Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021240
         (659 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    27   0.52 
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          26   1.2  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    25   2.1  
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          23   8.5  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          23   8.5  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          23   8.5  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          23   8.5  

>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 27.1 bits (57), Expect = 0.52
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -2

Query: 103 ATSSVMPNSFKASEYVSAAAGKQQYA 26
           +T++ + NSFK+ ++ SAAA    YA
Sbjct: 592 STAAAVANSFKSEQFSSAAAAVANYA 617


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 443 GRHSLHVATAQEDLAYAHYVLETLRD 520
           G + LH+A   + L   HY+LE +++
Sbjct: 885 GNNILHIAVDNDALDIVHYILEEVKE 910


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +2

Query: 392 HSVAVYEEALAALSAAFGRHSLHVATAQEDL 484
           H+ A+ EEA+AA++    +H L +A  + +L
Sbjct: 682 HAAAIAEEAVAAVNNWMVQHKLSLAPEKTEL 712


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -2

Query: 196 PSISHGFVMSPSVCEATSQVS-ATLNE 119
           PSI+  F +SP  C+  +Q S  TL E
Sbjct: 46  PSIADVFAVSPFYCQTQNQFSDDTLKE 72


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -2

Query: 196 PSISHGFVMSPSVCEATSQVS-ATLNE 119
           PSI+  F +SP  C+  +Q S  TL E
Sbjct: 46  PSIADVFAVSPFYCQTQNQFSDDTLKE 72


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -2

Query: 196 PSISHGFVMSPSVCEATSQVS-ATLNE 119
           PSI+  F +SP  C+  +Q S  TL E
Sbjct: 46  PSIADVFAVSPFYCQTQNQFSDDTLKE 72


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -2

Query: 196 PSISHGFVMSPSVCEATSQVS-ATLNE 119
           PSI+  F +SP  C+  +Q S  TL E
Sbjct: 46  PSIADVFAVSPFYCQTQNQFSDDTLKE 72


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 529,881
Number of Sequences: 2352
Number of extensions: 7847
Number of successful extensions: 23
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)