Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021247
(681 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC014079-1|AAH14079.2| 480|Homo sapiens PMPCB protein protein. 142 1e-33
BC010398-1|AAH10398.1| 490|Homo sapiens PMPCB protein protein. 142 1e-33
L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c re... 107 3e-23
D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein. 107 3e-23
BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c ... 107 3e-23
AL050216-1|CAB43319.1| 316|Homo sapiens hypothetical protein pr... 98 2e-20
D50913-1|BAA09472.1| 528|Homo sapiens KIAA0123 protein. 67 5e-11
D21064-1|BAA04643.1| 528|Homo sapiens KIAA0123 protein. 67 5e-11
BC132724-1|AAI32725.1| 525|Homo sapiens peptidase (mitochondria... 67 5e-11
BC111399-1|AAI11400.1| 525|Homo sapiens peptidase (mitochondria... 67 5e-11
BC033103-1|AAH33103.2| 526|Homo sapiens PMPCA protein protein. 67 5e-11
BC022949-1|AAH22949.1| 521|Homo sapiens PMPCA protein protein. 67 5e-11
AL592301-14|CAI13945.1| 525|Homo sapiens peptidase (mitochondri... 67 5e-11
BC056401-1|AAH56401.1| 679|Homo sapiens CENTD2 protein protein. 31 2.9
BC008315-1|AAH08315.1| 595|Homo sapiens Unknown (protein for IM... 31 2.9
AY553630-1|AAT36325.1| 1450|Homo sapiens ARAP1b protein protein. 31 2.9
AY049732-1|AAL12169.1| 1210|Homo sapiens ARAP1 protein. 31 2.9
AJ621557-1|CAF21317.1| 1450|Homo sapiens ARAP1 protein. 31 2.9
AF411983-1|AAL04167.1| 1136|Homo sapiens centaurin delta2 protein. 31 2.9
AB018325-1|BAA34502.2| 1281|Homo sapiens KIAA0782 protein protein. 31 2.9
AB209473-1|BAD92710.1| 1474|Homo sapiens centaurin delta 2 isofo... 31 3.8
AF092564-1|AAC72361.1| 1202|Homo sapiens chromosome-associated p... 30 6.6
AB019987-1|BAA73535.1| 1288|Homo sapiens chromosome-associated p... 30 6.6
>BC014079-1|AAH14079.2| 480|Homo sapiens PMPCB protein protein.
Length = 480
Score = 142 bits (344), Expect = 1e-33
Identities = 69/85 (81%), Positives = 77/85 (90%)
Frame = +1
Query: 1 KRSQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIE 180
KRSQ DLEL +ENMGAHLNAYTSREQTV+YAK + D+P AVEILADIIQNS+L E EIE
Sbjct: 104 KRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIE 163
Query: 181 RERGVILREMQDVESNLQEVVFDHL 255
RERGVILREMQ+VE+NLQEVVFD+L
Sbjct: 164 RERGVILREMQEVETNLQEVVFDYL 188
Score = 98.3 bits (234), Expect = 2e-20
Identities = 49/87 (56%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Frame = +3
Query: 255 HATAFQGTPLGQTILGPTKNIKKISKADLQSYIRNHYQPGRIVLSGAGGVEHERLVDLAS 434
HATA+Q T LG+TILGPT+NIK IS+ DL YI HY+ RIVL+ AGGV H+ L+DLA
Sbjct: 189 HATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKGPRIVLAAAGGVSHDELLDLAK 248
Query: 435 KHF-SGLKNSACDV-ELTPCRYTGSEI 509
HF L ++ L PC++TGSEI
Sbjct: 249 FHFGDSLCTHKGEIPALPPCKFTGSEI 275
Score = 58.0 bits (134), Expect = 3e-08
Identities = 27/36 (75%), Positives = 28/36 (77%)
Frame = +2
Query: 509 RVRDDSMPLAHVAIAVEGAGWTDADNIPLMVANTLI 616
RVRDD MPLAH+AIAVE GW D I LMVANTLI
Sbjct: 276 RVRDDKMPLAHLAIAVEAVGWAHPDTICLMVANTLI 311
>BC010398-1|AAH10398.1| 490|Homo sapiens PMPCB protein protein.
