Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021243
(555 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 105 2e-23
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 90 1e-18
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 76 2e-14
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 64 5e-11
08_01_0397 - 3509186-3510291,3510322-3512335 64 7e-11
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 64 9e-11
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 61 5e-10
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 59 2e-09
02_01_0381 - 2764331-2764342,2768966-2769907 51 5e-07
06_03_1255 + 28780181-28781172,28782065-28782932 50 9e-07
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 46 2e-05
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 44 1e-04
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 40 0.001
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 40 0.001
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 39 0.003
03_05_0865 - 28365430-28367640 37 0.012
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 35 0.038
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 35 0.050
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 33 0.12
01_07_0333 - 42813789-42814073,42814229-42814315,42815083-428151... 33 0.20
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 32 0.27
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 32 0.35
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 32 0.35
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 32 0.35
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 31 0.62
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 31 0.62
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 30 1.4
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 29 3.3
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 28 4.4
01_06_0572 - 30337572-30338107,30338209-30338422,30338505-303388... 28 4.4
08_01_0321 + 2872609-2873027,2873477-2873905,2874743-2874944,287... 28 5.8
04_01_0618 - 8094991-8097288 28 5.8
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 105 bits (253), Expect = 2e-23
Identities = 45/89 (50%), Positives = 59/89 (66%)
Frame = +1
Query: 241 PRLGFVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVDVHNPIQYFEEANFPD 420
P+ F SL PF KNFY P V S +V +YR ++TV G DV P++YF+EANFPD
Sbjct: 106 PKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPD 165
Query: 421 YVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
Y Q + G+ EPTPIQ+QGWP+A+ G+
Sbjct: 166 YCMQAIAKSGFVEPTPIQSQGWPMALKGR 194
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 89.8 bits (213), Expect = 1e-18
Identities = 39/82 (47%), Positives = 52/82 (63%)
Frame = +1
Query: 262 LQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVDVHNPIQYFEEANFPDYVQQGVK 441
L F KNFY P+V + EVE YR E+TV G DV P++ F + FP+YV Q +
Sbjct: 48 LPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEIT 107
Query: 442 TMGYKEPTPIQAQGWPIAMSGK 507
G+ EPTPIQ+QGWP+A+ G+
Sbjct: 108 KAGFVEPTPIQSQGWPMALRGR 129
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 75.8 bits (178), Expect = 2e-14
Identities = 33/84 (39%), Positives = 49/84 (58%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVDVHNPIQYFEEANFPDYVQQG 435
+ +PFNK+FY+ P+V S EV +Y + + VSG DV PI+ F + FP +
Sbjct: 174 IEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMNA 233
Query: 436 VKTMGYKEPTPIQAQGWPIAMSGK 507
+ GY++PT IQ Q PI +SG+
Sbjct: 234 IAKQGYEKPTTIQCQALPIVLSGR 257
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 64.5 bits (150), Expect = 5e-11
Identities = 31/84 (36%), Positives = 46/84 (54%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVDVHNPIQYFEEANFPDYVQQG 435
+ QPF KN Y + + EV YR N E+ V G DV PI+ + ++ +
Sbjct: 240 IEYQPFRKNLYIEVKDITMMTGEEVATYRKNLELKVHGKDVPKPIKTWVQSGLTSKLLDT 299
Query: 436 VKTMGYKEPTPIQAQGWPIAMSGK 507
+K +G+++P PIQAQ PI MSG+
Sbjct: 300 IKKLGFEKPMPIQAQALPIIMSGR 323
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 64.1 bits (149), Expect = 7e-11
Identities = 31/84 (36%), Positives = 46/84 (54%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVDVHNPIQYFEEANFPDYVQQG 435
+ QPF KNFY + K + EV YR E+ V G DV PI+ + ++ +
Sbjct: 379 IDYQPFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQSGLTSKLLDT 438
Query: 436 VKTMGYKEPTPIQAQGWPIAMSGK 507
+K +G+++P IQAQ PI MSG+
Sbjct: 439 IKKLGFEKPMSIQAQALPIIMSGR 462
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 63.7 bits (148), Expect = 9e-11
