Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021253X
         (322 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical pr...    29   0.99 
U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical pr...    29   0.99 
Z37092-3|CAA85454.1|  266|Caenorhabditis elegans Hypothetical pr...    26   7.0  
Z81549-1|CAB04466.1|  343|Caenorhabditis elegans Hypothetical pr...    25   9.2  

>U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical protein
            C23F12.1a protein.
          Length = 2329

 Score = 28.7 bits (61), Expect = 0.99
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 260  RAEVARAVNSTIFLPLGFLHPPKVFPREKGLQ 165
            R E      +T F+P G++ PP+++P + G Q
Sbjct: 2266 RGEAPSPTPATPFIPPGWVAPPQMYPMQPGQQ 2297


>U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical protein
            C23F12.1b protein.
          Length = 2747

 Score = 28.7 bits (61), Expect = 0.99
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 260  RAEVARAVNSTIFLPLGFLHPPKVFPREKGLQ 165
            R E      +T F+P G++ PP+++P + G Q
Sbjct: 2684 RGEAPSPTPATPFIPPGWVAPPQMYPMQPGQQ 2715


>Z37092-3|CAA85454.1|  266|Caenorhabditis elegans Hypothetical
           protein F44F4.3 protein.
          Length = 266

 Score = 25.8 bits (54), Expect = 7.0
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = -2

Query: 189 FSEGKRASNSFLFYIFYK 136
           +SE KRA +S LF++FY+
Sbjct: 32  YSEDKRAFHSRLFHVFYE 49


>Z81549-1|CAB04466.1|  343|Caenorhabditis elegans Hypothetical
           protein F55C9.1 protein.
          Length = 343

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 120 WYITKPCKKYRKGMSLK 170
           ++I KPC++YR G  +K
Sbjct: 303 YFIWKPCREYRGGYDIK 319


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,511,033
Number of Sequences: 27780
Number of extensions: 121143
Number of successful extensions: 246
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 246
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 376873630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)