Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021247
(681 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68270-1|CAA92566.2| 458|Caenorhabditis elegans Hypothetical pr... 109 2e-24
U13644-8|AAB52679.1| 471|Caenorhabditis elegans Hypothetical pr... 64 1e-10
AY008141-1|AAG32094.1| 375|Caenorhabditis elegans heterotrimeri... 31 0.76
AF039715-1|AAB96733.2| 375|Caenorhabditis elegans G protein, su... 31 0.76
AB003487-1|BAA22402.1| 375|Caenorhabditis elegans G protein alp... 31 0.76
AB003486-1|BAA22401.1| 375|Caenorhabditis elegans G protein a(s... 31 0.76
Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z74030-3|CAA98437.2| 395|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z68342-9|CAD91630.2| 626|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF016441-3|AAB65909.2| 744|Caenorhabditis elegans Hypothetical ... 29 2.3
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 2.3
AL117204-4|CAB55144.1| 281|Caenorhabditis elegans Hypothetical ... 29 4.1
AL117204-9|CAB55124.1| 358|Caenorhabditis elegans Hypothetical ... 28 5.4
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 27 9.4
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 27 9.4
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 27 9.4
>Z68270-1|CAA92566.2| 458|Caenorhabditis elegans Hypothetical
protein ZC410.2 protein.
Length = 458
Score = 109 bits (262), Expect = 2e-24
Identities = 52/85 (61%), Positives = 66/85 (77%)
Frame = +1
Query: 1 KRSQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIE 180
+R++ LEL VEN+GAHLNAYTSRE T +YAKC + +V+IL+DI+ NSSLA +IE
Sbjct: 85 RRTRMGLELEVENIGAHLNAYTSRESTTYYAKCFTEKLDQSVDILSDILLNSSLATKDIE 144
Query: 181 RERGVILREMQDVESNLQEVVFDHL 255
ERGVI+REM++V N QEVVFD L
Sbjct: 145 AERGVIIREMEEVAQNFQEVVFDIL 169
Score = 89.8 bits (213), Expect = 2e-18
Identities = 40/85 (47%), Positives = 54/85 (63%)
Frame = +3
Query: 255 HATAFQGTPLGQTILGPTKNIKKISKADLQSYIRNHYQPGRIVLSGAGGVEHERLVDLAS 434
HA F+G PL TILGP + I+ I+K DLQ YI HY+ GR+VL+ AGGV H+ +V +A
Sbjct: 170 HADVFKGNPLSYTILGPIELIQTINKNDLQGYINTHYRSGRMVLAAAGGVNHDAIVKMAE 229
Query: 435 KHFSGLKNSACDVELTPCRYTGSEI 509
K+F LK+ E P Y+ E+
Sbjct: 230 KYFGELKHGDSSTEFVPATYSPCEV 254
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = +2
Query: 512 VRDD--SMPLAHVAIAVEGAGWTDADNIPLMVANTLI 616
VR D +P+ + A+ VEG WT DN+ LMVANTL+
Sbjct: 254 VRGDIPDLPMLYGAMVVEGVSWTHEDNLALMVANTLM 290
>U13644-8|AAB52679.1| 471|Caenorhabditis elegans Hypothetical
protein F56D2.1 protein.
