Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021239
(788 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC338.07c |||NatA N-acetyltransferase complex subunit |Schizos... 99 6e-22
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 48 1e-06
SPAC30D11.11 |||Haemolysin-III family protein|Schizosaccharomyce... 33 0.062
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 31 0.19
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 30 0.33
SPBC24C6.05 |sec28||coatomer epsilon subunit |Schizosaccharomyce... 30 0.43
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 30 0.43
SPBC83.05 |||mitochondrial RNA-binding protein |Schizosaccharomy... 29 0.57
SPAC6F12.15c |cut9|dre1|anaphase-promoting complex subunit Cut9|... 29 1.0
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 28 1.3
SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharom... 28 1.8
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 27 2.3
SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27 family|Schi... 27 4.0
SPBC1271.02 |stt3||oligosaccharyltransferase subunit Stt3|Schizo... 27 4.0
SPCC364.05 |vps3||GTPase regulator Vps3 |Schizosaccharomyces pom... 27 4.0
SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual 26 5.4
SPAC823.07 |||GPI-phospholipase A2 activity regulator |Schizosac... 26 7.1
SPAC8C9.06c |||mitochondrial translation regulator |Schizosaccha... 26 7.1
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 26 7.1
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 25 9.4
>SPCC338.07c |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 729
Score = 99.1 bits (236), Expect = 6e-22
Identities = 46/82 (56%), Positives = 56/82 (68%)
Frame = +1
Query: 256 LGRKDEAYDYVRRGLRNDLKSPVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKENIQILR 435
LG E YD VR GLRND+ S VCWH++GL+ R+DK Y +A KCY NA K EK N +LR
Sbjct: 57 LGNTKEGYDNVRLGLRNDVGSGVCWHIFGLISRADKDYVQAAKCYINAHKLEKNNSSLLR 116
Query: 436 DLSLLQIQMRDLEGYKDTRYQL 501
DL+LLQ Q+R + DTR L
Sbjct: 117 DLALLQSQLRQYKALADTRNAL 138
Score = 64.1 bits (149), Expect = 2e-11
Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Frame = +3
Query: 402 KMGKGEYSNSQRFVTITNSDERFRGL*RYQISAFHARPTQRASWIGFAMSYHLLGDYEMA 581
K+ K S + + + +++ L + + P RA+W A++ L G+Y A
Sbjct: 106 KLEKNNSSLLRDLALLQSQLRQYKALADTRNALLQDNPGVRANWSALAVAQFLRGEYASA 165
Query: 582 NSILDAFRTHQMKG-PYD-YEHSELLLYQNMVLAESGQYERALQHLQKFESQILDKLSVK 755
I+DAF + +G P D E SE +L+ N+V+ + E A +HL E ++LD+++
Sbjct: 166 YKIVDAFESTINQGVPVDTQEESEAMLFMNLVILKKDGVEDAYKHLLSIEKKVLDRVAFL 225
Query: 756 ETLGEYYLKLN 788
ET EY L L+
Sbjct: 226 ETRAEYELYLS 236
Score = 58.0 bits (134), Expect = 1e-09
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +2
Query: 98 LPPKENALFKRILRCYEHKQYKNGLKFAKQILSNPKFAEHGETLAMKGLTLNS 256
L PKE LF+ L+CYE KQYK GLK + +L + EHGE+LA+KG+ L+S
Sbjct: 6 LSPKEITLFRTALKCYETKQYKKGLKAIEPLLE--RHPEHGESLAIKGILLHS 56
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 48.4 bits (110), Expect = 1e-06
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +1
Query: 307 DLKSPVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKENIQILRDLSLLQIQM 462
D KS CWH ++ R K Y+ ++KCY+NAL N + D + LQ Q+
Sbjct: 72 DPKSQFCWHALAIVYRETKDYNNSLKCYQNALAISPNNESLWYDAAYLQAQL 123
>SPAC30D11.11 |||Haemolysin-III family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 32.7 bits (71), Expect = 0.062
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 319 PVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKENIQILRDLS 444
