Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021248
(648 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 5e-14
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 5e-10
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 60 1e-09
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 59 4e-09
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 56 2e-08
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 52 3e-07
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 49 4e-06
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 44 8e-05
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 44 1e-04
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 41 8e-04
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 38 0.009
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 36 0.021
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 36 0.021
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.066
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.087
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.087
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 34 0.11
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 33 0.20
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 33 0.20
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 33 0.20
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 33 0.26
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 30 1.4
SB_3046| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0) 29 3.3
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 29 4.3
SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07) 28 7.5
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 74.9 bits (176), Expect = 5e-14
Identities = 31/84 (36%), Positives = 50/84 (59%)
Frame = +2
Query: 257 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 436
+PFNKNFY+ HP + K+S E+++ R K + VSG P F F + + ++
Sbjct: 475 KPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDEQMMASIRK 534
Query: 437 MGYKEPTPIQAQGWPIAMSGKNLV 508
+ Y +PT IQ Q PIA+SG++++
Sbjct: 535 LEYTQPTQIQCQALPIALSGRDII 558
Score = 65.7 bits (153), Expect = 3e-11
Identities = 28/45 (62%), Positives = 37/45 (82%)
Frame = +3
Query: 513 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 647
++TGSGKT A++ PA+VHI +QP ++ GDGPI L+ APTREL QQ
Sbjct: 561 AKTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQ 605
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 61.7 bits (143), Expect = 5e-10
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 433
QPF K+FY P + K +P E +E+R E + V G P++ + + + +K
Sbjct: 62 QPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKILDVLK 121
Query: 434 TMGYKEPTPIQAQGWPIAMSGKNLVA 511
Y++PTPIQAQ P+ MSG++++A
Sbjct: 122 KNSYEKPTPIQAQAIPVIMSGRDMIA 147
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 531 KTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 647
K +Y P + P I G IA+V+ PTRELA Q
Sbjct: 121 KKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQ 159
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/56 (48%), Positives = 36/56 (64%)
Frame = +2
Query: 305 RSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 472
R +EV+ YR ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ 112
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = +3
Query: 543 YILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 647
+ILP IVHIN+QP ++ GDGPI LVL PTRELAQQ
Sbjct: 113 FILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQ 147
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 58.8 bits (136), Expect = 4e-09
Identities = 25/77 (32%), Positives = 45/77 (58%)
Frame = +2
Query: 278 YDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 457
Y HPT+ + +V++ R+K E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 458 PIQAQGWPIAMSGKNLV 508
PIQ Q P+ +SG++++
Sbjct: 221 PIQMQVLPVLLSGRDVM 237
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = +3
Query: 513 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 647
++TGSGKTLAY LP + + + P GD P+AL+L PTREL QQ
Sbjct: 116 AETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQ 160
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/82 (29%), Positives = 43/82 (52%)
Frame = +2
Query: 263 FNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 442
F ++YD + V + S V+E R K+ + + G + PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 443 YKEPTPIQAQGWPIAMSGKNLV 508
++ PTPIQ Q MSG++++
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDII 113
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 4/49 (8%)
Frame = +3
Query: 513 SQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQ 647
++TGSGKT A+ +P +V I P I R + GP AL+LAPTRELAQQ
Sbjct: 145 AETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQ 193
Score = 50.8 bits (116), Expect = 9e-07
Identities = 20/60 (33%), Positives = 36/60 (60%)
Frame = +2
Query: 329 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
+R ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + ++++
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDII 142
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Frame = +2
Query: 317 EVEEYRNKHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 484
++ +R++ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
Query: 485 AMSG 496
G
Sbjct: 197 MAHG 200
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +3
Query: 513 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 647
+QTGSGKT AY+LP + + Q P+AL +APTRELA+Q
Sbjct: 523 AQTGSGKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQ 567
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +2
Query: 353 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
VSG I F E F + + + GY+ PTP+Q PI M+G++L+A
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMA 521
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 44.4 bits (100), Expect = 8e-05
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = +2
Query: 323 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 502
E+Y ++ EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++
Sbjct: 692 EKY-DQIEVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRD 750
Query: 503 LVA 511
++A
Sbjct: 751 VMA 753
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +3
Query: 513 SQTGSGKTLAYILPAIVHINN----QPPIRRGDGPIALVLAPTRELAQQ 647
+QTGSGKT A++LP + + N P A+ +APTRELA Q
Sbjct: 755 AQTGSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQ 803
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 44.4 bits (100), Expect = 8e-05
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = +2
Query: 323 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 502
E+Y ++ EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++
Sbjct: 115 EKY-DQIEVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRD 173
Query: 503 LVA 511
++A
Sbjct: 174 VMA 176
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/47 (44%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Frame = +3
Query: 510 RSQTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTRELAQQ 647
+++TG+GKTL++ LP + + + + +RG P LV+APTRELA+Q
Sbjct: 116 QARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQ 162
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +3
