Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021252X
         (543 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   5.3  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   5.3  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   7.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.0  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   7.0  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   7.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.0  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   9.2  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   9.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.2  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -1

Query: 231 PLYCNAPSRPGAPHYRH 181
           PLY     +  AP YRH
Sbjct: 330 PLYLKHEQQGAAPDYRH 346


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 440 RQHLTRWTSGQRPPYLSW 387
           + HL RW +G+RP   +W
Sbjct: 333 KAHL-RWHTGERPFVCNW 349


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 5/14 (35%), Positives = 9/14 (64%)
 Frame = +3

Query: 246 SLCRWCSAPTGYSW 287
           +L +W +  TG+ W
Sbjct: 339 ALAKWANGQTGFPW 352


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 15/48 (31%), Positives = 18/48 (37%)
 Frame = -1

Query: 345 LKARCWSSSRRRLYGFRAFTTSSQLVRNTICIGTPRPAPLYCNAPSRP 202
           L  R  + + R LYG RA    S +      I   R  PL      RP
Sbjct: 43  LSDRSAAYTNRELYGTRALPLRSAVEHIPDLIADSRRLPLRDAVEKRP 90


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = +1

Query: 208 RRRITVKRSWARCPY 252
           +++I  K+ W++C Y
Sbjct: 114 KKKIRAKKRWSQCMY 128


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = +1

Query: 208 RRRITVKRSWARCPY 252
           +++I  K+ W++C Y
Sbjct: 428 KKKIRAKKRWSQCMY 442


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = +1

Query: 208 RRRITVKRSWARCPY 252
           +++I  K+ W++C Y
Sbjct: 661 KKKIRAKKRWSQCMY 675


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = +1

Query: 208 RRRITVKRSWARCPY 252
           +++I  K+ W++C Y
Sbjct: 661 KKKIRAKKRWSQCMY 675


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 243 PRPAPLYCNAP 211
           PRPAP   NAP
Sbjct: 258 PRPAPASRNAP 268


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 458 PLERRQRQHLTRWTSGQ 408
           PL+R+QR+  T +T+ Q
Sbjct: 215 PLKRKQRRSRTTFTAHQ 231


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -1

Query: 153 NSLGPD*NSSSLCHCSSG 100
           N    D  +S  CHCS G
Sbjct: 158 NGTCEDIGNSHRCHCSDG 175


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,164
Number of Sequences: 336
Number of extensions: 2704
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)