Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021252X
         (543 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L23647-2|AAK29995.1|  773|Caenorhabditis elegans Hypothetical pr...    31   0.71 
L23647-1|AAL11102.1|  624|Caenorhabditis elegans Hypothetical pr...    31   0.71 
U80027-12|AAC48126.2|  493|Caenorhabditis elegans Hypothetical p...    30   1.2  
AF047655-1|AAC04402.1|  558|Caenorhabditis elegans Hypothetical ...    30   1.2  
AF003385-2|AAB54249.1|  773|Caenorhabditis elegans Hypothetical ...    29   2.9  
Z83227-3|CAB05726.2|  241|Caenorhabditis elegans Hypothetical pr...    27   6.6  

>L23647-2|AAK29995.1|  773|Caenorhabditis elegans Hypothetical
           protein ZC262.3a protein.
          Length = 773

 Score = 30.7 bits (66), Expect = 0.71
 Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
 Frame = +3

Query: 123 SLSFNQDQG-CFTCCLKTGLRVYNVEPLVEKAHYSKEELGEVSLCRW--CSAPTGYSW*K 293
           S  F+ +Q  C  C L+  L VY    + +  + ++EE+   S C+    +  TG  + K
Sbjct: 329 SFDFSTNQLLCDKCLLQWSLPVYAQTSIRKDCNLTREEIESAS-CKIGVVANDTGIQYGK 387

Query: 294 LGSRTASSCWTTSNVPSKLRWSSSRRYERCG 386
               TA SC++      K+ W   R  E+ G
Sbjct: 388 YEKPTAISCFSYGVPSPKISWWRFRPAEKLG 418


>L23647-1|AAL11102.1|  624|Caenorhabditis elegans Hypothetical
           protein ZC262.3b protein.
          Length = 624

 Score = 30.7 bits (66), Expect = 0.71
 Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
 Frame = +3

Query: 123 SLSFNQDQG-CFTCCLKTGLRVYNVEPLVEKAHYSKEELGEVSLCRW--CSAPTGYSW*K 293
           S  F+ +Q  C  C L+  L VY    + +  + ++EE+   S C+    +  TG  + K
Sbjct: 329 SFDFSTNQLLCDKCLLQWSLPVYAQTSIRKDCNLTREEIESAS-CKIGVVANDTGIQYGK 387

Query: 294 LGSRTASSCWTTSNVPSKLRWSSSRRYERCG 386
               TA SC++      K+ W   R  E+ G
Sbjct: 388 YEKPTAISCFSYGVPSPKISWWRFRPAEKLG 418


>U80027-12|AAC48126.2|  493|Caenorhabditis elegans Hypothetical
           protein T28A11.17 protein.
          Length = 493

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 20  SENVQSENIQNIKSMFMIISRRRRHGAPEEQWHNELE 130
           SEN+  E++ N+  + M++    R  A EEQ  N LE
Sbjct: 359 SENITHEDLPNLLGLRMVMKMVARKSANEEQLKNALE 395


>AF047655-1|AAC04402.1|  558|Caenorhabditis elegans Hypothetical
           protein C17B7.8 protein.
          Length = 558

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 20  SENVQSENIQNIKSMFMIISRRRRHGAPEEQWHNELE 130
           SEN+  E++ N+  + M++    R  A EEQ  N LE
Sbjct: 401 SENITHEDLPNLLGLRMVMKMVARKSANEEQLKNALE 437


>AF003385-2|AAB54249.1|  773|Caenorhabditis elegans Hypothetical
           protein R08F11.7 protein.
          Length = 773

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 315 RRLYGFRAFTTSSQLVRNTICIGTPRPA 232
           RRL G  ++T   Q +RNT   G+P P+
Sbjct: 229 RRLLGTTSYTDGLQAIRNTSVTGSPLPS 256


>Z83227-3|CAB05726.2|  241|Caenorhabditis elegans Hypothetical
           protein F45B8.3 protein.
          Length = 241

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -1

Query: 264 NTICIGTPRPAPLYCNAPSRP 202
           N  C   PRPAP  C+AP RP
Sbjct: 171 NPCCQPAPRPAPCVCSAP-RP 190


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,102,713
Number of Sequences: 27780
Number of extensions: 279383
Number of successful extensions: 793
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)