PV WH + R + Y KC+R+ L W E I LS
Sbjct: 175 PVQWHNNPYIIRGYRFYTSKRKCFRSILSWHNETFNIWTHLS 216
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 31.1 bits (67), Expect = 0.19
Identities = 19/87 (21%), Positives = 39/87 (44%)
Frame = +1
Query: 226 LSHERSNIKFLGRKDEAYDYVRRGLRNDLKSPVCWHVYGLLQRSDKKYDEAIKCYRNALK 405
L H++S+ +D A Y+ + L D W++ G + +KY++A + Y+ A+
Sbjct: 555 LCHQQSSS--FTNQDLAIQYLTKSLEADDTDAQSWYLIGRCYVAQQKYNKAYEAYQQAVY 612
Query: 406 WEKENIQILRDLSLLQIQMRDLEGYKD 486
+ N + +L Q+ + D
Sbjct: 613 RDGRNPTFWCSIGVLYYQINQYQDALD 639
>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1389
Score = 30.3 bits (65), Expect = 0.33
Identities = 16/67 (23%), Positives = 33/67 (49%)
Frame = +1
Query: 274 AYDYVRRGLRNDLKSPVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKENIQILRDLSLLQ 453
A + +++ ++ + K+ V W++ G+L K A CY +L + + + + L
Sbjct: 915 AINCIKQAIKLEAKNYVFWNMLGVLFSQTKAVRSAQHCYIQSLLLNERSSGVWANYGALC 974
Query: 454 IQMRDLE 474
IQ D+E
Sbjct: 975 IQNHDVE 981
>SPBC24C6.05 |sec28||coatomer epsilon subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 288
Score = 29.9 bits (64), Expect = 0.43
Identities = 21/79 (26%), Positives = 35/79 (44%)
Frame = +1
Query: 259 GRKDEAYDYVRRGLRNDLKSPVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKENIQILRD 438
G D+A D +++ + N V VY + + K + A + + AL W E I +
Sbjct: 110 GSFDDAMDLLKKSVEN--LEAVALQVY--IHLREHKIEAAEQTLKQALDWADEEIVLQLA 165
Query: 439 LSLLQIQMRDLEGYKDTRY 495
S ++I +E Y D Y
Sbjct: 166 QSWIKIVSGGVESYNDAFY 184
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 29.9 bits (64), Expect = 0.43
Identities = 11/65 (16%), Positives = 34/65 (52%)
Frame = +1
Query: 268 DEAYDYVRRGLRNDLKSPVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKENIQILRDLSL 447
+ + D R+ L+++ + + W+ G + +K EA+ Y A+ + + +++ ++++
Sbjct: 455 ERSADCFRQALQDEPSNEILWNKLGAALTNAEKNTEAVSSYNRAVSLQPQYVRVRSNMAV 514
Query: 448 LQIQM 462
I +
Sbjct: 515 SNINL 519
>SPBC83.05 |||mitochondrial RNA-binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 29.5 bits (63), Expect = 0.57
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +1
Query: 394 NALKWEKENIQILRDLSLLQIQMRDLEGYKDTRYQ 498
NA+K +++ +Q+L+DL L+ ++D Y TR Q
Sbjct: 715 NAIKNDEQELQMLKDLGNLESGVKDRAHYLTTRIQ 749
>SPAC6F12.15c |cut9|dre1|anaphase-promoting complex subunit
Cut9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 671
Score = 28.7 bits (61), Expect = 1.0
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Frame = +3
Query: 483 RYQISAFHARPTQRASWIGFAMSYHLLGDYEMA-NSILDAFRTHQ-MKGPYDYEHSELLL 656
RY + P +WIGFA S+ + G+++ A ++ A R Q PY + + +
Sbjct: 394 RYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQ 453
Query: 657 YQNMVLAESGQYERALQHLQKFESQILDKLSV 752
N++LA +Y ++ L +++ +L++L V
Sbjct: 454 LGNILLA--NEYLQSSYALFQYDPLLLNELGV 483
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 28.3 bits (60), Expect = 1.3
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 376 AIKCYRNALKWEKENIQILRDLSLLQIQMRDLE 474
A+K +++ +EN+Q+ R L +LQ + +DLE
Sbjct: 1917 ALKTQKDSNNHREENLQLHRQLGVLQKEKKDLE 1949
>SPBC947.12 |kms2||spindle pole body protein
Kms2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 457
Score = 27.9 bits (59), Expect = 1.8
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 343 LLQRSDKKYDEAIKCYRNALKWEKENIQILRDLSLLQIQMRDL 471
LL+ D + CY A WEK+ + LRD Q++ +
Sbjct: 201 LLEELDSSEEACKSCYTQAKTWEKKFREALRDSKEYAAQLQTI 243
