Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021239
         (788 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024801-3|AAK68511.3|  852|Caenorhabditis elegans Hypothetical ...   117   1e-26
Z92822-9|CAL49448.1|  576|Caenorhabditis elegans Hypothetical pr...    33   0.23 
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr...    33   0.23 
Z82094-5|CAL49446.1|  576|Caenorhabditis elegans Hypothetical pr...    33   0.23 
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr...    33   0.23 
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.      33   0.23 
Z22179-14|CAI06052.1|  443|Caenorhabditis elegans Hypothetical p...    29   3.8  
AC024845-1|AAF60850.2|  347|Caenorhabditis elegans Hypothetical ...    29   3.8  
Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical p...    29   5.0  
AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical ...    29   5.0  
AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical ...    29   5.0  
U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical pr...    28   6.6  
U34902-1|AAA97607.1|  393|Caenorhabditis elegans sma-3 protein.        28   8.8  
U00046-9|AAC47050.2|  393|Caenorhabditis elegans Small protein 3...    28   8.8  
AF039049-3|AAB94251.2|  298|Caenorhabditis elegans Serpentine re...    28   8.8  

>AC024801-3|AAK68511.3|  852|Caenorhabditis elegans Hypothetical
           protein Y50D7A.4 protein.
          Length = 852

 Score =  117 bits (281), Expect = 1e-26
 Identities = 55/111 (49%), Positives = 77/111 (69%)
 Frame = +1

Query: 169 VKIRQTDIIQPKVRGAWRNLSHERSNIKFLGRKDEAYDYVRRGLRNDLKSPVCWHVYGLL 348
           +K  Q  +  P        L+ +   +  +G+  EA D VRRGL +DL+S VCWHV+GL+
Sbjct: 37  LKFAQKILTSPGFAEHGETLAMKGLILNCMGKLQEAQDCVRRGLVSDLRSYVCWHVFGLI 96

Query: 349 QRSDKKYDEAIKCYRNALKWEKENIQILRDLSLLQIQMRDLEGYKDTRYQL 501
           Q+++KKYDEAIK Y+ AL  EK+N+QILRDLSLLQI +RD +GY  ++Y+L
Sbjct: 97  QKTEKKYDEAIKAYKRALMLEKDNLQILRDLSLLQIHIRDYDGYLSSKYEL 147



 Score = 83.0 bits (196), Expect = 2e-16
 Identities = 38/55 (69%), Positives = 45/55 (81%)
 Frame = +2

Query: 89  SNPLPPKENALFKRILRCYEHKQYKNGLKFAKQILSNPKFAEHGETLAMKGLTLN 253
           S PLP KE   FK+I++ YE KQYK GLKFA++IL++P FAEHGETLAMKGL LN
Sbjct: 10  SQPLPAKELGYFKKIVKSYEQKQYKAGLKFAQKILTSPGFAEHGETLAMKGLILN 64



 Score = 77.0 bits (181), Expect = 1e-14
 Identities = 34/92 (36%), Positives = 59/92 (64%)
 Frame = +3

Query: 510 RPTQRASWIGFAMSYHLLGDYEMANSILDAFRTHQMKGPYDYEHSELLLYQNMVLAESGQ 689
           R TQR SW+G+ +++HLL ++ +A  I+  +  +     YD+E SEL+LYQN+++ E+G 
Sbjct: 151 RQTQRVSWLGYIVAHHLLKEHNLALGIMAEYIKNNTPSGYDFEFSELILYQNLIMREAGL 210

Query: 690 YERALQHLQKFESQILDKLSVKETLGEYYLKL 785
            + ALQ L++  + I+DK++  ET     + L
Sbjct: 211 PDVALQKLEENSTHIVDKVAYMETRANLLMDL 242


>Z92822-9|CAL49448.1|  576|Caenorhabditis elegans Hypothetical
           protein ZK520.3b protein.
          Length = 576

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +1

Query: 298 LRNDLKSPVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKENIQILRD 438
           L + +KSP     YG +   +KKY  A+KCY     ++ + +++L D
Sbjct: 126 LLDHVKSPKIHIQYGKIMEKEKKYKVAVKCYETGRDYDNQ-VRLLLD 171


>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical protein
            ZK520.3a protein.
          Length = 1383

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +1

Query: 298  LRNDLKSPVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKENIQILRD 438
            L + +KSP     YG +   +KKY  A+KCY     ++ + +++L D
Sbjct: 933  LLDHVKSPKIHIQYGKIMEKEKKYKVAVKCYETGRDYDNQ-VRLLLD 978


>Z82094-5|CAL49446.1|  576|Caenorhabditis elegans Hypothetical
           protein ZK520.3b protein.
          Length = 576

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +1

Query: 298 LRNDLKSPVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKENIQILRD 438
           L + +KSP     YG +   +KKY  A+KCY     ++ + +++L D
Sbjct: 126 LLDHVKSPKIHIQYGKIMEKEKKYKVAVKCYETGRDYDNQ-VRLLLD 171


>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical protein
            ZK520.3a protein.
          Length = 1383

