Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021241
(836 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41558-2|AAK39245.2| 457|Caenorhabditis elegans Hypothetical pr... 100 3e-21
AC006708-18|AAF60424.2| 450|Caenorhabditis elegans Hypothetical... 94 1e-19
AC006708-17|AAK68884.2| 435|Caenorhabditis elegans Hypothetical... 94 1e-19
AF016430-4|AAB65372.1| 594|Caenorhabditis elegans Hypothetical ... 33 0.25
AF026214-4|AAB71315.1| 283|Caenorhabditis elegans Hypothetical ... 31 1.0
Z49911-6|CAA90132.1| 831|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z37983-5|CAA86059.2| 405|Caenorhabditis elegans Hypothetical pr... 28 7.2
AF106583-6|AAD03137.1| 233|Caenorhabditis elegans Hypothetical ... 28 7.2
Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z83316-3|CAB05895.3| 1054|Caenorhabditis elegans Hypothetical pr... 28 9.5
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 28 9.5
>U41558-2|AAK39245.2| 457|Caenorhabditis elegans Hypothetical
protein K02B2.1 protein.
Length = 457
Score = 99.5 bits (237), Expect = 3e-21
Identities = 47/101 (46%), Positives = 65/101 (64%)
Frame = +1
Query: 502 LQVFFVESICDDPRIIEQNIMEVKVSSPDYTNIQNTDNVLNDFMLRIEHYQEKYEPLDES 681
L+ FF+ES+CDDP II+ N+ +VKV+SPDY + + DFM RIE+Y+++YEPLDES
Sbjct: 145 LRCFFIESVCDDPAIIDCNVTDVKVNSPDYKGLMTAEQAKEDFMNRIENYKKQYEPLDES 204
Query: 682 LESEYSFMEDIRYRREGGRSQARRAHTSRIVYYLMTYILYP 804
+ SF++ I R Q R SR+VY+LM L P
Sbjct: 205 EDESLSFIKVINAGRSFKVHQVRGHVQSRVVYFLMNIHLLP 245
Score = 68.1 bits (159), Expect = 7e-12
Identities = 37/79 (46%), Positives = 53/79 (67%), Gaps = 6/79 (7%)
Frame = +2
Query: 263 TRVFNLGEYRRH-ATSAYTSH----EFFRADNKEAMAIRQQCALDALQDVCEWLTKG-GE 424
T+VFN+GEYRR A +A H FF +N +A+ +R + A A++D+ ++L G G
Sbjct: 60 TKVFNVGEYRRSDANAADAIHGANASFFSPNNADALKVRAESARRAMEDMADYLNSGTGG 119
Query: 425 VAVFDATNSTLDRRRMIRD 481
VA+FDATN+T DRRR+I D
Sbjct: 120 VAIFDATNTTKDRRRIIID 138
Score = 57.6 bits (133), Expect = 1e-08
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +3
Query: 153 SNYVNIPHVIAMVGLPARGKTYISKKLSRYLNW 251
S+ V +P+VI MVGLPARGKTYISKKL RYL W
Sbjct: 23 SDQVRVPNVIVMVGLPARGKTYISKKLCRYLKW 55
Score = 35.1 bits (77), Expect = 0.062
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 726 RRWSFTSTKGTYKSDCV-LLDDIHIVPRTIYLTRHGES 836
R + +G +S V L +IH++PR+IYLTRHG+S
Sbjct: 219 RSFKVHQVRGHVQSRVVYFLMNIHLLPRSIYLTRHGQS 256
>AC006708-18|AAF60424.2| 450|Caenorhabditis elegans Hypothetical
protein Y110A7A.6a protein.