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/54 (24%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +1
Query: 328 WHVYGLLQRSDKKYDEAIKCYRNALKWEK-ENIQILRDLSLLQIQMRDLEGYKD 486
++ +G + +K+D+A+K + +A++ EK E++ I+ + L+ + + KD
Sbjct: 486 YNYFGEILLDQQKFDDAVKNFDHAIELEKREHLTIMSAMPLINKALAVFQWKKD 539
>SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 817
Score = 26.6 bits (56), Expect = 4.0
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = +1
Query: 304 NDLKSPVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKENIQILRDLSLLQIQMRD 468
N L P W YG +KYD A++ + L E+ + +L+ ++ +D
Sbjct: 551 NPLSYPT-WFTYGCAALELQKYDAAMEAFSRCLSINPEDGESWNNLASAMLKAKD 604
>SPBC1271.02 |stt3||oligosaccharyltransferase subunit
Stt3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 752
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 687 VLIRPVPYSGIIAIRSVHNHMDLSSDECGM 598
VL+ P +SGI AI + + +L SD CG+
Sbjct: 123 VLLAPA-FSGITAIATYYLARELKSDACGL 151
>SPCC364.05 |vps3||GTPase regulator Vps3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 910
Score = 26.6 bits (56), Expect = 4.0
Identities = 24/80 (30%), Positives = 35/80 (43%)
Frame = +3
Query: 540 FAMSYHLLGDYEMANSILDAFRTHQMKGPYDYEHSELLLYQNMVLAESGQYERALQHLQK 719
+ M L +Y+ SI + + Q EHS LLLY NM +G + A + L+
Sbjct: 481 YIMLMRYLKNYKKNTSISEYLLSSQRDVMLAVEHSLLLLYLNMDDLAAGT-KNAKELLES 539
Query: 720 FESQILDKLSVKETLGEYYL 779
+ + D V EYYL
Sbjct: 540 GLTGVEDIKDVLIQKKEYYL 559
>SPBC839.08c |its8||pig-N |Schizosaccharomyces pombe|chr 2|||Manual
Length = 935
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +3
Query: 657 YQNMVLA--ESGQYERALQHLQKFESQILDKL 746
+ N V+A ESG+YE A++H F +L L
Sbjct: 406 FYNSVIADIESGEYEIAIEHCFHFSQTVLSGL 437
>SPAC823.07 |||GPI-phospholipase A2 activity regulator
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 331
Score = 25.8 bits (54), Expect = 7.1
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 637 NTPNCYYTRIWYWPNQDNMRELYSIYRSLKVKFWINY 747
N P+ Y WY+ ++EL+S++ S+ + F I+Y
Sbjct: 86 NLPSQQYHGKWYFIRVFGIQELFSVFFSM-LNFMIHY 121
>SPAC8C9.06c |||mitochondrial translation regulator
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 931
Score = 25.8 bits (54), Expect = 7.1
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -3
Query: 273 LILAT*EFNVRPFMAKVSPCSANFGLDNICLANFNPFLYC 154
L+L ++ PF+ KV C + LDN + PF +C
Sbjct: 113 LLLPFFTLDLLPFLNKVCECCNHMLLDNPKIKQDLPFAFC 152
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 25.8 bits (54), Expect = 7.1
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -2
Query: 715 CKCCKALSYCPDSASTIFWYN 653
C C K+ +Y D S + WY+
Sbjct: 287 CNCVKSFTYHSDKVSCLDWYS 307
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 25.4 bits (53), Expect = 9.4
Identities = 18/76 (23%), Positives = 40/76 (52%)
Frame = +1
Query: 262 RKDEAYDYVRRGLRNDLKSPVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKENIQILRDL 441
R++EA+++ R+ + +DL+ Y L++ + + D + R AL+ E N++ R+
Sbjct: 82 RREEAFNFQRKSMVDDLRERE-RQFYDSLEKKENERDRLQEKLR-ALQEESANLRRQREN 139
Query: 442 SLLQIQMRDLEGYKDT 489
L + Q + ++T
Sbjct: 140 RLREEQEQSKRRKQET 155
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,370,336
Number of Sequences: 5004
Number of extensions: 74122
Number of successful extensions: 252
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 250
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 383374054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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