Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021239
         (788 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    26   1.2  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   4.7  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   4.7  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   8.1  

>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 643 PNCYYTRIWYWPNQDNMRELYSI 711
           P+  Y R+W WP+  +  EL  I
Sbjct: 98  PHVIYCRVWRWPDLQSHHELKPI 120


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 529  DALCVGLA*KADIWYLYNPLNLSSEFVIVTNL 434
            +AL  G+A     W L NP +L S FV +T++
Sbjct: 2845 NALMNGVA--TSSWILMNPSSLISSFVSITSV 2874


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 643 PNCYYTRIWYWPN 681
           P+  Y RIW WP+
Sbjct: 90  PHVIYARIWRWPD 102


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 225 VSPCSANFGLDNICLANFNPF 163
           ++P  +NF L   CL NF+ F
Sbjct: 572 IAPLISNFFLAAYCLVNFSTF 592


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 851,009
Number of Sequences: 2352
Number of extensions: 18765
Number of successful extensions: 69
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)