Length = 450
Score = 93.9 bits (223), Expect = 1e-19
Identities = 45/100 (45%), Positives = 62/100 (62%)
Frame = +1
Query: 505 QVFFVESICDDPRIIEQNIMEVKVSSPDYTNIQNTDNVLNDFMLRIEHYQEKYEPLDESL 684
+VFFVES+CDDP II NI EVK++SPDY I + + DF+ RIE+Y+ +YEPLDE
Sbjct: 147 RVFFVESVCDDPDIINSNITEVKINSPDYKGIMSQEEAKEDFLKRIENYRMQYEPLDEDH 206
Query: 685 ESEYSFMEDIRYRREGGRSQARRAHTSRIVYYLMTYILYP 804
+ E S+++ I + SR+VY+LM L P
Sbjct: 207 DEELSYIKVINAGKSFYVHNVNGHVQSRVVYFLMNIHLLP 246
Score = 68.1 bits (159), Expect = 7e-12
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Frame = +2
Query: 257 INTRVFNLGEYRRHATSAYTS--HEFFRADNKEAMAIRQQCALDALQDVCEWL-TKGGEV 427
I T+ FN+GEYRR A + +EFF +N IR +CA A++D+ +L K GEV
Sbjct: 58 IKTKAFNVGEYRRRACNLEEEGENEFFSPNNARGQKIRDECAKLAIEDMGRYLDNKEGEV 117
Query: 428 AVFDATNSTLDRRRMIRDLVVHKM 499
A+ DATN+T DRR+++ + + M
Sbjct: 118 AILDATNTTRDRRKLLMEFCRNMM 141
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/42 (66%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = +3
Query: 132 FFGDGERSN-YVNIPHVIAMVGLPARGKTYISKKLSRYLNWI 254
F + SN V +P+VIA+VGLPARGKTYIS KL RYLNWI
Sbjct: 15 FVPKSDNSNEQVRVPNVIALVGLPARGKTYISHKLCRYLNWI 56
Score = 33.9 bits (74), Expect = 0.14
Identities = 13/19 (68%), Positives = 18/19 (94%)
Frame = +3
Query: 780 LDDIHIVPRTIYLTRHGES 836
L +IH++PR+IYL+RHGES
Sbjct: 239 LMNIHLLPRSIYLSRHGES 257
>AC006708-17|AAK68884.2| 435|Caenorhabditis elegans Hypothetical
protein Y110A7A.6b protein.
Length = 435
Score = 93.9 bits (223), Expect = 1e-19
Identities = 45/100 (45%), Positives = 62/100 (62%)
Frame = +1
Query: 505 QVFFVESICDDPRIIEQNIMEVKVSSPDYTNIQNTDNVLNDFMLRIEHYQEKYEPLDESL 684
+VFFVES+CDDP II NI EVK++SPDY I + + DF+ RIE+Y+ +YEPLDE
Sbjct: 153 RVFFVESVCDDPDIINSNITEVKINSPDYKGIMSQEEAKEDFLKRIENYRMQYEPLDEDH 212
Query: 685 ESEYSFMEDIRYRREGGRSQARRAHTSRIVYYLMTYILYP 804
+ E S+++ I + SR+VY+LM L P
Sbjct: 213 DEELSYIKVINAGKSFYVHNVNGHVQSRVVYFLMNIHLLP 252
Score = 68.1 bits (159), Expect = 7e-12
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Frame = +2
Query: 257 INTRVFNLGEYRRHATSAYTS--HEFFRADNKEAMAIRQQCALDALQDVCEWL-TKGGEV 427
I T+ FN+GEYRR A + +EFF +N IR +CA A++D+ +L K GEV
Sbjct: 64 IKTKAFNVGEYRRRACNLEEEGENEFFSPNNARGQKIRDECAKLAIEDMGRYLDNKEGEV 123
Query: 428 AVFDATNSTLDRRRMIRDLVVHKM 499
A+ DATN+T DRR+++ + + M
Sbjct: 124 AILDATNTTRDRRKLLMEFCRNMM 147
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/42 (66%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Frame = +3
Query: 132 FFGDGERSN-YVNIPHVIAMVGLPARGKTYISKKLSRYLNWI 254
F + SN V +P+VIA+VGLPARGKTYIS KL RYLNWI
Sbjct: 21 FVPKSDNSNEQVRVPNVIALVGLPARGKTYISHKLCRYLNWI 62
Score = 33.9 bits (74), Expect = 0.14
Identities = 13/19 (68%), Positives = 18/19 (94%)
Frame = +3
Query: 780 LDDIHIVPRTIYLTRHGES 836
L +IH++PR+IYL+RHGES
Sbjct: 245 LMNIHLLPRSIYLSRHGES 263
>AF016430-4|AAB65372.1| 594|Caenorhabditis elegans Hypothetical
protein C05C8.5 protein.
Length = 594
Score = 33.1 bits (72), Expect = 0.25
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +1
Query: 514 FVESICDDPRIIEQNIMEVKVSSPDYTNIQNT--DNVLNDFMLRIEHYQEKYEPLDESLE 687
F +I D P I ++ ++ S P Y N+ +LND ++ +E +EK EPL+E+ +
Sbjct: 489 FDTAILDCPPISKKVRSKLHSSFPSYNGFVNSVASEMLNDSVILVEIDKEKIEPLEET-D 547
Query: 688 SEYSFMED 711
SE + D
Sbjct: 548 SEQGEVPD 555
>AF026214-4|AAB71315.1| 283|Caenorhabditis elegans Hypothetical
protein F52H2.5 protein.
