Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021244
         (708 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   2.1  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   2.8  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   3.7  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   3.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.7  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   5.0  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   5.0  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    22   5.0  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    22   5.0  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    22   5.0  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    22   5.0  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    22   5.0  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    22   5.0  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    22   6.6  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   8.7  

>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 14/55 (25%), Positives = 25/55 (45%)
 Frame = +3

Query: 246 DELSKNQFFKTYGLEIANEFYQVEAKILEAPTLEVGPRQFTVPKKGVWQANCLLK 410
           ++LS N+  +T   E  N  Y+     ++  T ++     T PK    +  C+LK
Sbjct: 434 NDLSINEEKRTIENEQLNRMYKSYPNYIDKETKDMNLEISTRPKSNTVENACVLK 488


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 635 VQKRPRPGN*PVFLERAAYSCAGH 564
           V K P P + P+F  R  +SC G+
Sbjct: 50  VSKVPGPFSLPIFGTRWIFSCIGY 73


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = +1

Query: 22  YFMKEKKYRIKYPDLNCLWVGPKDKNIYLPMELVE 126
           Y++   +Y + Y    C W       I L   LVE
Sbjct: 54  YYIYNPRYPLPYSGSKCTWTITSYHRINLKCSLVE 88


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 249 ELSKNQFFKTYGLEIANEFYQVEAKI 326
           ELS  Q F+ +   I ++ YQV+A +
Sbjct: 247 ELSNKQRFEYFTRTIPSDHYQVKAMV 272


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +1

Query: 55   YPDLNCLWVGPKDKNIYLPMELVEVAYGQARNKQLNDRQ 171
            YPDL+ L+  P DK      +L+ V +   + +Q   +Q
Sbjct: 1470 YPDLHNLYAVPTDKKSACDSKLI-VDHSSQKTQQQQPQQ 1507


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = -2

Query: 542 PSLVGSRSCPFATGIH*LRHDVFIITSTWIQFYGNEAP*IQS 417
           P L+   S  F    H    D+F  T+ W +   NEA  I S
Sbjct: 102 PQLLREMSALFKLFYHAKDFDIFFKTALWAKNNINEAQYIYS 143


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = -2

Query: 542 PSLVGSRSCPFATGIH*LRHDVFIITSTWIQFYGNEAP*IQS 417
           P L+   S  F    H    D+F  T+ W +   NEA  I S
Sbjct: 102 PQLLREMSALFKLFYHAKDFDIFFKTALWAKNNINEAQYIYS 143


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 625 RFWTGPRLLSQAETDCRTQS 684
           +FWT PRL  +  T   T S
Sbjct: 65  QFWTDPRLAFKKRTGVETLS 84


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 625 RFWTGPRLLSQAETDCRTQS 684
           +FWT PRL  +  T   T S
Sbjct: 65  QFWTDPRLAFKKRTGVETLS 84


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = +3

Query: 312 VEAKILEAPTLEVGPRQFTVPKKGV-WQANCLLKPEALNSW 431
           +E   + A T +     F    +G  W  N LL+P  L+ W
Sbjct: 44  IERDQMMAATFDFPSLSFEDSDEGSNWNWNTLLRPNFLDGW 84


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = +3

Query: 312 VEAKILEAPTLEVGPRQFTVPKKGV-WQANCLLKPEALNSW 431
           +E   + A T +     F    +G  W  N LL+P  L+ W
Sbjct: 44  IERDQMMAATFDFPSLSFEDSDEGSNWNWNTLLRPNFLDGW 84


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = +3

Query: 312 VEAKILEAPTLEVGPRQFTVPKKGV-WQANCLLKPEALNSW 431
           +E   + A T +     F    +G  W  N LL+P  L+ W
Sbjct: 44  IERDQMMAATFDFPSLSFEDSDEGSNWNWNTLLRPNFLDGW 84


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 625 RFWTGPRLLSQAETDCRTQS 684
           +FWT PRL  +  T   T S
Sbjct: 4   QFWTDPRLAFKKRTGVETLS 23


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 387 WQANCLLKPEALNSW 431
           W  N LL+P  L+ W
Sbjct: 26  WNWNTLLRPNFLDGW 40


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -3

Query: 469 LHPRGSNSMAMKPHEFRASGFRRQLACHTP 380
           L+P  S   ++  H    S    + ACH+P
Sbjct: 273 LNPNSSLQPSLASHHSHLSSALGRSACHSP 302


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,096
Number of Sequences: 438
Number of extensions: 5318
Number of successful extensions: 22
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)