Identities = 27/56 (48%), Positives = 36/56 (64%)
Frame = +1
Query: 331 EEYRNNHEVTVSGVDVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAM 498
E YR+ HE+TV G +V PI FE FP + + ++ G+ PTPIQAQ WPIA+
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIAL 185
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 61.3 bits (142), Expect = 5e-10
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 SLQPFNKNFYDPH-PTVLKRSPYEVEEYRNNHEVTVSGVDVHNPIQYFEEANFPDYVQQG 435
S++P ++ F P+ P++ + YR +HEVT G +V P FE FP + Q
Sbjct: 564 SMRPPSRMFAPPNFPSIAS-----ADAYRQHHEVTAVGENVPPPFMTFEATGFPPEILQE 618
Query: 436 VKTMGYKEPTPIQAQGWPIAMSGK 507
+ G+ PTPIQAQ WP+A+ +
Sbjct: 619 IHAAGFLNPTPIQAQTWPVALQNR 642
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 59.3 bits (137), Expect = 2e-09
Identities = 24/59 (40%), Positives = 34/59 (57%)
Frame = +1
Query: 331 EEYRNNHEVTVSGVDVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
E YR HE+T+ G + P F+ FP + + V+ G+ PTPIQAQ WPIA+ +
Sbjct: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREVQQAGFSAPTPIQAQSWPIALRNR 218
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 51.2 bits (117), Expect = 5e-07
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Frame = +1
Query: 229 EHASPRLGFVSLQPFNKN--FYDP------HPTVLKRSPY-EVEEYRNNHEVTVSGVDVH 381
EH S R +S++ K + DP P L+R P + +E R + V G DV
Sbjct: 119 EHLSDRKTLMSVRELAKGITYSDPLKTGWKPPLRLRRMPRAKADELRRKWHILVDGDDVP 178
Query: 382 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
P + F + P+ + + ++ G +PTPIQ QG P+ +SG+
Sbjct: 179 PPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGR 220
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 50.4 bits (115), Expect = 9e-07
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +1
Query: 298 PTVLKRSPYE-VEEYRNNHEVTVSGVDVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 474
P L+R P + R + + V G DV P + F + P+ + + ++ G ++PTPIQ
Sbjct: 141 PLRLRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTPIQ 200
Query: 475 AQGWPIAMSGK 507
QG P+A+SG+
Sbjct: 201 VQGLPVALSGR 211
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +1
Query: 355 VTVSGVDVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
V VSG DV P FE A + V + V GY+ PTP+Q PIA++G+
Sbjct: 72 VEVSGEDVPPPADGFEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGR 122
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Frame = +1
Query: 340 RNNHEVTVSGVDVHNPIQYFEEA----NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
R ++ +SG +V P++ FEE Y+ + +G++EPTPIQ Q PI +SG+
Sbjct: 125 RKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILLSGR 184
Query: 508 I*LAYS-NGFRQTLA 549
A + G +TLA
Sbjct: 185 ECFACAPTGSGKTLA 199
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +1
Query: 355 VTVSGVDVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
V SG DV P+ F E + D + + ++ Y +PTP+Q PI+++G+
Sbjct: 225 VETSGHDVPPPVNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGR 275
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +1
Query: 325 EVEEYRNNHEVTVSGVDVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504
++ R+ ++ V G DV +PI F + P+ + ++ GY PTP+Q Q P ++
Sbjct: 160 QIASLRSKLDICVKGEDVPDPIMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICN 219
Query: 505 K 507
+
Sbjct: 220 R 220
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +1
Query: 355 VTVSGVDVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
V SG DV P F E + D + + ++ Y +PTP+Q PI+++G+
Sbjct: 311 VETSGHDVPPPANTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGR 361
>03_05_0865 - 28365430-28367640
Length = 736
Score = 36.7 bits (81), Expect = 0.012
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +1
Query: 337 YRNNHEVTVSGVDVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAM 498
+R + ++ G V P++ + E+ + + V+ GYKEP+PIQ P+ +
Sbjct: 297 FREDFNISYKGSKVPRPMRKWSESKLGTELLRAVEKAGYKEPSPIQMASIPLGL 350
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 35.1 bits (77), Expect = 0.038
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504
FE + V +GV+ GY+ PTPIQ + P+ ++G
Sbjct: 28 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAG 63
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 34.7 bits (76), Expect = 0.050
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 355 VTVSGVDVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
V SG +V P+ F E + + ++ Y PTP+Q PI+++G+
Sbjct: 143 VETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGR 193