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +1

Query: 298  LRNDLKSPVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKENIQILRD 438
            L + +KSP     YG +   +KKY  A+KCY     ++ + +++L D
Sbjct: 933  LLDHVKSPKIHIQYGKIMEKEKKYKVAVKCYETGRDYDNQ-VRLLLD 978


>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
          Length = 1383

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +1

Query: 298  LRNDLKSPVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKENIQILRD 438
            L + +KSP     YG +   +KKY  A+KCY     ++ + +++L D
Sbjct: 933  LLDHVKSPKIHIQYGKIMEKEKKYKVAVKCYETGRDYDNQ-VRLLLD 978


>Z22179-14|CAI06052.1|  443|Caenorhabditis elegans Hypothetical
           protein F58A4.14 protein.
          Length = 443

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 10/36 (27%), Positives = 23/36 (63%)
 Frame = +1

Query: 313 KSPVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKEN 420
           ++   +HV GL+ R++ + +EA++C+  A +   +N
Sbjct: 87  RNEAAFHVRGLIARNEGELEEAMECFHKAYELSGKN 122


>AC024845-1|AAF60850.2|  347|Caenorhabditis elegans Hypothetical
           protein Y65B4BL.3 protein.
          Length = 347

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 8/23 (34%), Positives = 18/23 (78%)
 Frame = -3

Query: 390 VTFYCLIIFLVRALQQPIHMPTY 322
           V + CL+++ +R++Q+ + +PTY
Sbjct: 39  VKYICLLVYCIRSMQEHLSVPTY 61


>Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical
           protein C24F3.5 protein.
          Length = 1479

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
 Frame = -3

Query: 723 QTSVNAVKLSHIVLIRPVPYSGIIAI-RSVHNHMDLSSDECGMHLGYCLPFHNHRGDGSS 547
           +TS  +  +    +++ VP   +  I + + NH  +      +HLG  +  + H G GS 
Sbjct: 375 KTSTGSKYIPPTPIVKGVPLVVLYGICKRIENHWRVKQVSLTVHLGEVVTLYGHHGCGSG 434

Query: 546 *QILSMM 526
            +ILS++
Sbjct: 435 -EILSII 440


>AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical
           protein C24F3.5 protein.
          Length = 1479

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
 Frame = -3

Query: 723 QTSVNAVKLSHIVLIRPVPYSGIIAI-RSVHNHMDLSSDECGMHLGYCLPFHNHRGDGSS 547
           +TS  +  +    +++ VP   +  I + + NH  +      +HLG  +  + H G GS 
Sbjct: 375 KTSTGSKYIPPTPIVKGVPLVVLYGICKRIENHWRVKQVSLTVHLGEVVTLYGHHGCGSG 434

Query: 546 *QILSMM 526
            +ILS++
Sbjct: 435 -EILSII 440


>AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical
           protein C24F3.5 protein.
          Length = 1479

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
 Frame = -3

Query: 723 QTSVNAVKLSHIVLIRPVPYSGIIAI-RSVHNHMDLSSDECGMHLGYCLPFHNHRGDGSS 547
           +TS  +  +    +++ VP   +  I + + NH  +      +HLG  +  + H G GS 
Sbjct: 375 KTSTGSKYIPPTPIVKGVPLVVLYGICKRIENHWRVKQVSLTVHLGEVVTLYGHHGCGSG 434

Query: 546 *QILSMM 526
            +ILS++
Sbjct: 435 -EILSII 440


>U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical protein
            ZK328.7a protein.
          Length = 1332

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = +1

Query: 262  RKDEAYDYVRRGLRNDLKSPVCWHVYGLLQRSDKKYDEAIKCYRNALKWEKE 417
            + D+A  ++    + +      + +YG ++  ++KY EA K Y  A    KE
Sbjct: 1228 KNDQAVTFLDLVFKYNCNCLKAFELYGYMREKEQKYVEAYKMYEKAFMATKE 1279


>U34902-1|AAA97607.1|  393|Caenorhabditis elegans sma-3 protein.
          Length = 393

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 643 PNCYYTRIWYWPNQDNMRELYSI 711
           P+  Y R+W WP+  +  EL SI
Sbjct: 85  PHVIYCRVWRWPDISSPHELRSI 107


>U00046-9|AAC47050.2|  393|Caenorhabditis elegans Small protein 3
           protein.
          Length = 393

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 643 PNCYYTRIWYWPNQDNMRELYSI 711
           P+  Y R+W WP+  +  EL SI
Sbjct: 85  PHVIYCRVWRWPDISSPHELRSI 107


>AF039049-3|AAB94251.2|  298|Caenorhabditis elegans Serpentine
           receptor, class x protein66 protein.
          Length = 298

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 641 VFIIIWTFHLMSAECI*DTVCHFIITEEM 555
           +  I+W F L  A C  + +CHF   E++
Sbjct: 123 MIFILWMFELTFALCFYEYLCHFYFDEKI 151


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,404,000
Number of Sequences: 27780
Number of extensions: 410841
Number of successful extensions: 1003
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)