Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021242
         (801 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    28   0.075
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    24   1.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.8  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   3.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   3.7  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   6.5  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    21   8.7  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    21   8.7  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    21   8.7  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    21   8.7  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    21   8.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 28.3 bits (60), Expect = 0.075
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 619 RNNFSIRYWSWNYRGCWHQTC 557
           R+NF   +  WNY  CW   C
Sbjct: 746 RHNFKGLHLDWNYPVCWQSNC 766



 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/25 (32%), Positives = 9/25 (36%)
 Frame = -3

Query: 631  ELFNRNNFSIRYWSWNYRGCWHQTC 557
            +    NNF      W Y  CW   C
Sbjct: 1930 DFIETNNFDGLDLDWEYPKCWQVDC 1954


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 415 TSKEGSRRANYPLPAREVVTKNNDTGL 495
           T     + A+YP P  E+V + ND  +
Sbjct: 250 TPARNPKEADYPSPLYELVDRRNDENI 276


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 693 AEHIVGEPAF*KTPVQYQNPIAVPSVNVEWADNF 794
           A   V  P     P  Y  P++V  ++V W +NF
Sbjct: 228 ASSFVVWPLVENNPTLYLIPVSVILISVGWWENF 261


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 693 AEHIVGEPAF*KTPVQYQNPIAVPSVNVEWADNF 794
           A   V  P     P  Y  P++V  ++V W +NF
Sbjct: 228 ASSFVVWPLVENNPTLYLIPVSVILISVGWWENF 261


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +1

Query: 415 TSKEGSRRANYPLPAREVVTKNND 486
           T K   + A+YP P  E++ +  D
Sbjct: 242 TPKRNPKEADYPAPLYELIDRKYD 265


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 714 PAF*KTPVQYQNPIAVPSVNVEWADNF 794
           P     P  Y  P++V  ++V W +NF
Sbjct: 2   PLVENNPTLYLIPVSVILISVGWWENF 28


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 5/16 (31%), Positives = 9/16 (56%)
 Frame = -3

Query: 610 FSIRYWSWNYRGCWHQ 563
           +++ YW   Y   WH+
Sbjct: 117 YAVYYWRQQYEDFWHR 132


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +3

Query: 9   LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 119
           +YAC  +  + V+    +RR   +   +++VP +L+S
Sbjct: 190 VYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +3

Query: 9   LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 119
           +YAC  +  + V+    +RR   +   +++VP +L+S
Sbjct: 190 VYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +3

Query: 9   LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 119
           +YAC  +  + V+    +RR   +   +++VP +L+S
Sbjct: 190 VYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +3

Query: 9   LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 119
           +YAC  +  + V+    +RR   +   +++VP +L+S
Sbjct: 190 VYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +3

Query: 9   LYACLKD*AMHVSVQAVLRRYREWLNISVLVP*ILLS 119
           +YAC  +  + V+    +RR   +   +++VP +L+S
Sbjct: 190 VYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 308 HLKDASPVLDHAICKSYPIH 249
           +L D+SP L+ A C+ +  H
Sbjct: 63  NLCDSSPCLNGATCQDHTTH 82


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,040
Number of Sequences: 336
Number of extensions: 3885
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)