Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021244
(708 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0633 - 4735298-4735485,4736083-4736114,4736203-4736297,473... 76 3e-14
03_06_0327 - 33158131-33158315,33158586-33158639,33159149-331591... 69 5e-12
03_06_0243 + 32598782-32598793,32599037-32599123,32601052-326012... 67 1e-11
03_05_0705 - 26965352-26965542,26965732-26965763,26966141-269662... 65 6e-11
06_03_0650 + 23157130-23157582,23157687-23157898,23157982-231581... 60 2e-09
02_05_0272 - 27348537-27348728,27349035-27349192,27349292-273493... 58 7e-09
03_05_0704 - 26953474-26953643,26953770-26953801,26953915-269540... 57 1e-08
02_01_0519 - 3748415-3748432,3749010-3749041,3749474-3749606,374... 57 2e-08
06_03_1494 + 30554997-30555608,30555707-30555915,30556006-305561... 56 2e-08
02_04_0617 - 24422922-24422927,24423063-24423134,24423223-244233... 56 3e-08
04_04_0824 - 28399144-28399385,28400193-28400312,28400422-284004... 56 4e-08
01_01_1197 - 9630506-9630681,9630774-9630805,9630894-9630988,963... 56 4e-08
04_01_0263 - 3532481-3532656,3532710-3532719,3532754-3532785,353... 54 8e-08
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 54 1e-07
03_04_0231 + 19050105-19050567,19051376-19052648,19052743-19054171 48 1e-05
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 38 0.008
02_04_0615 - 24410124-24410290,24410592-24410623,24410717-244108... 34 0.096
12_02_0414 + 18824347-18825161,18826018-18828229 29 3.6
03_03_0279 - 16134422-16134608,16134703-16134947,16135046-161353... 29 4.8
01_06_1795 - 39925019-39926029,39926265-39926408,39927200-399272... 28 6.3
>07_01_0633 -
4735298-4735485,4736083-4736114,4736203-4736297,
4736414-4736487,4736682-4736817,4736902-4736965,
4737101-4737166,4737265-4737446,4737824-4737948,
4738031-4738169,4738250-4738369,4738675-4738746,
4738900-4738935,4739633-4739749,4739821-4739953,
4740053-4740156,4740243-4740370,4740880-4741010,
4741561-4741757,4743906-4744583
Length = 938
Score = 75.8 bits (178), Expect = 3e-14
Identities = 34/82 (41%), Positives = 51/82 (62%)
Frame = +1
Query: 10 TVYEYFMKEKKYRIKYPDLNCLWVGPKDKNIYLPMELVEVAYGQARNKQLNDRQLSTMVR 189
TV +YF + KYR++Y CL G IYLPME+ + GQ +K+LND+Q++ ++R
Sbjct: 422 TVIQYFSQRYKYRLQYTSWPCLQSGNPSNPIYLPMEVCTIVEGQRYSKKLNDKQVTGLLR 481
Query: 190 EAATPPDVRKRKIEEVIQKMNY 255
PP R++KI E++Q NY
Sbjct: 482 ATCQPPQKREQKIIEMVQHNNY 503
Score = 32.7 bits (71), Expect = 0.29
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +2
Query: 578 SMLHALEKQVNFLVVVVSGRGRDYYHKLKQIAELKVGILTQCI 706
S +H Q+ L+V++ YY ++K++ E ++GI++QC+
Sbjct: 595 SNIHTRAPQLQLLIVILPDVN-GYYGRIKRVCETELGIVSQCL 636
>03_06_0327 -
33158131-33158315,33158586-33158639,33159149-33159180,
33159275-33159369,33159466-33159539,33159643-33159778,
33159874-33159937,33160017-33160079,33160160-33160299,
33160487-33160627,33160747-33160868,33160947-33161112,
33161194-33161313,33161580-33161651,33161787-33161843,