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
F E N + + + +GY++PTPIQA P+A++G+
Sbjct: 196 FLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGR 232
>01_07_0333 -
42813789-42814073,42814229-42814315,42815083-42815172,
42815555-42815623,42815859-42815888,42816060-42816164,
42816454-42816549,42816647-42816760,42816862-42816955,
42817027-42817190
Length = 377
Score = 32.7 bits (71), Expect = 0.20
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 415 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LAYS-NGFRQTLA 549
P++V Q + +GY PT +Q Q P+ +SG+ + ++ G +TLA
Sbjct: 49 PEHVLQRAEEVGYVVPTEVQEQSLPVLLSGQDCILHAQTGSGKTLA 94
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 32.3 bits (70), Expect = 0.27
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +1
Query: 445 MGYKEPTPIQAQGWPIAMSGK-I*LAYSNGFRQTLA 549
MG++ PT IQAQ P+AMSG+ + + + G +TLA
Sbjct: 42 MGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLA 77
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 31.9 bits (69), Expect = 0.35
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LAYS-NGFRQTLA 549
FE+ + G+ G++ P+PIQ + PIA++G LA + NG +T A
Sbjct: 149 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAA 200
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 31.9 bits (69), Expect = 0.35
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LAYS-NGFRQTLA 549
FE+ + G+ G++ P+PIQ + PIA++G LA + NG +T A
Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAA 177
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 31.9 bits (69), Expect = 0.35
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LAYS-NGFRQTLA 549
FE+ + G+ G++ P+PIQ + PIA++G LA + NG +T A
Sbjct: 136 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAA 187
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 31.1 bits (67), Expect = 0.62
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 385 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
P+ F P V K G++ P+PIQA WP + G+
Sbjct: 92 PLSSFAATALPPQVLDCCK--GFERPSPIQAYAWPYLLDGR 130
>01_01_0602 -
4484972-4485450,4485949-4485997,4486108-4486237,
4486636-4486778,4486819-4486877,4487167-4487200,
4487489-4487629,4487719-4487907,4488027-4488122,
4488163-4488225,4488588-4489097
Length = 630
Score = 31.1 bits (67), Expect = 0.62
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 388 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG-KI*LAYSNGFRQTLA 549
+ FEE + V + MG +PT IQ G P ++G + L G +TLA
Sbjct: 109 VDSFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKTLA 163
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 385 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
P + E P+ V MG+KEPT IQA+ P A+ G+
Sbjct: 40 PSTFAELGVVPELVA-ACDAMGWKEPTRIQAEAIPHALEGR 79
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +1
Query: 436 VKTMGYKEPTPIQAQGWPIAM-SGK-I*LAYSNGFRQTLA 549
V+ +G+KEPTPIQ +P A GK + A G +TLA
Sbjct: 157 VRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLA 196
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
F+E + +++ ++ G + TPIQ + P+ + GK
Sbjct: 85 FDELGLDEQLKRALRKKGLDKATPIQREAIPLILEGK 121
>01_06_0572 -
30337572-30338107,30338209-30338422,30338505-30338862,
30338948-30339048,30339185-30339749,30340553-30340664,
30341196-30341372,30341589-30341686,30341859-30341953,
30342078-30342158
Length = 778
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 361 VSGVDVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 480
VS VDV+ I+Y ++ P V +T+ +P+P+ AQ
Sbjct: 475 VSSVDVNAIIRYINSSSSPTAVLDPSRTVVDVKPSPVMAQ 514
>08_01_0321 + 2872609-2873027,2873477-2873905,2874743-2874944,
2875909-2875947,2876309-2876354,2877380-2877922,
2878827-2880847,2880972-2881215,2881642-2881684,
2881923-2881962,2883580-2883675,2883712-2883759,
2883964-2884290
Length = 1498
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +2
Query: 233 MRRPDWDLFHSNLSTKTFMIHILQFSKDHH 322
MR PD D S K F IH+ S DHH
Sbjct: 1226 MRSPDDDKPTSWSDQKVFEIHVYPSSNDHH 1255
>04_01_0618 - 8094991-8097288
Length = 765
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 399 KVLNRIMNINATYSYLVIISVLFD 328
K+L +M IN YSY VI + LFD
Sbjct: 327 KILQFLMAINTNYSYRVIRAGLFD 350
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,872,987
Number of Sequences: 37544
Number of extensions: 233083
Number of successful extensions: 585
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1257681096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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