Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021252X
         (543 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456725-1|CAG33006.1|  360|Homo sapiens JM5 protein.                  71   2e-12
BC069206-1|AAH69206.1|  361|Homo sapiens WD repeat domain 45 pro...    71   2e-12
BC003037-1|AAH03037.1|  360|Homo sapiens WD repeat domain 45 pro...    71   2e-12
BC000464-1|AAH00464.1|  360|Homo sapiens WD repeat domain 45 pro...    71   2e-12
AY691428-1|AAV80764.1|  360|Homo sapiens WIPI-4 protein.               71   2e-12
AJ005897-1|CAA06754.1|  360|Homo sapiens JM5 protein.                  71   2e-12
AM182326-1|CAJ57996.1|  344|Homo sapiens WDR45-like protein prot...    47   4e-05
Z81148-1|CAB03541.1|  249|Homo sapiens gonadotropin-releasing ho...    30   4.6  

>CR456725-1|CAG33006.1|  360|Homo sapiens JM5 protein.
          Length = 360

 Score = 71.3 bits (167), Expect = 2e-12
 Identities = 28/53 (52%), Positives = 39/53 (73%)
 Frame = +3

Query: 93  MARRKSSGITSLSFNQDQGCFTCCLKTGLRVYNVEPLVEKAHYSKEELGEVSL 251
           M ++   G+TSL FNQDQ CF C ++TG+R+YNVEPL+EK H   E++G + L
Sbjct: 1   MTQQPLRGVTSLRFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSMGL 53


>BC069206-1|AAH69206.1|  361|Homo sapiens WD repeat domain 45
           protein.
          Length = 361

 Score = 71.3 bits (167), Expect = 2e-12
 Identities = 28/53 (52%), Positives = 39/53 (73%)
 Frame = +3

Query: 93  MARRKSSGITSLSFNQDQGCFTCCLKTGLRVYNVEPLVEKAHYSKEELGEVSL 251
           M ++   G+TSL FNQDQ CF C ++TG+R+YNVEPL+EK H   E++G + L
Sbjct: 1   MTQQPLRGVTSLRFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSMGL 53


>BC003037-1|AAH03037.1|  360|Homo sapiens WD repeat domain 45
           protein.
          Length = 360

 Score = 71.3 bits (167), Expect = 2e-12
 Identities = 28/53 (52%), Positives = 39/53 (73%)
 Frame = +3

Query: 93  MARRKSSGITSLSFNQDQGCFTCCLKTGLRVYNVEPLVEKAHYSKEELGEVSL 251
           M ++   G+TSL FNQDQ CF C ++TG+R+YNVEPL+EK H   E++G + L
Sbjct: 1   MTQQPLRGVTSLRFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSMGL 53


>BC000464-1|AAH00464.1|  360|Homo sapiens WD repeat domain 45
           protein.
          Length = 360

 Score = 71.3 bits (167), Expect = 2e-12
 Identities = 28/53 (52%), Positives = 39/53 (73%)
 Frame = +3

Query: 93  MARRKSSGITSLSFNQDQGCFTCCLKTGLRVYNVEPLVEKAHYSKEELGEVSL 251
           M ++   G+TSL FNQDQ CF C ++TG+R+YNVEPL+EK H   E++G + L
Sbjct: 1   MTQQPLRGVTSLRFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSMGL 53


>AY691428-1|AAV80764.1|  360|Homo sapiens WIPI-4 protein.
          Length = 360

 Score = 71.3 bits (167), Expect = 2e-12
 Identities = 28/53 (52%), Positives = 39/53 (73%)
 Frame = +3

Query: 93  MARRKSSGITSLSFNQDQGCFTCCLKTGLRVYNVEPLVEKAHYSKEELGEVSL 251
           M ++   G+TSL FNQDQ CF C ++TG+R+YNVEPL+EK H   E++G + L
Sbjct: 1   MTQQPLRGVTSLRFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSMGL 53


>AJ005897-1|CAA06754.1|  360|Homo sapiens JM5 protein.
          Length = 360

 Score = 71.3 bits (167), Expect = 2e-12
 Identities = 28/53 (52%), Positives = 39/53 (73%)
 Frame = +3

Query: 93  MARRKSSGITSLSFNQDQGCFTCCLKTGLRVYNVEPLVEKAHYSKEELGEVSL 251
           M ++   G+TSL FNQDQ CF C ++TG+R+YNVEPL+EK H   E++G + L
Sbjct: 1   MTQQPLRGVTSLRFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSMGL 53


>AM182326-1|CAJ57996.1|  344|Homo sapiens WDR45-like protein
           protein.
          Length = 344

 Score = 47.2 bits (107), Expect = 4e-05
 Identities = 18/34 (52%), Positives = 23/34 (67%)
 Frame = +3

Query: 111 SGITSLSFNQDQGCFTCCLKTGLRVYNVEPLVEK 212
           +G+    FNQD GCF C ++ G RVYN +PL EK
Sbjct: 11  NGLLYAGFNQDHGCFACGMENGFRVYNTDPLKEK 44


>Z81148-1|CAB03541.1|  249|Homo sapiens gonadotropin-releasing
           hormone receptor protein.
          Length = 249

 Score = 30.3 bits (65), Expect = 4.6
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = -3

Query: 298 PSFHHE*PVGAEHHLHRDTSPSS 230
           PSFHH   +  ++HLH DT PSS
Sbjct: 180 PSFHHA-DLQCKNHLHPDTGPSS 201


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,486,712
Number of Sequences: 237096
Number of extensions: 1985505
Number of successful extensions: 12623
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12617
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)