33162036-33162152,33162231-33162369,33162794-33162900,
33162972-33163081,33163172-33163305,33163397-33163546,
33163635-33163840,33166123-33166818
Length = 1059
Score = 68.5 bits (160), Expect = 5e-12
Identities = 30/84 (35%), Positives = 48/84 (57%)
Frame = +1
Query: 4 RMTVYEYFMKEKKYRIKYPDLNCLWVGPKDKNIYLPMELVEVAYGQARNKQLNDRQLSTM 183
R TV +YF YR+KY CL G + +YLPME+ ++ GQ +K+LND+Q++ +
Sbjct: 477 RKTVVQYFWDRYNYRLKYASWPCLQSGSDSRPVYLPMEVCKIVEGQRYSKKLNDKQVTNI 536
Query: 184 VREAATPPDVRKRKIEEVIQKMNY 255
+R P R++ I E++ Y
Sbjct: 537 LRATCQRPQQREQSIHEMVLHNKY 560
>03_06_0243 +
32598782-32598793,32599037-32599123,32601052-32601257,
32601342-32601453,32601628-32601724,32601815-32601924,
32601996-32602153,32602559-32602697,32602776-32602892,
32603084-32603140,32603280-32603351,32603617-32603736,
32603818-32603983,32604067-32604188,32604373-32604447,
32604636-32604775,32604860-32604922,32605002-32605065,
32605161-32605296,32605401-32605474,32605570-32605664,
32605761-32605792,32606344-32606474,32606595-32606827,
32606916-32607723,32607815-32607967
Length = 1192
Score = 67.3 bits (157), Expect = 1e-11
Identities = 29/84 (34%), Positives = 49/84 (58%)
Frame = +1
Query: 4 RMTVYEYFMKEKKYRIKYPDLNCLWVGPKDKNIYLPMELVEVAYGQARNKQLNDRQLSTM 183
R TV +YF YR+KY CL G + +YLPME+ ++ GQ +K+LN++Q++ +
Sbjct: 270 RKTVVQYFWDRYNYRLKYASWPCLQSGSDSRPVYLPMEVCKIVEGQRYSKKLNNKQVTNI 329
Query: 184 VREAATPPDVRKRKIEEVIQKMNY 255
+R P R+++I E++ Y
Sbjct: 330 LRATCQRPQQREQRIHEMVLHNKY 353
>03_05_0705 -
26965352-26965542,26965732-26965763,26966141-26966235,
26966737-26966810,26966894-26967029,26967137-26967200,
26967285-26967350,26967445-26967587,26969314-26969407,
26969779-26969902,26970016-26970193,26970273-26970395,
26970884-26970955,26971032-26971139,26972511-26972627,
26972757-26972889,26973209-26973299,26974642-26974722,
26975342-26975421,26975500-26975705,26977417-26977893
Length = 894
Score = 64.9 bits (151), Expect = 6e-11
Identities = 29/84 (34%), Positives = 50/84 (59%)
Frame = +1
Query: 4 RMTVYEYFMKEKKYRIKYPDLNCLWVGPKDKNIYLPMELVEVAYGQARNKQLNDRQLSTM 183
R++V +YF ++ Y +KY + CL G + YLPME+ + GQ +++LN+ Q++ M
Sbjct: 319 RVSVVQYFNRQYSYSLKYINWPCLQAGSDSRPTYLPMEVCRIVKGQRYSRKLNECQVTRM 378
Query: 184 VREAATPPDVRKRKIEEVIQKMNY 255
+R A P+ R+ I E+ + NY
Sbjct: 379 LRLARETPEERENSILEIANENNY 402
>06_03_0650 +
23157130-23157582,23157687-23157898,23157982-23158128,
23158214-23158347,23158442-23158551,23158711-23158817,
23159045-23159183,23159286-23159402,23159737-23159844,
23159927-23159998,23160108-23160230,23160336-23160495,
23160585-23160706,23160825-23160962,23161042-23161184,
23161305-23161367,23161567-23161630,23161709-23161844,
23162123-23162196,23162764-23162858,23162951-23162982,
23163104-23163276
Length = 973
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/84 (32%), Positives = 50/84 (59%)
Frame = +1
Query: 10 TVYEYFMKEKKYRIKYPDLNCLWVGPKDKNIYLPMELVEVAYGQARNKQLNDRQLSTMVR 189
