Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021250X
         (537 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127870-1|BAC87170.1|  174|Homo sapiens protein ( Homo sapiens ...    30   6.0  
AK127248-1|BAC86899.1|  596|Homo sapiens protein ( Homo sapiens ...    29   7.9  

>AK127870-1|BAC87170.1|  174|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45974 fis, clone PLACE7018452. ).
          Length = 174

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 11/42 (26%), Positives = 24/42 (57%)
 Frame = +2

Query: 140 AINNRWMACWRTEDTNFRAPLSNENFVQRSFKKNYRQCSQHV 265
           +++ R +ACW      F  PLSN +  +R++ ++    S+++
Sbjct: 91  SLHTRLIACWFRPSAGFSLPLSNSHTAERAYGRDEAVHSKNI 132


>AK127248-1|BAC86899.1|  596|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45315 fis, clone BRHIP3005231. ).
          Length = 596

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
 Frame = +2

Query: 254 SQHVTF-NLTWTSSSVPVEHPKDWNEKLAAQTLA-LEPWRDSQW----SSMLGKWDEGSW 415
           SQ ++F +L     S    +P   +  L  QTL    P   + W    +S  G+W EG W
Sbjct: 528 SQVISFMSLLCVQVSFRPPNPSAISTALCPQTLRHASPTMSTGWPWLSNSGTGRWKEGCW 587

Query: 416 LQWGTVQG 439
             WG+  G
Sbjct: 588 SPWGSFIG 595


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,349,050
Number of Sequences: 237096
Number of extensions: 1887964
Number of successful extensions: 4515
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4515
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)