Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021245
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.8  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   3.1  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      23   3.1  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      23   3.1  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.1  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.1  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.1  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.1  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    22   4.1  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   4.1  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   4.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.1  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   9.4  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +3

Query: 510  TWIYVSATDFLIIISLPLVYQVAKLESRCDPSKYYV*Y*RSNEINVYI 653
            T++ +++   ++I  L L   +  L+   DP   +  +   NEI VYI
Sbjct: 1228 TFLMLNSLYVIVIFLLTLKKDLLHLDWPFDPKVNFTYFEDKNEIGVYI 1275


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +3

Query: 510  TWIYVSATDFLIIISLPLVYQVAKLESRCDPSKYYV*Y*RSNEINVYI 653
            T++ +++   ++I  L L   +  L+   DP   +  +   NEI VYI
Sbjct: 1228 TFLMLNSLYVIVIFLLTLKKDLLHLDWPFDPKVNFTYFEDKNEIGVYI 1275


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 310 IVIWVLDKSMQVQNLKENGLVIL 378
           I IW      QV+NL +NG  ++
Sbjct: 443 IQIWTTGSDPQVRNLLDNGYRVI 465


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 668 NPFFFNVDIYFVRTLISYIVFRRITSRF 585
           N +  + D YF+R +I  I    IT++F
Sbjct: 367 NFYLIHTDTYFLRDIIFAIRQHAITAKF 394


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 668 NPFFFNVDIYFVRTLISYIVFRRITSRF 585
           N +  + D YF+R +I  I    IT++F
Sbjct: 369 NFYLIHTDTYFLRDIIFAIRQHAITAKF 396


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -1

Query: 607 FEGSHLDSSFATWYTNGSEI 548
           F+  H D  F +W  +G+++
Sbjct: 137 FDDQHCDMKFGSWTYDGNQL 156


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -1

Query: 607 FEGSHLDSSFATWYTNGSEI 548
           F+  H D  F +W  +G+++
Sbjct: 137 FDDQHCDMKFGSWTYDGNQL 156


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -1

Query: 607 FEGSHLDSSFATWYTNGSEI 548
           F+  H D  F +W  +G+++
Sbjct: 137 FDDQHCDMKFGSWTYDGNQL 156


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -1

Query: 607 FEGSHLDSSFATWYTNGSEI 548
           F+  H D  F +W  +G+++
Sbjct: 137 FDDQHCDMKFGSWTYDGNQL 156


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -1

Query: 607 FEGSHLDSSFATWYTNGSEI 548
           F+  H D  F +W  +G+++
Sbjct: 137 FDDQHCDMKFGSWTYDGNQL 156


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 668 NPFFFNVDIYFVRTLISYIVFRRITSRF 585
           N +  + D YF+R +I  I    +T++F
Sbjct: 367 NFYLIHTDTYFLRDIIFAIRQHAVTAKF 394


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 668 NPFFFNVDIYFVRTLISYIVFRRITSRF 585
           N +  + D YF+R +I  I    +T++F
Sbjct: 369 NFYLIHTDTYFLRDIIFAIRQHAVTAKF 396


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
 Frame = +1

Query: 202 CNFVLLF--KCFVIIVE*KSL 258
           CNF++LF    FVI+V   SL
Sbjct: 322 CNFIILFYLSVFVILVYYASL 342


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 6/22 (27%), Positives = 10/22 (45%)
 Frame = +2

Query: 458 CVIIYMWTKSGHNLDSTYLDLC 523
           C + Y W+   H   +   D+C
Sbjct: 147 CYVTYAWSPIDHTESNIINDMC 168


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,452
Number of Sequences: 336
Number of extensions: 3771
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)