+V EYF + + I++P L CL VG + K YLPME ++ GQ K+LN++Q++++++
Sbjct: 399 SVVEYFKEMYGFTIQHPHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITSLLK 458
Query: 190 EAATPPDVRKRKIEEVIQKMNYRR 261
P ++ I + +Q+ Y +
Sbjct: 459 VTCRRPREQEMDILQTVQQNGYEQ 482
>02_05_0272 -
27348537-27348728,27349035-27349192,27349292-27349323,
27349420-27349514,27349614-27349687,27349800-27349878,
27350015-27350078,27350156-27350218,27350300-27350442,
27350566-27350703,27350792-27350913,27350993-27351158,
27351276-27351398,27351609-27351680,27351773-27351880,
27352481-27352597,27352727-27352865,27352974-27353080,
27353167-27353276,27353892-27354025,27354106-27354255,
27354329-27354549,27354647-27355318
Length = 1092
Score = 58.0 bits (134), Expect = 7e-09
Identities = 26/84 (30%), Positives = 48/84 (57%)
Frame = +1
Query: 10 TVYEYFMKEKKYRIKYPDLNCLWVGPKDKNIYLPMELVEVAYGQARNKQLNDRQLSTMVR 189
TV +YF + + IK+ L CL VG + + YLPME+ ++ GQ +K+LN++Q++ +++
Sbjct: 476 TVVQYFQETYGFNIKHTTLPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNEKQITALLK 535
Query: 190 EAATPPDVRKRKIEEVIQKMNYRR 261
P R+ I + + Y +
Sbjct: 536 VTCQRPQERELDILQTVHHNAYHQ 559
>03_05_0704 -
26953474-26953643,26953770-26953801,26953915-26954009,
26954107-26954180,26954283-26954412,26954522-26954585,
26954660-26954722,26954795-26954937,26955386-26955523,
26955610-26955731,26955805-26955976,26956559-26956630,
26956753-26956887,26956987-26957103,26957184-26957316,
26957455-26957561,26958060-26958077,26958235-26958379,
26958472-26958671,26960744-26961421
Length = 935
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/78 (33%), Positives = 45/78 (57%)
Frame = +1
Query: 4 RMTVYEYFMKEKKYRIKYPDLNCLWVGPKDKNIYLPMELVEVAYGQARNKQLNDRQLSTM 183
R++V +YF K+ Y +K+ + CL G + YLPME+ + GQ +K+LN+ Q++ +
Sbjct: 390 RISVVQYFKKQYNYSLKHVNWPCLQAGSDSRPKYLPMEVCSILEGQRYSKKLNEHQVTNI 449
Query: 184 VREAATPPDVRKRKIEEV 237
+R P R+ I E+
Sbjct: 450 LRMTCERPAQRESSIIEI 467
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +2
Query: 599 KQVNFLVVVVSGRGRDYYHKLKQIAELKVGILTQC 703
+Q+ L+V+++ Y ++K+I E +VG++TQC
Sbjct: 576 QQLQLLIVILTEISGSY-GRIKRICETEVGVITQC 609
>02_01_0519 -
3748415-3748432,3749010-3749041,3749474-3749606,
3749702-3749765,3749948-3750010,3750101-3750243,
3750358-3750495,3750570-3750691,3750798-3750963,
3751058-3751180,3751325-3751396,3751484-3751591,
3752730-3752846,3752953-3753040,3753162-3753253,
3753378-3753490,3753994-3754127,3754209-3754564,
3754649-3754861
Length = 764
Score = 56.8 bits (131), Expect = 2e-08
Identities = 27/99 (27%), Positives = 50/99 (50%)
Frame = +1
Query: 43 YRIKYPDLNCLWVGPKDKNIYLPMELVEVAYGQARNKQLNDRQLSTMVREAATPPDVRKR 222
+ I+YP L CL V + I+LP+E+ ++A GQ KQLN + ++ +++ A PP+ R
Sbjct: 308 FSIQYPSLPCLKVAHFGETIFLPLEVCKIAEGQCHQKQLNAKHMAALLQVARQPPNERDY 367
Query: 223 KIEEVIQKMNYRRINSLKHTAWR*PMSFIKLKRKFSKRP 339
I + + + Y+ K + + +K + P
Sbjct: 368 NILQTVHQNKYQEDPHAKEFGIKIEEKLVSIKSRILPAP 406