Length = 490
Score = 142 bits (344), Expect = 1e-33
Identities = 69/85 (81%), Positives = 77/85 (90%)
Frame = +1
Query: 1 KRSQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIE 180
KRSQ DLEL +ENMGAHLNAYTSREQTV+YAK + D+P AVEILADIIQNS+L E EIE
Sbjct: 113 KRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIE 172
Query: 181 RERGVILREMQDVESNLQEVVFDHL 255
RERGVILREMQ+VE+NLQEVVFD+L
Sbjct: 173 RERGVILREMQEVETNLQEVVFDYL 197
Score = 98.3 bits (234), Expect = 2e-20
Identities = 49/87 (56%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Frame = +3
Query: 255 HATAFQGTPLGQTILGPTKNIKKISKADLQSYIRNHYQPGRIVLSGAGGVEHERLVDLAS 434
HATA+Q T LG+TILGPT+NIK IS+ DL YI HY+ RIVL+ AGGV H+ L+DLA
Sbjct: 198 HATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKGPRIVLAAAGGVSHDELLDLAK 257
Query: 435 KHF-SGLKNSACDV-ELTPCRYTGSEI 509
HF L ++ L PC++TGSEI
Sbjct: 258 FHFGDSLCTHKGEIPALPPCKFTGSEI 284
Score = 58.0 bits (134), Expect = 3e-08
Identities = 27/36 (75%), Positives = 28/36 (77%)
Frame = +2
Query: 509 RVRDDSMPLAHVAIAVEGAGWTDADNIPLMVANTLI 616
RVRDD MPLAH+AIAVE GW D I LMVANTLI
Sbjct: 285 RVRDDKMPLAHLAIAVEAVGWAHPDTICLMVANTLI 320
>L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core I protein protein.
Length = 480
Score = 107 bits (258), Expect = 3e-23
Identities = 48/88 (54%), Positives = 66/88 (75%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 HATAFQGTPLGQTILGPTKNIKKISKADLQSYIRNHYQPGRIVLSGAGGVEHERLVDLAS 434
HATAFQGTPL Q + GP++N++K+S+ADL Y+ HY+ R+VL+ AGGVEH++L+DLA
Sbjct: 188 HATAFQGTPLAQAVEGPSENVRKLSRADLTEYLSTHYKAPRMVLAAAGGVEHQQLLDLAQ 247
Query: 435 KHFSGLKNSACD---VELTPCRYTGSEI 509
KH G+ + + LTPCR+TGSEI
Sbjct: 248 KHLGGIPWTYAEDAVPTLTPCRFTGSEI 275
Score = 100 bits (240), Expect = 4e-21
Identities = 46/84 (54%), Positives = 67/84 (79%)
Frame = +1
Query: 4 RSQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIER 183
R + LE VE+MGAHLNAY++RE T +Y K L+ D+P AVE+L DI+QN SL + +IE+
Sbjct: 104 RPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLGDIVQNCSLEDSQIEK 163
Query: 184 ERGVILREMQDVESNLQEVVFDHL 255
ER VILREMQ+ ++++++VVF++L
Sbjct: 164 ERDVILREMQENDASMRDVVFNYL 187
Score = 52.4 bits (120), Expect = 1e-06
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +2
Query: 509 RVRDDSMPLAHVAIAVEGAGWTDADNIPLMVANTLI 616
R RDD++P AHVAIAVEG GW D++ L VAN +I
Sbjct: 276 RHRDDALPFAHVAIAVEGPGWASPDSVALQVANAII 311
>D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein.