Length = 283
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +1
Query: 520 ESICDDPRIIEQNIMEVKVS--SPDYTNIQNTDNVLNDFMLRIEHYQEKYEPLDESLESE 693
+ + D P++ Q + S + D T + DN++ + IEH+ EK + E + E
Sbjct: 3 DGLIDKPKLFVQGMFVTSTSGETADETTMSKIDNIITYGLQAIEHFLEKNDGQTEHSKLE 62
Query: 694 Y 696
Y
Sbjct: 63 Y 63
>Z49911-6|CAA90132.1| 831|Caenorhabditis elegans Hypothetical
protein M28.8 protein.
Length = 831
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = -3
Query: 369 CCLIAMASLLSALKNSWLVYADVACLL--YSPRLNTLVLILSSSGSVTVSWKCMSSRVP 199
C L +A +LS LK + + A L+ Y L ++VLIL SS + + W ++ VP
Sbjct: 396 CILAFVAVVLSLLKKENVEFLATAVLVAFYLTILISIVLILFSSAAFVLGWLTSAACVP 454
>Z37983-5|CAA86059.2| 405|Caenorhabditis elegans Hypothetical
protein B0393.6 protein.
Length = 405
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -3
Query: 150 VLHHRRTAYLNTSSLQLGFRHPSRDSQ*YSTQDIIGNLIS 31
++HHR +S++ + FRHPS + T+ II + S
Sbjct: 155 IVHHRARQLSTSSTVSVHFRHPSTVTGRLPTKGIINTIKS 194
>AF106583-6|AAD03137.1| 233|Caenorhabditis elegans Hypothetical
protein F23C8.9 protein.
Length = 233
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 643 EHYQEKYEPLDESLESEYSFMEDIRYRREGGRSQA 747
E +K +DE++E EY ME+ R R E +A
Sbjct: 182 EKSDQKTAEIDENVEEEYRMMEEERLREEQEAKEA 216
>Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical protein
B0379.3b protein.
Length = 1050
Score = 27.9 bits (59), Expect = 9.5
Identities = 22/104 (21%), Positives = 42/104 (40%), Gaps = 1/104 (0%)
Frame = +1
Query: 460 PTADDKRPCSPQDGLQVFFVESICDDPRIIEQNIMEVKVSSPDYTNI-QNTDNVLNDFML 636
P + ++P Q Q SI ++P+ +V P Y ++ Q ++ N +
Sbjct: 771 PPVNQQQPIYQQPAPQYPPYNSIQNNPQHGPSPFNYSQVPQPAYNHVGQQPSHMSNQPHI 830
Query: 637 RIEHYQEKYEPLDESLESEYSFMEDIRYRREGGRSQARRAHTSR 768
YQ Y P S+ ++ + ++ G RS H+S+
Sbjct: 831 NQNGYQNSYNPNQGPTSSDPNYGCNPQFNHYGSRSVYHEDHSSQ 874
>Z83316-3|CAB05895.3| 1054|Caenorhabditis elegans Hypothetical protein
B0379.3a protein.
Length = 1054
Score = 27.9 bits (59), Expect = 9.5
Identities = 22/104 (21%), Positives = 42/104 (40%), Gaps = 1/104 (0%)
Frame = +1
Query: 460 PTADDKRPCSPQDGLQVFFVESICDDPRIIEQNIMEVKVSSPDYTNI-QNTDNVLNDFML 636
P + ++P Q Q SI ++P+ +V P Y ++ Q ++ N +
Sbjct: 775 PPVNQQQPIYQQPAPQYPPYNSIQNNPQHGPSPFNYSQVPQPAYNHVGQQPSHMSNQPHI 834
Query: 637 RIEHYQEKYEPLDESLESEYSFMEDIRYRREGGRSQARRAHTSR 768
YQ Y P S+ ++ + ++ G RS H+S+
Sbjct: 835 NQNGYQNSYNPNQGPTSSDPNYGCNPQFNHYGSRSVYHEDHSSQ 878
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 481 PCSPQDGLQVFFV-ESICDDPRIIEQNIMEVKVSSPDYTNIQNTDNVLNDFMLRIEHYQE 657
P P + +V FV E+I P I + + + S D+T + +V + + +E
Sbjct: 63 PQYPFNSPEVMFVGETIPAHPHIYSNGHICLSILSDDWTPALSVQSVCLSILSMLSSSKE 122
Query: 658 KYEPLDESL 684
K P+D+++
Sbjct: 123 KKHPIDDAI 131
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,660,040
Number of Sequences: 27780
Number of extensions: 459901
Number of successful extensions: 1442
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1432
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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