>06_03_1494 +
30554997-30555608,30555707-30555915,30556006-30556155,
30556254-30556312,30556852-30556961,30557216-30557322,
30557443-30557581,30557705-30557821,30557918-30558025,
30558221-30558292,30558783-30558948,30559044-30559165,
30559245-30559382,30559462-30559604,30559699-30559761,
30560107-30560170,30560238-30560373,30560478-30560551,
30560640-30560734,30560829-30560860,30560973-30561175
Length = 972
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/82 (31%), Positives = 47/82 (57%)
Frame = +1
Query: 10 TVYEYFMKEKKYRIKYPDLNCLWVGPKDKNIYLPMELVEVAYGQARNKQLNDRQLSTMVR 189
+V +YF + + I++ L CL VG + + YLPME+ ++ GQ +K+LN Q+ ++
Sbjct: 427 SVVQYFQETYGFAIQHTYLPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNQNQIRALLE 486
Query: 190 EAATPPDVRKRKIEEVIQKMNY 255
E P R+R I +++ +Y
Sbjct: 487 ETCQRPHDRERDIIQMVNHNSY 508
>02_04_0617 -
24422922-24422927,24423063-24423134,24423223-24423324,
24423443-24423559,24423626-24423764,24423857-24423963,
24424052-24424161,24425749-24425882,24426005-24426145,
24426241-24426440,24426781-24426941,24427753-24427897
Length = 477
Score = 56.0 bits (129), Expect = 3e-08
Identities = 29/84 (34%), Positives = 46/84 (54%)
Frame = +1
Query: 10 TVYEYFMKEKKYRIKYPDLNCLWVGPKDKNIYLPMELVEVAYGQARNKQLNDRQLSTMVR 189
TV +YF K KY++KY CL G ++I+LPME+ ++ GQ ++L RQ + +++
Sbjct: 345 TVVDYFQKRYKYKLKYIYWPCLQCG-SSRDIFLPMEVCKILPGQRYCRKLTTRQAAKLLK 403
Query: 190 EAATPPDVRKRKIEEVIQKMNYRR 261
P +RK I +V N R
Sbjct: 404 ATCERPHIRKIAIMKVRNNCNVER 427
>04_04_0824 -
28399144-28399385,28400193-28400312,28400422-28400453,
28400531-28400625,28400713-28400786,28400883-28401018,
28401096-28401333,28401508-28401555,28401593-28401780,
28401862-28401983,28402061-28402226,28402321-28402443,
28403068-28403139,28403244-28403351,28404212-28404328,
28404458-28404596,28404702-28404808,28404904-28405013,
28405141-28405274,28405348-28405497,28405571-28405791,
28405868-28406677,28410261-28410473
Length = 1254
Score = 55.6 bits (128), Expect = 4e-08
Identities = 25/82 (30%), Positives = 47/82 (57%)
Frame = +1
Query: 10 TVYEYFMKEKKYRIKYPDLNCLWVGPKDKNIYLPMELVEVAYGQARNKQLNDRQLSTMVR 189
TV +YF++ + I++ L CL VG + + YLPME+ ++ GQ +K+LN++Q++ +++
Sbjct: 593 TVVQYFLETYGFSIQHTTLPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNEKQITALLK 652
Query: 190 EAATPPDVRKRKIEEVIQKMNY 255
P R+ I + Y
Sbjct: 653 VTCQRPQERELDILRTVSHNAY 674
>01_01_1197 -
9630506-9630681,9630774-9630805,9630894-9630988,
9631569-9631642,9631732-9631843,9631967-9632030,
9632210-9632275,9632396-9632526,9632884-9633021,
9633115-9633227,9633306-9633471,9633588-9633701,
9633791-9633853,9633953-9634060,9634143-9634259,
9634343-9634505,9634646-9634743,9634852-9634949,
9635054-9635190,9635309-9635530,9635625-9635830,
9636758-9636845,9638085-9638668
Length = 1054
Score = 55.6 bits (128), Expect = 4e-08
Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Frame = +1