Length = 480
Score = 107 bits (258), Expect = 3e-23
Identities = 48/88 (54%), Positives = 66/88 (75%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 HATAFQGTPLGQTILGPTKNIKKISKADLQSYIRNHYQPGRIVLSGAGGVEHERLVDLAS 434
HATAFQGTPL Q + GP++N++K+S+ADL Y+ HY+ R+VL+ AGGVEH++L+DLA
Sbjct: 188 HATAFQGTPLAQAVEGPSENVRKLSRADLTEYLSTHYKAPRMVLAAAGGVEHQQLLDLAQ 247
Query: 435 KHFSGLKNSACD---VELTPCRYTGSEI 509
KH G+ + + LTPCR+TGSEI
Sbjct: 248 KHLGGIPWTYAEDAVPTLTPCRFTGSEI 275
Score = 100 bits (240), Expect = 4e-21
Identities = 46/84 (54%), Positives = 67/84 (79%)
Frame = +1
Query: 4 RSQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIER 183
R + LE VE+MGAHLNAY++RE T +Y K L+ D+P AVE+L DI+QN SL + +IE+
Sbjct: 104 RPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLGDIVQNCSLEDSQIEK 163
Query: 184 ERGVILREMQDVESNLQEVVFDHL 255
ER VILREMQ+ ++++++VVF++L
Sbjct: 164 ERDVILREMQENDASMRDVVFNYL 187
Score = 54.4 bits (125), Expect = 4e-07
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +2
Query: 509 RVRDDSMPLAHVAIAVEGAGWTDADNIPLMVANTLI 616
R RDD++P AHVAIAVEG GW DN+ L VAN +I
Sbjct: 276 RHRDDALPFAHVAIAVEGPGWASPDNVALQVANAII 311
>BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core protein I protein.
Length = 480
Score = 107 bits (258), Expect = 3e-23
Identities = 48/88 (54%), Positives = 66/88 (75%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 HATAFQGTPLGQTILGPTKNIKKISKADLQSYIRNHYQPGRIVLSGAGGVEHERLVDLAS 434
HATAFQGTPL Q + GP++N++K+S+ADL Y+ HY+ R+VL+ AGGVEH++L+DLA
Sbjct: 188 HATAFQGTPLAQAVEGPSENVRKLSRADLTEYLSTHYKAPRMVLAAAGGVEHQQLLDLAQ 247
Query: 435 KHFSGLKNSACD---VELTPCRYTGSEI 509
KH G+ + + LTPCR+TGSEI
Sbjct: 248 KHLGGIPWTYAEDAVPTLTPCRFTGSEI 275
Score = 100 bits (240), Expect = 4e-21
Identities = 46/84 (54%), Positives = 67/84 (79%)
Frame = +1
Query: 4 RSQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIER 183
R + LE VE+MGAHLNAY++RE T +Y K L+ D+P AVE+L DI+QN SL + +IE+
Sbjct: 104 RPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLGDIVQNCSLEDSQIEK 163
Query: 184 ERGVILREMQDVESNLQEVVFDHL 255
ER VILREMQ+ ++++++VVF++L
Sbjct: 164 ERDVILREMQENDASMRDVVFNYL 187
Score = 54.4 bits (125), Expect = 4e-07
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +2
Query: 509 RVRDDSMPLAHVAIAVEGAGWTDADNIPLMVANTLI 616
R RDD++P AHVAIAVEG GW DN+ L VAN +I
Sbjct: 276 RHRDDALPFAHVAIAVEGPGWASPDNVALQVANAII 311
>AL050216-1|CAB43319.1| 316|Homo sapiens hypothetical protein
protein.
Length = 316
Score = 98.3 bits (234), Expect = 2e-20
Identities = 49/87 (56%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Frame = +3
Query: 255 HATAFQGTPLGQTILGPTKNIKKISKADLQSYIRNHYQPGRIVLSGAGGVEHERLVDLAS 434
HATA+Q T LG+TILGPT+NIK IS+ DL YI HY+ RIVL+ AGGV H+ L+DLA
Sbjct: 25 HATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKGPRIVLAAAGGVSHDELLDLAK 84
Query: 435 KHF-SGLKNSACDV-ELTPCRYTGSEI 509
HF L ++ L PC++TGSEI
Sbjct: 85 FHFGDSLCTHKGEIPALPPCKFTGSEI 111
Score = 58.0 bits (134), Expect = 3e-08
Identities = 27/36 (75%), Positives = 28/36 (77%)
Frame = +2
Query: 509 RVRDDSMPLAHVAIAVEGAGWTDADNIPLMVANTLI 616
RVRDD MPLAH+AIAVE GW D I LMVANTLI
Sbjct: 112 RVRDDKMPLAHLAIAVEAVGWAHPDTICLMVANTLI 147
Score = 42.7 bits (96), Expect = 0.001
Identities = 19/22 (86%), Positives = 22/22 (100%)
Frame = +1
Query: 190 GVILREMQDVESNLQEVVFDHL 255
GVILREMQ+VE+NLQEVVFD+L
Sbjct: 3 GVILREMQEVETNLQEVVFDYL 24
>D50913-1|BAA09472.1| 528|Homo sapiens KIAA0123 protein.