Query: 513 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 647
++TGSGKTLA+++P I + Q DG ALV++PTRELA Q
Sbjct: 94 AKTGSGKTLAFLIPIIETLWRQKWTSM-DGLGALVISPTRELAYQ 137
Score = 31.9 bits (69), Expect = 0.46
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 380 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
++ F + G+ G+ PT IQ QG P+A+SG++++
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVL 91
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +3
Query: 510 RSQTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQ 647
++Q+G+GKT + + + I+ + G D ALVLAPTRELAQQ
Sbjct: 128 QAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQ 174
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 37.5 bits (83), Expect = 0.009
Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = +3
Query: 513 SQTGSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQQ 647
+QTGSGKTLAY+ P +VH + R G P A ++ P RELA Q
Sbjct: 422 AQTGSGKTLAYLAP-LVHRLREDEERHGILARLKRPRACIVVPARELATQ 470
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/45 (37%), Positives = 32/45 (71%)
Frame = +3
Query: 513 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 647
++TGSGKTLA+++P +V + + + +G ++++PTREL+ Q
Sbjct: 616 AKTGSGKTLAFLVP-VVELLYKLQFKTRNGTGVIIISPTRELSLQ 659
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 36.3 bits (80), Expect = 0.021
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +3
Query: 507 LRSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 647
++S+TG+GK+L ++LP++ Q P RG G I ++ PTRELA Q
Sbjct: 202 IKSETGTGKSLVFLLPSV-----QDP-GRGYGTI--IVVPTRELASQ 240
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 36.3 bits (80), Expect = 0.021
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = +3
Query: 513 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 647
++TGSGKT A+ LP + + + P G A+VL PTRELA Q
Sbjct: 51 AKTGSGKTAAFALPILQKLCDDP-----YGIFAVVLTPTRELAFQ 90
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 34.7 bits (76), Expect = 0.066
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 14/59 (23%)
Frame = +3
Query: 513 SQTGSGKTLAYILPAIVHIN-------NQPPI-------RRGDGPIALVLAPTRELAQQ 647
++TGSGKTLA+ +P I HI Q P +G +AL++APTRELA Q
Sbjct: 175 AETGSGKTLAFGIPIIQHIEAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQ 233
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 34.3 bits (75), Expect = 0.087
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = +3
Query: 510 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 647
++Q+G+GKT + + + I+ Q +R P ALVL+PTRELA Q
Sbjct: 40 QAQSGTGKTATFSISVLQAIDTQ--LRE---PQALVLSPTRELANQ 80
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 34.3 bits (75), Expect = 0.087
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +3
Query: 513 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 647
++TGSGKT A+++P + G AL+L+PTRELA Q
Sbjct: 325 ARTGSGKTAAFLIPMFEKLQTH---TAKVGIRALILSPTRELALQ 366
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 380 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
I FE+ + + + V GYK+PTP+Q PI ++L+A
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMA 917
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 513 SQTGSGKTLAYILPAIVHINNQPP 584
+QTGSGKT A+++P + I + P
Sbjct: 919 AQTGSGKTAAFLIPILSRIYMEGP 942
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = +3
Query: 513 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 647
++TGSGKT A+ LP + + + P AL+L PTRELA Q
Sbjct: 8 AETGSGKTGAFALPILQALLDNP-----QRLFALILTPTRELAFQ 47
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 519 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 647
TG+GKT A++LP + + +P + LV+ PTRELA Q
Sbjct: 56 TGTGKTAAFMLPILERLLYRP--TQSPAIRVLVITPTRELAIQ 96
Score = 32.7 bits (71), Expect = 0.26
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 422 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
+ V +G+ PTPIQA P+A+ GK++ A
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDVCA 52
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 33.1 bits (72), Expect = 0.20
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +3
Query: 510 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 647
R++ G+GKT AY++P + + + ALVL PTRELA Q
Sbjct: 90 RAKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQ 130
Score = 32.3 bits (70), Expect = 0.35
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
FE+ + G+ G+ +P+PIQ + P+A++G++++A
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILA 89
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 33.1 bits (72), Expect = 0.20
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +3
Query: 510 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 647
R++ G+GKT AY++P + + + ALVL PTRELA Q
Sbjct: 90 RAKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQ 130
Score = 32.3 bits (70), Expect = 0.35
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
FE+ + G+ G+ +P+PIQ + P+A++G++++A
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILA 89
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +3
Query: 510 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 647
+SQ+G+GKT A++L + ++ P P + L+PT ELA+Q
Sbjct: 148 QSQSGTGKTAAFVLTMLSRVDATKPY-----PQVICLSPTYELARQ 188
Score = 31.1 bits (67), Expect = 0.81
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +2
Query: 338 KHEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMS 493
KHEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ ++
Sbjct: 85 KHEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLA 139
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +2
Query: 365 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 478
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 505
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 311 PYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 442
P+E + + KH++ V+ VE + +Q +E F + ++Q VK G
Sbjct: 252 PFEPPKPKTKHKLDVATVEDYKKLQEYEREKFTEMIKQ-VKDTG 294
>SB_3046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 734
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 195 HQSLQILQIYCHRCQTETNYRRICCLLQIWNHRFHGY 85
H L YC RC T CCLLQ++++ ++G+
Sbjct: 484 HLQQPSLAAYC-RCITILTTAIACCLLQVYHNTYNGH 519
>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
Length = 675
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 323 EEYRNK-HEVTVSGVEVHNPIQYFEEANFPDY 415
EE NK H++ + + +HNP YFE+ + DY
Sbjct: 234 EEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +3
Query: 522 GSGKTLAYILPAIVHINNQPPIRR---GDGPIALVL 620
GSGK LAY+LP I I + +GP+ L+L
Sbjct: 234 GSGKRLAYLLPIIHQITESSVYQELPLANGPLVLIL 269
>SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07)
Length = 401
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 219 ALQRILFSHQSLQILQIYCHRCQTETNYRRICCLLQIWN-HRFHGYYSS 76
AL+RI + ++ C +YRR CC L +W H + Y+SS
Sbjct: 197 ALERIATPVTTSKLRCSTTQECCVRVDYRRKCC-LHVWRVHTTNTYWSS 244
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,236,833
Number of Sequences: 59808
Number of extensions: 406869
Number of successful extensions: 1114
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1101
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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