Query: 1 VRMTVYEYFMKEKKYRIKYP-DLNCLWVGPKDKNIYLPMELVEVAYGQARNKQLNDRQLS 177
V ++VYEYF+K + ++Y D C+ VG + Y P+EL + Q K L+ Q S
Sbjct: 493 VEVSVYEYFVKNRGIELRYSGDFPCINVGKPKRPTYFPIELCSLVPLQRYTKALSTLQRS 552
Query: 178 TMVREAATPPDVRKRKIEEVIQKMNYRRINSLKHTAWR*PMSFIKLKRKFSKRPH*KWVH 357
++V ++ P+ R + +V+++ NY L F ++ + + P K +
Sbjct: 553 SLVEKSRQKPEERMSVLSDVLKRSNYDSEPMLNSCGISIARGFTQVAGRVLQAPKLKAGN 612
Query: 358 GNLLYQR 378
G L+ R
Sbjct: 613 GEDLFAR 619
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +3
Query: 282 GLEIANEFYQVEAKILEAPTLEVGPRQFTVPKKGVWQAN--CLLKPEALNSWGFIAIELD 455
G+ IA F QV ++L+AP L+ G + + G W N L+K ++ W +
Sbjct: 588 GISIARGFTQVAGRVLQAPKLKAGNGEDLFARNGRWNFNNKRLIKASSIEKWA--VVNFS 645
Query: 456 PRGCNYEDIVSKLMNTG 506
R CN D+V ++ G
Sbjct: 646 AR-CNIRDLVRDIIKCG 661
>04_01_0263 -
3532481-3532656,3532710-3532719,3532754-3532785,
3533237-3533348,3533586-3533649,3533778-3533843,
3533946-3534073,3534205-3534342,3534427-3534539,
3534611-3534776,3535045-3535107,3535197-3535304,
3535408-3535524,3535620-3535785,3535942-3536039,
3536136-3536233,3536378-3536514,3536654-3536878,
3536971-3537176,3537286-3537525
Length = 820
Score = 54.4 bits (125), Expect = 8e-08
Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Frame = +1
Query: 1 VRMTVYEYFMKEKKYRIKYP-DLNCLWVGPKDKNIYLPMELVEVAYGQARNKQLNDRQLS 177
V +TVY+YF+K K ++Y +L C+ VG + Y P+EL + Q K L+ Q S
Sbjct: 351 VEVTVYDYFVKNKGIELRYSGNLPCINVGKPKRPTYFPIELCSLIPLQRYTKALSTLQRS 410
Query: 178 TMVREAATPPDVRKRKIEEVIQKMNYRRINSLKHTAWR*PMSFIKLKRKFSKRPH*KWVH 357
++V ++ P R + + ++ NY L+ + +F +++ + + P K +
Sbjct: 411 SLVEKSRQKPQERMSVLNDALRHSNYDSDPMLRASGISIAQNFTQVEGRVLQPPKLKAGN 470
Query: 358 GNLLYQR 378
G ++ R
Sbjct: 471 GEDIFPR 477
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 282 GLEIANEFYQVEAKILEAPTLEVGPRQFTVPKKGVWQAN 398
G+ IA F QVE ++L+ P L+ G + P+ G W N
Sbjct: 446 GISIAQNFTQVEGRVLQPPKLKAGNGEDIFPRNGRWNFN 484
>07_03_0329 +
16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/82 (32%), Positives = 42/82 (51%)
Frame = +1
Query: 10 TVYEYFMKEKKYRIKYPDLNCLWVGPKDKNIYLPMELVEVAYGQARNKQLNDRQLSTMVR 189
TV EYF K+ ++ + L CL VG K++ YLPMEL + GQ +L+ Q+S ++
Sbjct: 533 TVKEYFNKKYNLKLAFGYLPCLQVGSKERPNYLPMELCNIVPGQRYKNRLSPTQVSNLIN 592
Query: 190 EAATPPDVRKRKIEEVIQKMNY 255
P R+ I + + Y
Sbjct: 593 ITNDRPCDRESSIRQTVSSNQY 614
>03_04_0231 + 19050105-19050567,19051376-19052648,19052743-19054171
Length = 1054
Score = 47.6 bits (108), Expect = 1e-05
Identities = 26/79 (32%), Positives = 44/79 (55%)
Frame = +1
Query: 7 MTVYEYFMKEKKYRIKYPDLNCLWVGPKDKNIYLPMELVEVAYGQARNKQLNDRQLSTMV 186
+ V +YF + + I++ +L CL +G + K Y+PMEL V GQ +L+D Q S ++
Sbjct: 495 LMVVDYFKEHYNHDIQFRNLPCLQIG-RSKPCYVPMELCVVCEGQKFLGKLSDEQTSKIL 553
Query: 187 REAATPPDVRKRKIEEVIQ 243
+ P RK I+ V++
Sbjct: 554 KMGCERPSERKGIIKGVVK 572
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 614 LVVVVSGRGRDYYHKLKQIAELKVGILTQC 703
L++ V R Y LK+IAE +G++TQC
