Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021250X
         (537 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   1.5  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   1.5  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   1.5  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    23   2.6  
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    21   6.0  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    21   6.0  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    21   8.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.0  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = +3

Query: 348 WLWNHGEIVNGRR 386
           ++W+ G+IVNG+R
Sbjct: 146 YIWHPGKIVNGKR 158


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -1

Query: 195 ALKFVSSVRQHAIHLLLIAMLQPVCRDNPSVR 100
           A++F  S+ ++A      A+++ +CRDNP+ R
Sbjct: 583 AIEFPRSITRNAT-----ALIKKLCRDNPAER 609


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = +3

Query: 348 WLWNHGEIVNGRR 386
           ++W+ G+IVNG+R
Sbjct: 146 YIWHPGKIVNGKR 158


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/45 (20%), Positives = 21/45 (46%)
 Frame = +2

Query: 179 DTNFRAPLSNENFVQRSFKKNYRQCSQHVTFNLTWTSSSVPVEHP 313
           + N++   +N N+   ++  NY    + + +N+      +PV  P
Sbjct: 326 NNNYKYNYNNNNYNNNNYNNNYNNNCKKLYYNII-NIEQIPVPVP 369


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +2

Query: 248 QCSQHVTFNLTWTSSSVPVEHPKDWNE 328
           QCS   T  +    S +   +PK+W++
Sbjct: 82  QCSPEETRQIKKVLSHIQRTYPKEWSK 108


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +2

Query: 248 QCSQHVTFNLTWTSSSVPVEHPKDWNE 328
           QCS   T  +    S +   +PK+W++
Sbjct: 82  QCSPEETRQIKKVLSHIQRTYPKEWSK 108


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -2

Query: 515 CLFSLLEFAGI 483
           C+ +LLEFAG+
Sbjct: 318 CIATLLEFAGV 328


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +2

Query: 74   YKIKRRHILR 103
            YK+K RH++R
Sbjct: 1078 YKVKERHLMR 1087


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,538
Number of Sequences: 438
Number of extensions: 3830
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15213684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)