Length = 528
Score = 67.3 bits (157), Expect = 5e-11
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Frame = +3
Query: 255 HATAFQGTPLGQTILGPTKNIKKISKADLQSYIRNHYQPGRIVLSGAGGVEHERLVDLAS 434
H A++ +G PT+N+ KI++ L SY+RN+Y P R+VL+G GVEHE LVD A
Sbjct: 213 HEAAYRENTVGLHRFCPTENVAKINREVLHSYLRNYYTPDRMVLAGV-GVEHEHLVDCAR 271
Query: 435 KHFSGLKNS-----ACDVELTPCRYTG 500
K+ G++ + A D++ + +YTG
Sbjct: 272 KYLLGVQPAWGSAEAVDIDRSVAQYTG 298
Score = 38.3 bits (85), Expect = 0.025
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +1
Query: 7 SQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERE 186
S+ ++ L +E G + TSR+ T++ + + V +LAD++ L + E+E
Sbjct: 128 SKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRLTDEEVEMT 187
Query: 187 RGVILREMQDV 219
R + E++D+
Sbjct: 188 RMAVQFELEDL 198
>D21064-1|BAA04643.1| 528|Homo sapiens KIAA0123 protein.
Length = 528
Score = 67.3 bits (157), Expect = 5e-11
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Frame = +3
Query: 255 HATAFQGTPLGQTILGPTKNIKKISKADLQSYIRNHYQPGRIVLSGAGGVEHERLVDLAS 434
H A++ +G PT+N+ KI++ L SY+RN+Y P R+VL+G GVEHE LVD A
Sbjct: 213 HEAAYRENTVGLHRFCPTENVAKINREVLHSYLRNYYTPDRMVLAGV-GVEHEHLVDCAR 271
Query: 435 KHFSGLKNS-----ACDVELTPCRYTG 500
K+ G++ + A D++ + +YTG
Sbjct: 272 KYLLGVQPAWGSAEAVDIDRSVAQYTG 298
Score = 38.3 bits (85), Expect = 0.025
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +1
Query: 7 SQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERE 186
S+ ++ L +E G + TSR+ T++ + + V +LAD++ L + E+E
Sbjct: 128 SKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRLTDEEVEMT 187
Query: 187 RGVILREMQDV 219
R + E++D+
Sbjct: 188 RMAVQFELEDL 198
>BC132724-1|AAI32725.1| 525|Homo sapiens peptidase (mitochondrial
processing) alpha protein.
Length = 525
Score = 67.3 bits (157), Expect = 5e-11
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Frame = +3
Query: 255 HATAFQGTPLGQTILGPTKNIKKISKADLQSYIRNHYQPGRIVLSGAGGVEHERLVDLAS 434
H A++ +G PT+N+ KI++ L SY+RN+Y P R+VL+G GVEHE LVD A
Sbjct: 210 HEAAYRENTVGLHRFCPTENVAKINREVLHSYLRNYYTPDRMVLAGV-GVEHEHLVDCAR 268
Query: 435 KHFSGLKNS-----ACDVELTPCRYTG 500
K+ G++ + A D++ + +YTG
Sbjct: 269 KYLLGVQPAWGSAEAVDIDRSVAQYTG 295
Score = 38.3 bits (85), Expect = 0.025
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +1
Query: 7 SQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERE 186
S+ ++ L +E G + TSR+ T++ + + V +LAD++ L + E+E
Sbjct: 125 SKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRLTDEEVEMT 184
Query: 187 RGVILREMQDV 219
R + E++D+
Sbjct: 185 RMAVQFELEDL 195
>BC111399-1|AAI11400.1| 525|Homo sapiens peptidase (mitochondrial
processing) alpha protein.