Sbjct: 715 LLICVMERRHQGYADLKRIAETSIGVVTQC 744
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 37.9 bits (84), Expect = 0.008
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +1
Query: 19 EYFMKEKKYRIKYPDLNCLWVGP-KDKNIYLPMELVEVAYGQARNK-QLNDRQLSTMVRE 192
+Y+ ++ I+Y L CL + KDK Y+P+EL ++ GQ K LN T+
Sbjct: 465 DYYSQQYGKVIEYQMLPCLDLSKSKDKQNYVPIELCDLLEGQRYPKASLNRNSDKTLKEM 524
Query: 193 AATPPDVRKRKIEEVI 240
A P RK +I E++
Sbjct: 525 ALIPASSRKEEILELV 540
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/55 (21%), Positives = 27/55 (49%)
Frame = +3
Query: 237 DSKDELSKNQFFKTYGLEIANEFYQVEAKILEAPTLEVGPRQFTVPKKGVWQANC 401
++ D + + + +G+ + + +V + L P+L++G PK + Q NC
Sbjct: 541 NADDGPCRGEIAQQFGISLDVQMMEVTGRTLPPPSLKLGTSSGQPPKFNIDQPNC 595
>02_04_0615 -
24410124-24410290,24410592-24410623,24410717-24410811,
24413636-24413706,24414278-24414410,24414488-24414551,
24414628-24414690,24414784-24414924,24415130-24415203,
24415346-24415470,24415545-24415686,24415775-24415777
Length = 369
Score = 34.3 bits (75), Expect = 0.096
Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Frame = +2
Query: 560 INDLHKSM----LHALEKQVNFLVVVVSGRGRDYYHKLKQIAELKVGILTQC 703
INDL+ + +H+ K+ L++V+ R Y K+K++ E K+G+++QC
Sbjct: 14 INDLNIAAALKSIHSTAKEQLQLLIVILPEERGNYGKIKRVCETKLGLVSQC 65
>12_02_0414 + 18824347-18825161,18826018-18828229
Length = 1008
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 488 EANEYRSQMGMNVTQPKMACFNIRINDLHKSMLHALEKQVNFLVVVVSGRGR---DYYHK 658
+A +RS G++V PK+ I ++ K++ + L +SG DY+H+
Sbjct: 905 DARGFRSLRGLHVQAPKLPKVIIVVSGKDKTVAMKHLTTLQLLCKDISGFQAAHIDYFHR 964
Query: 659 LKQIAELK 682
L+Q+ LK
Sbjct: 965 LEQVVLLK 972
>03_03_0279 -
16134422-16134608,16134703-16134947,16135046-16135364,
16135451-16135675,16135780-16135946,16136030-16136146,
16136234-16136407,16136489-16136584,16136669-16136885,
16137005-16137123,16137249-16137441,16137562-16137713,
16137809-16137938,16138667-16138776
Length = 816
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2
Query: 521 SCPFATGIH*LRHDVFIITSTWIQFYGNE 435
SC F T + + H FIITST+ + GN+
Sbjct: 465 SCQFTTDLIAMNHADFIITSTFQEIAGNK 493
>01_06_1795 -
39925019-39926029,39926265-39926408,39927200-39927277,
39927722-39927838,39927925-39927981,39928492-39928623,
39928725-39928922,39929364-39929474,39929570-39929785,
39929879-39930064,39930590-39931192
Length = 950
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/51 (31%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Frame = +1
Query: 112 MELVEVAYGQARNKQLNDRQLSTMV---REAATPPDVRKRKIEEVIQKMNY 255
++LV+ + G+AR+K DR +S + + PDV +RK++E++ ++ Y
Sbjct: 26 LDLVK-SIGEARSKAEEDRIISRELDHLKRRLADPDVPRRKMKELLLRLVY 75
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,051,237
Number of Sequences: 37544
Number of extensions: 473620
Number of successful extensions: 1086
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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