458

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
 Frame = +3

Query: 123 YITKPCKKYRKGMSLK----PFFPRKNLRGMEEPKWKKNCAVNSSSY 251
           Y+T P   +R G + +    PF P KN + M + +W  N AV S  Y
Sbjct: 67  YVTDPLYGFRIGATGQAYGSPFSPEKNAKTMYDKEWYANGAVLSELY 113


>UniRef50_A2U0W8 Cluster: Putative uncharacterized protein; n=3;
           Flavobacteria|Rep: Putative uncharacterized protein -
           Polaribacter dokdonensis MED152
          Length = 363

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -3

Query: 194 KVFPREKGLQTHSFSIFFTRLGNVPLFFILYKVIHN 87
           K+F  +  + + S++  FTRLGNV L+F  +    N
Sbjct: 242 KLFDIQLFMDSASYNYLFTRLGNVLLYFAFFYAFEN 277


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 280,778,634
Number of Sequences: 1657284
Number of extensions: 4920729
Number of successful extensions: 12249
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12249
length of database: 575,637,011
effective HSP length: 83
effective length of database: 438,082,439
effective search space used: 10075896097
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)