Length = 525
Score = 67.3 bits (157), Expect = 5e-11
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Frame = +3
Query: 255 HATAFQGTPLGQTILGPTKNIKKISKADLQSYIRNHYQPGRIVLSGAGGVEHERLVDLAS 434
H A++ +G PT+N+ KI++ L SY+RN+Y P R+VL+G GVEHE LVD A
Sbjct: 210 HEAAYRENTVGLHRFCPTENVAKINREVLHSYLRNYYTPDRMVLAGV-GVEHEHLVDCAR 268
Query: 435 KHFSGLKNS-----ACDVELTPCRYTG 500
K+ G++ + A D++ + +YTG
Sbjct: 269 KYLLGVQPAWGSAEAVDIDRSVAQYTG 295
Score = 38.3 bits (85), Expect = 0.025
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +1
Query: 7 SQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERE 186
S+ ++ L +E G + TSR+ T++ + + V +LAD++ L + E+E
Sbjct: 125 SKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRLTDEEVEMT 184
Query: 187 RGVILREMQDV 219
R + E++D+
Sbjct: 185 RMAVQFELEDL 195
>BC033103-1|AAH33103.2| 526|Homo sapiens PMPCA protein protein.
Length = 526
Score = 67.3 bits (157), Expect = 5e-11
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Frame = +3
Query: 255 HATAFQGTPLGQTILGPTKNIKKISKADLQSYIRNHYQPGRIVLSGAGGVEHERLVDLAS 434
H A++ +G PT+N+ KI++ L SY+RN+Y P R+VL+G GVEHE LVD A
Sbjct: 211 HEAAYRENTVGLHRFCPTENVAKINREVLHSYLRNYYTPDRMVLAGV-GVEHEHLVDCAR 269
Query: 435 KHFSGLKNS-----ACDVELTPCRYTG 500
K+ G++ + A D++ + +YTG
Sbjct: 270 KYLLGVQPAWGSAEAVDIDRSVAQYTG 296
Score = 38.3 bits (85), Expect = 0.025
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +1
Query: 7 SQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERE 186
S+ ++ L +E G + TSR+ T++ + + V +LAD++ L + E+E
Sbjct: 126 SKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRLTDEEVEMT 185
Query: 187 RGVILREMQDV 219
R + E++D+
Sbjct: 186 RMAVQFELEDL 196
>BC022949-1|AAH22949.1| 521|Homo sapiens PMPCA protein protein.
Length = 521
Score = 67.3 bits (157), Expect = 5e-11
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Frame = +3
Query: 255 HATAFQGTPLGQTILGPTKNIKKISKADLQSYIRNHYQPGRIVLSGAGGVEHERLVDLAS 434
H A++ +G PT+N+ KI++ L SY+RN+Y P R+VL+G GVEHE LVD A
Sbjct: 206 HEAAYRENTVGLHRFCPTENVAKINREVLHSYLRNYYTPDRMVLAGV-GVEHEHLVDCAR 264
Query: 435 KHFSGLKNS-----ACDVELTPCRYTG 500
K+ G++ + A D++ + +YTG
Sbjct: 265 KYLLGVQPAWGSAEAVDIDRSVAQYTG 291
Score = 38.3 bits (85), Expect = 0.025
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +1
Query: 7 SQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERE 186
S+ ++ L +E G + TSR+ T++ + + V +LAD++ L + E+E
Sbjct: 121 SKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRLTDEEVEMT 180
Query: 187 RGVILREMQDV 219
R + E++D+
Sbjct: 181 RMAVQFELEDL 191
>AL592301-14|CAI13945.1| 525|Homo sapiens peptidase (mitochondrial
processing) alpha protein.
Length = 525
Score = 67.3 bits (157), Expect = 5e-11
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Frame = +3
Query: 255 HATAFQGTPLGQTILGPTKNIKKISKADLQSYIRNHYQPGRIVLSGAGGVEHERLVDLAS 434
H A++ +G PT+N+ KI++ L SY+RN+Y P R+VL+G GVEHE LVD A
Sbjct: 210 HEAAYRENTVGLHRFCPTENVAKINREVLHSYLRNYYTPDRMVLAGV-GVEHEHLVDCAR 268
Query: 435 KHFSGLKNS-----ACDVELTPCRYTG 500
K+ G++ + A D++ + +YTG
Sbjct: 269 KYLLGVQPAWGSAEAVDIDRSVAQYTG 295
Score = 38.3 bits (85), Expect = 0.025
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +1
Query: 7 SQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERE 186
S+ ++ L +E G + TSR+ T++ + + V +LAD++ L + E+E
Sbjct: 125 SKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRLTDEEVEMT 184
Query: 187 RGVILREMQDV 219
R + E++D+
Sbjct: 185 RMAVQFELEDL 195
>BC056401-1|AAH56401.1| 679|Homo sapiens CENTD2 protein protein.
