Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021242
         (801 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     27   0.89 
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    24   6.3  
AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8...    23   8.3  

>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 26.6 bits (56), Expect = 0.89
 Identities = 16/57 (28%), Positives = 19/57 (33%)
 Frame = -1

Query: 783 PTRHSPKAPR*DFDIEPAFFRTPAHRRYAPQTCQYHRGCGAPTARRTNATTSFLTAT 613
           P    P  PR  F   P + R P HR              +PT    + TT   T T
Sbjct: 90  PPFRPPWHPRPPFGGRPWWLRPPFHRPTTSTAAPEGTSVASPTTAEASTTTEAATTT 146


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
 Frame = -2

Query: 437 RLLPSLDVVAVSQAPSPESNPD--SPLPVTTMVVAETTIES**GRHLKDASPVLDHAICK 264
           RL   +++  +S  P P ++P   SP  +   + A    +S     + + S  L H  CK
Sbjct: 354 RLRWMMEMPGMSVPPQPHTHPSYGSPAEIPKHISALGAKQS--KMEVMELSD-LHHPNCK 410

Query: 263 SYPIHQN*RLRTRGPPSIGFDLIKALIPSLVRVLIACISSRITTVIQVTE*DLRNQN*YI 84
                 N +L + G   IG D  +    S   +L++  +S+ T  ++     LRN++ YI
Sbjct: 411 -----MNRKLNS-GDLGIGADSCRRESESSDSILLSPEASKATEAVEFIAEHLRNEDLYI 464

Query: 83  E 81
           +
Sbjct: 465 Q 465


>AJ459961-1|CAD31060.1|  700|Anopheles gambiae prophenoloxidase 8
           protein.
          Length = 700

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 15/42 (35%), Positives = 18/42 (42%)
 Frame = -3

Query: 484 RYFSSLPPVPGVGNLRACCLPWMW*PFLRLPLRNRTLIPRYP 359
           RY   L  +  + NLR       +   LR    NRT  PRYP
Sbjct: 263 RYAQGLGRIEPLANLREPVREAYYPKLLRTS-NNRTFCPRYP 303


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 833,638
Number of Sequences: 2352
Number of extensions: 18105
Number of successful extensions: 67
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)