Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021246
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125951-5|AAL27238.1|  345|Caenorhabditis elegans Hypothetical ...    28   6.6  
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z66522-6|CAH04737.1| 1147|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z66522-5|CAA91405.1| 1149|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ...    27   8.7  

>AF125951-5|AAL27238.1|  345|Caenorhabditis elegans Hypothetical
           protein D2063.3a protein.
          Length = 345

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 487 DGALPGGVDPRKQELLEARFL 549
           DG L GG+D  K+ELL+  FL
Sbjct: 316 DGELVGGLDVVKEELLDTHFL 336


>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical
           protein Y16B4A.2 protein.
          Length = 2105

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 16/54 (29%), Positives = 23/54 (42%)
 Frame = -1

Query: 495 CSILTPAPLHRELRRPRSLGRSLIANASLKCIFQNNFVLHPHXLRVSSARNYEN 334
           C +L  APL      P +  ++ + N     IFQ NF  +   L     +NY N
Sbjct: 10  CLLLLLAPLRNGQTTPTTRAQADLVNQLPGTIFQVNFKQYAGYLNSDPNKNYNN 63


>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical
           protein Y16B4A.2 protein.
          Length = 2105

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 16/54 (29%), Positives = 23/54 (42%)
 Frame = -1

Query: 495 CSILTPAPLHRELRRPRSLGRSLIANASLKCIFQNNFVLHPHXLRVSSARNYEN 334
           C +L  APL      P +  ++ + N     IFQ NF  +   L     +NY N
Sbjct: 10  CLLLLLAPLRNGQTTPTTRAQADLVNQLPGTIFQVNFKQYAGYLNSDPNKNYNN 63


>Z66522-6|CAH04737.1| 1147|Caenorhabditis elegans Hypothetical
           protein F14E5.2b protein.
          Length = 1147

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -1

Query: 501 WKCSILTPAPLHRELRRPRSLGRSL 427
           +KC++LTP P H+ +R   + G +L
Sbjct: 172 FKCNVLTPDPAHKGVRVAHTQGMAL 196


>Z66522-5|CAA91405.1| 1149|Caenorhabditis elegans Hypothetical
           protein F14E5.2a protein.
          Length = 1149

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -1

Query: 501 WKCSILTPAPLHRELRRPRSLGRSL 427
           +KC++LTP P H+ +R   + G +L
Sbjct: 172 FKCNVLTPDPAHKGVRVAHTQGMAL 196


>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
           protein Y16B4A.2 protein.
          Length = 2105

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 16/54 (29%), Positives = 23/54 (42%)
 Frame = -1

Query: 495 CSILTPAPLHRELRRPRSLGRSLIANASLKCIFQNNFVLHPHXLRVSSARNYEN 334
           C +L  APL      P +  ++ + N     IFQ NF  +   L     +NY N
Sbjct: 10  CLLLLLAPLRNGQTTPTTRAQADLVNQLPGTIFQVNFKQYAGYLNSDPNKNYNN 63


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,330,872
Number of Sequences: 27780
Number of extensions: 249997
Number of successful extensions: 592
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)