Length = 679
Score = 31.5 bits (68), Expect = 2.9
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Frame = +1
Query: 40 MGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGVILREMQDV 219
+GA A S T+ + +D+PV V D I L I R+ G + + +
Sbjct: 186 LGAIQKAAASMGDTLSEQQLGDSDIPVIVYRCVDYITQCGLTSEGIYRKCGQTSKTQRLL 245
Query: 220 ESNLQEVVFDHLT--QQH-SKVPHWVKQFL-DLPK-ILRKSLRLTY 342
ES Q+ HL +QH V +K+FL DLP + ++ RLT+
Sbjct: 246 ESLRQDARSVHLKEGEQHVDDVSSALKRFLRDLPDGLFTRAQRLTW 291
>BC008315-1|AAH08315.1| 595|Homo sapiens Unknown (protein for
IMAGE:3161752) protein.
Length = 595
Score = 31.5 bits (68), Expect = 2.9
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Frame = +1
Query: 40 MGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGVILREMQDV 219
+GA A S T+ + +D+PV V D I L I R+ G + + +
Sbjct: 102 LGAIQKAAASMGDTLSEQQLGDSDIPVIVYRCVDYITQCGLTSEGIYRKCGQTSKTQRLL 161
Query: 220 ESNLQEVVFDHLT--QQH-SKVPHWVKQFL-DLPK-ILRKSLRLTY 342
ES Q+ HL +QH V +K+FL DLP + ++ RLT+
Sbjct: 162 ESLRQDARSVHLKEGEQHVDDVSSALKRFLRDLPDGLFTRAQRLTW 207
>AY553630-1|AAT36325.1| 1450|Homo sapiens ARAP1b protein protein.
Length = 1450
Score = 31.5 bits (68), Expect = 2.9
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Frame = +1
Query: 40 MGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGVILREMQDV 219
+GA A S T+ + +D+PV V D I L I R+ G + + +
Sbjct: 946 LGAIQKAAASMGDTLSEQQLGDSDIPVIVYRCVDYITQCGLTSEGIYRKCGQTSKTQRLL 1005
Query: 220 ESNLQEVVFDHLT--QQH-SKVPHWVKQFL-DLPK-ILRKSLRLTY 342
ES Q+ HL +QH V +K+FL DLP + ++ RLT+
Sbjct: 1006 ESLRQDARSVHLKEGEQHVDDVSSALKRFLRDLPDGLFTRAQRLTW 1051
>AY049732-1|AAL12169.1| 1210|Homo sapiens ARAP1 protein.
Length = 1210
Score = 31.5 bits (68), Expect = 2.9
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Frame = +1
Query: 40 MGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGVILREMQDV 219
+GA A S T+ + +D+PV V D I L I R+ G + + +
Sbjct: 706 LGAIQKAAASMGDTLSEQQLGDSDIPVIVYRCVDYITQCGLTSEGIYRKCGQTSKTQRLL 765
Query: 220 ESNLQEVVFDHLT--QQH-SKVPHWVKQFL-DLPK-ILRKSLRLTY 342
ES Q+ HL +QH V +K+FL DLP + ++ RLT+
Sbjct: 766 ESLRQDARSVHLKEGEQHVDDVSSALKRFLRDLPDGLFTRAQRLTW 811
>AJ621557-1|CAF21317.1| 1450|Homo sapiens ARAP1 protein.
Length = 1450
Score = 31.5 bits (68), Expect = 2.9
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Frame = +1
Query: 40 MGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGVILREMQDV 219
+GA A S T+ + +D+PV V D I L I R+ G + + +
Sbjct: 946 LGAIQKAAASMGDTLSEQQLGDSDIPVIVYRCVDYITQCGLTSEGIYRKCGQTSKTQRLL 1005
Query: 220 ESNLQEVVFDHLT--QQH-SKVPHWVKQFL-DLPK-ILRKSLRLTY 342
ES Q+ HL +QH V +K+FL DLP + ++ RLT+
Sbjct: 1006 ESLRQDARSVHLKEGEQHVDDVSSALKRFLRDLPDGLFTRAQRLTW 1051
>AF411983-1|AAL04167.1| 1136|Homo sapiens centaurin delta2 protein.