Length = 471
Score = 63.7 bits (148), Expect = 1e-10
Identities = 33/85 (38%), Positives = 52/85 (61%)
Frame = +1
Query: 1 KRSQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIE 180
KR+ LE + +GA LN++T R+QT + + A DV V+ILAD+++NS L I+
Sbjct: 93 KRASAALESELNAIGAKLNSFTERDQTAVFVQAGAQDVEKVVDILADVLRNSKLEASTID 152
Query: 181 RERGVILREMQDVESNLQEVVFDHL 255
ER +L+E++ + Q V+FD L
Sbjct: 153 TERVNLLKELEASDDYHQLVLFDML 177
Score = 60.9 bits (141), Expect = 8e-10
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = +3
Query: 255 HATAFQGTPLGQTILGPTKNIKKISKADLQSYIRNHYQPGRIVLSGAGGVEHERLVDLAS 434
HA FQGTPL ++LG +++I IS L+ + +HY+P R+VLS GG + LA
Sbjct: 178 HAAGFQGTPLALSVLGTSESIPNISAQQLKEWQEDHYRPVRMVLSAVGG-GVSNVSSLAD 236
Query: 435 KHFSGLKNS--ACDVELTPCRYTGSE 506
K+F L N ++ R+TGSE
Sbjct: 237 KYFGDLSNEYPRKVPQVDGTRFTGSE 262
Score = 35.1 bits (77), Expect = 0.047
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 509 RVRDDSMPLAHVAIAVEGAGWTDADNIPLMVANTLI 616
R R+D++P + A AVEG G+ D + L +AN I
Sbjct: 264 RYRNDNVPHMYAAFAVEGVGYAHKDALALQIANQFI 299
>AY008141-1|AAG32094.1| 375|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 375
Score = 31.1 bits (67), Expect = 0.76
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +1
Query: 49 HLNAYTS---REQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGVILREMQDV 219
H+N + RE+ + + + + V + + +I+ SL +P R ILR D
Sbjct: 60 HINGFNEAEKREKITDIRRNVRDAMQVILRAMDEIVPKVSLDDPSTAISRDYILRITNDP 119
Query: 220 ESNLQEVVFDHL 255
E N +DH+
Sbjct: 120 EDNYPSEFYDHI 131
>AF039715-1|AAB96733.2| 375|Caenorhabditis elegans G protein,
subunit alpha protein 1 protein.
Length = 375
Score = 31.1 bits (67), Expect = 0.76
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +1
Query: 49 HLNAYTS---REQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGVILREMQDV 219
H+N + RE+ + + + + V + + +I+ SL +P R ILR D
Sbjct: 60 HINGFNEAEKREKITDIRRNVRDAMQVILRAMDEIVPKVSLDDPSTAISRDYILRITNDP 119
Query: 220 ESNLQEVVFDHL 255
E N +DH+
Sbjct: 120 EDNYPSEFYDHI 131
>AB003487-1|BAA22402.1| 375|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 375
Score = 31.1 bits (67), Expect = 0.76
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +1
Query: 49 HLNAYTS---REQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGVILREMQDV 219
H+N + RE+ + + + + V + + +I+ SL +P R ILR D
Sbjct: 60 HINGFNEAEKREKITDIRRNVRDAMQVILRAMDEIVPKVSLDDPSTAISRDYILRITNDP 119
Query: 220 ESNLQEVVFDHL 255
E N +DH+
Sbjct: 120 EDNYPSEFYDHI 131
>AB003486-1|BAA22401.1| 375|Caenorhabditis elegans G protein a(s)
subunit protein.
Length = 375
Score = 31.1 bits (67), Expect = 0.76
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +1
Query: 49 HLNAYTS---REQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGVILREMQDV 219
H+N + RE+ + + + + V + + +I+ SL +P R ILR D
Sbjct: 60 HINGFNEAEKREKITDIRRNVRDAMQVILRAMDEIVPKVSLDDPSTAISRDYILRITNDP 119
Query: 220 ESNLQEVVFDHL 255
E N +DH+
Sbjct: 120 EDNYPSEFYDHI 131
>Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical
protein T02E1.3b protein.
Length = 679
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 68 PGNKQFFTQNASLMTSP*Q*RSLLISY-RIPPSPNPKSNENAVSFFAKCKMSKVTFRRLC 244
P N F QN+S+ SP Q R + +S +PP + + ++A+S +K + + ++
Sbjct: 141 PSNTAFKEQNSSMPLSPAQERWISMSIGAVPPPTSSAAEKDAISSLSKNGVEQEQEKKHE 200
Query: 245 LITSRNSIPRYPIGSNNSWTY 307
+ + + I Y S N + Y
Sbjct: 201 ICSRDDDIDDYGFLSPNPFPY 221
>Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical
protein T02E1.3a protein.
Length = 646
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 68 PGNKQFFTQNASLMTSP*Q*RSLLISY-RIPPSPNPKSNENAVSFFAKCKMSKVTFRRLC 244
P N F QN+S+ SP Q R + +S +PP + + ++A+S +K + + ++
Sbjct: 108 PSNTAFKEQNSSMPLSPAQERWISMSIGAVPPPTSSAAEKDAISSLSKNGVEQEQEKKHE 167
Query: 245 LITSRNSIPRYPIGSNNSWTY 307
+ + + I Y S N + Y
Sbjct: 168 ICSRDDDIDDYGFLSPNPFPY 188
>Z74030-3|CAA98437.2| 395|Caenorhabditis elegans Hypothetical
protein D1054.5 protein.
Length = 395
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/51 (25%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 145 IQNSSLAEPEI-ERERGVILREMQDVESNLQEVVFDHLTQQHSKVPHWVKQ 294
+Q S+ +P++ + + R +D+ES +Q+ V +QQ ++ W++Q
Sbjct: 263 VQTVSVEDPDLKDMSLEEMRRHAEDIESYIQDQVKQQWSQQKNETEKWIEQ 313
>Z68342-9|CAD91630.2| 626|Caenorhabditis elegans Hypothetical
protein F38E11.12 protein.
Length = 626
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Frame = +1
Query: 175 IERERGVI------LREMQDVESNLQEVVFDHLTQQHSKVPHWVKQFLDLPKILRKSL 330
++R+RG + L E +D+ESNL+ + D L + H K+ ++F D ++ L
Sbjct: 551 LQRQRGELDDKKRCLSENEDIESNLKRLAIDTL-ELHDKMTEMEEEFWDFSATAKRKL 607
>AF016441-3|AAB65909.2| 744|Caenorhabditis elegans Hypothetical
protein M03F8.3 protein.
Length = 744
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 166 EPEIERERGVILREMQDVESNLQEVVFDHLTQQHSK 273
+ E ER RG+ + ++ SN E +F H TQ K
Sbjct: 271 QKEHERARGIFKYGLDNLPSNRTEEIFKHYTQHEKK 306
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +1
Query: 187 RGVILREMQDVESNLQEVVFDHLTQ--QHSKVPHWVKQFL 300
+G+ +EM+D+ L+E++FD + H K W +QF+
Sbjct: 491 KGIDRKEMKDLVDQLEEMLFDKCDRNISHPKYRVWKQQFI 530
>AL117204-4|CAB55144.1| 281|Caenorhabditis elegans Hypothetical
protein Y116A8C.11 protein.
Length = 281
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +1
Query: 172 EIERERGVILREMQDVESNL---QEVVFDHLTQQHSKVPHWVKQFLDLPKILRKSLRL 336
E+ER+ G + ++QD ES+ QE++ L Q K+ KQ +DL L ++ L
Sbjct: 182 ELERQVGKLTAQLQDFESSRGYEQELILSQLEVQKRKLD---KQLIDLQSKLERNPEL 236
>AL117204-9|CAB55124.1| 358|Caenorhabditis elegans Hypothetical
protein Y116A8C.18 protein.
Length = 358
Score = 28.3 bits (60), Expect = 5.4
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = +1
Query: 172 EIERERGVILREMQDVESNL---QEVVFDHLTQQHSKVPHWVKQFLDLPKILRKSLRLTY 342
E+ER+ G + ++QD ES+ QE++ L Q K KQ DL L ++L L
Sbjct: 148 ELERQVGKLTAQLQDFESSRGYEQELILSLLEFQKRKSD---KQLKDLQSKLERNLELVE 204
Query: 343 RATLGTTINLDVLFCLELVE 402
L + + L E+ E
Sbjct: 205 LNKLHEEVQSERLLKSEVAE 224
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = +1
Query: 106 NDVPVAVEILADIIQNSSLAEPEIERERGVILREMQDVESNLQEVVFDHLTQQ 264
ND A+ D +Q S + +IE+E+GV+ +E+ D+ + + + + Q+
Sbjct: 1204 NDQISALTNTLDALQKS---KAKIEKEKGVLQKELDDINAQVDQETKSRVEQE 1253
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
R06C7.10 protein.
Length = 1938
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = +1
Query: 106 NDVPVAVEILADIIQNSSLAEPEIERERGVILREMQDVESNLQEVVFDHLTQQ 264
ND A+ D +Q S + +IE+E+GV+ +E+ D+ + + + + Q+
Sbjct: 1204 NDQISALTNTLDALQKS---KAKIEKEKGVLQKELDDINAQVDQETKSRVEQE 1253
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = +1
Query: 106 NDVPVAVEILADIIQNSSLAEPEIERERGVILREMQDVESNLQEVVFDHLTQQ 264
ND A+ D +Q S + +IE+E+GV+ +E+ D+ + + + + Q+
Sbjct: 1204 NDQISALTNTLDALQKS---KAKIEKEKGVLQKELDDINAQVDQETKSRVEQE 1253
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,789,714
Number of Sequences: 27780
Number of extensions: 296834
Number of successful extensions: 894
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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