Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021246
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    24   1.2  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    23   2.9  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   5.0  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   6.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.7  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   6.7  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   6.7  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = -3

Query: 427 HRERLFEMHLPKQFCT-PSTLXTCVISTQLRKSTITD 320
           HRE  F +   K FCT  + L  C ++       +TD
Sbjct: 30  HRESYFRLSKAKSFCTFVAALVYCSVTFFALSELLTD 66


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 6/34 (17%)
 Frame = -3

Query: 403 HLPKQFCTPSTLXTCV------ISTQLRKSTITD 320
           HL  QFC  + + TCV      IS +  +ST+ D
Sbjct: 8   HLCAQFCLLAAIFTCVKPQLTRISDEAIESTLND 41


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 595 FVVPSEFVNQLTFWLLRI 542
           F+VPS  V ++ +WL +I
Sbjct: 96  FIVPSGVVYKIGYWLHQI 113


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -2

Query: 557 LAPKNRASRSSCLRGST 507
           L   N ASRSSCL  +T
Sbjct: 228 LESPNPASRSSCLGSNT 244


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 588 TTNYCQHGATATQSGLQYE 644
           +TN C++ AT  Q+  QY+
Sbjct: 104 STNPCENQATCVQNKNQYQ 122


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -2

Query: 557 LAPKNRASRSSCLRGST 507
           L   N ASRSSCL  +T
Sbjct: 17  LESPNPASRSSCLGSNT 33


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -2

Query: 557 LAPKNRASRSSCLRGST 507
           L   N ASRSSCL  +T
Sbjct: 17  LESPNPASRSSCLGSNT 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,650
Number of Sequences: 336
Number of extensions: 2481
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)