Length = 1136
Score = 31.5 bits (68), Expect = 2.9
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Frame = +1
Query: 40 MGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGVILREMQDV 219
+GA A S T+ + +D+PV V D I L I R+ G + + +
Sbjct: 632 LGAIQKAAASMGDTLSEQQLGDSDIPVIVYRCVDYITQCGLTSEGIYRKCGQTSKTQRLL 691
Query: 220 ESNLQEVVFDHLT--QQH-SKVPHWVKQFL-DLPK-ILRKSLRLTY 342
ES Q+ HL +QH V +K+FL DLP + ++ RLT+
Sbjct: 692 ESLRQDARSVHLKEGEQHVDDVSSALKRFLRDLPDGLFTRAQRLTW 737
>AB018325-1|BAA34502.2| 1281|Homo sapiens KIAA0782 protein protein.
Length = 1281
Score = 31.5 bits (68), Expect = 2.9
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Frame = +1
Query: 40 MGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGVILREMQDV 219
+GA A S T+ + +D+PV V D I L I R+ G + + +
Sbjct: 777 LGAIQKAAASMGDTLSEQQLGDSDIPVIVYRCVDYITQCGLTSEGIYRKCGQTSKTQRLL 836
Query: 220 ESNLQEVVFDHLT--QQH-SKVPHWVKQFL-DLPK-ILRKSLRLTY 342
ES Q+ HL +QH V +K+FL DLP + ++ RLT+
Sbjct: 837 ESLRQDARSVHLKEGEQHVDDVSSALKRFLRDLPDGLFTRAQRLTW 882
>AB209473-1|BAD92710.1| 1474|Homo sapiens centaurin delta 2 isoform a
variant protein.
Length = 1474
Score = 31.1 bits (67), Expect = 3.8
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Frame = +1
Query: 40 MGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGVILREMQDV 219
+GA A S T+ + +D+PV V D I L I R+ G + + +
Sbjct: 981 LGAIQKAAASMGDTLSEQQLGDSDIPVIVYRCVDYITQCGLTSEGIYRKCGQTSKTQRLL 1040
Query: 220 ESNLQEVVFDHLT--QQH-SKVPHWVKQFL-DLPK-ILRKSLRLTY 342
ES Q+ HL +QH V +K+FL DLP + ++ RLT+
Sbjct: 1041 ESLRQDARSVHLKEGEQHVDDVSSALKRFLRDLPDGLFTRAERLTW 1086
>AF092564-1|AAC72361.1| 1202|Homo sapiens chromosome-associated
protein-C protein.
Length = 1202
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/69 (27%), Positives = 40/69 (57%), Gaps = 16/69 (23%)
Frame = +1
Query: 136 ADIIQNSSLAE---PEIERERGVILREMQDVESN---LQ----------EVVFDHLTQQH 267
A++++N++ AE PEI++E +L+E++ ++ N LQ E + H+ + +
Sbjct: 884 AEVVKNTNAAEESLPEIQKEHRNLLQELKVIQENEHALQKDALSIKLKLEQIDGHIAEHN 943
Query: 268 SKVPHWVKQ 294
SK+ +W K+
Sbjct: 944 SKIKYWHKE 952
>AB019987-1|BAA73535.1| 1288|Homo sapiens chromosome-associated
polypeptide-C protein.
Length = 1288
Score = 30.3 bits (65), Expect = 6.6
Identities = 19/69 (27%), Positives = 40/69 (57%), Gaps = 16/69 (23%)
Frame = +1
Query: 136 ADIIQNSSLAE---PEIERERGVILREMQDVESN---LQ----------EVVFDHLTQQH 267
A++++N++ AE PEI++E +L+E++ ++ N LQ E + H+ + +
Sbjct: 970 AEVVKNTNAAEESLPEIQKEHRNLLQELKVIQENEHALQKDALSIKLKLEQIDGHIAEHN 1029
Query: 268 SKVPHWVKQ 294
SK+ +W K+
Sbjct: 1030 SKIKYWHKE 1038
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,223,894
Number of Sequences: 237096
Number of extensions: 1910096
Number of successful extensions: 7627
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 7449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7613
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -