Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021239
(788 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g80410.1 68414.m09413 acetyltransferase-related low similarit... 124 5e-29
At3g23160.1 68416.m02919 expressed protein contains Pfam domain ... 32 0.50
At2g06210.2 68415.m00683 phosphoprotein-related low similarity t... 31 0.66
At2g06210.1 68415.m00684 phosphoprotein-related low similarity t... 31 0.66
At4g37460.1 68417.m05302 tetratricopeptide repeat (TPR)-containi... 31 1.2
At5g63200.1 68418.m07935 tetratricopeptide repeat (TPR)-containi... 29 2.7
At2g31290.1 68415.m03820 expressed protein 29 4.6
At4g37440.1 68417.m05299 expressed protein 28 6.1
At1g21240.1 68414.m02654 wall-associated kinase, putative simila... 28 8.1
>At1g80410.1 68414.m09413 acetyltransferase-related low similarity
to acetyltransferase Tubedown-1 [Mus musculus]
GI:8497318, N-TERMINAL ACETYLTRANSFERASE GB:P12945 from
(Saccharomyces cerevisiae); contains Pfam profile
PF00515 TPR Domain
Length = 897
Score = 124 bits (300), Expect = 5e-29
Identities = 59/109 (54%), Positives = 77/109 (70%)
Frame = +1
Query: 175 IRQTDIIQPKVRGAWRNLSHERSNIKFLGRKDEAYDYVRRGLRNDLKSPVCWHVYGLLQR 354
++ D I K LS + + + RK EAY+ VR G++ND+KS VCWHV GLL R
Sbjct: 29 LKAADAILKKFPDHGETLSMKGLTLNCMDRKTEAYELVRLGVKNDIKSHVCWHVLGLLYR 88
Query: 355 SDKKYDEAIKCYRNALKWEKENIQILRDLSLLQIQMRDLEGYKDTRYQL 501
SD++Y EAIKCYRNAL+ + +N++ILRDLSLLQ QMRDL G+ +TR QL
Sbjct: 89 SDREYREAIKCYRNALRIDPDNLEILRDLSLLQAQMRDLSGFVETRQQL 137
Score = 68.9 bits (161), Expect = 4e-12
Identities = 35/52 (67%), Positives = 39/52 (75%)
Frame = +2
Query: 98 LPPKENALFKRILRCYEHKQYKNGLKFAKQILSNPKFAEHGETLAMKGLTLN 253
LPPKE LFK I++ YE KQYK GLK A IL KF +HGETL+MKGLTLN
Sbjct: 5 LPPKEANLFKLIVKSYETKQYKKGLKAADAILK--KFPDHGETLSMKGLTLN 54
Score = 68.9 bits (161), Expect = 4e-12
Identities = 37/87 (42%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
Frame = +3
Query: 510 RPTQRASWIGFAMSYHLLGDYEMANSILDAFR-THQMKGPYD---YEHSELLLYQNMVLA 677
+P R +WIGFA+S HL + A IL+A+ T + P + EH+E++LY+ +L
Sbjct: 141 KPNHRMNWIGFAVSQHLNANASKAVEILEAYEGTLEDDYPPENELIEHTEMILYKVSLLE 200
Query: 678 ESGQYERALQHLQKFESQILDKLSVKE 758
ESG +++AL+ L K E +I+DKLS KE
Sbjct: 201 ESGSFDKALEELHKKEPKIVDKLSYKE 227
>At3g23160.1 68416.m02919 expressed protein contains Pfam domain
PF05003: protein of unknown function (DUF668);
expression supported by MPSS
Length = 522
Score = 31.9 bits (69), Expect = 0.50
Identities = 13/34 (38%), Positives = 25/34 (73%)
Frame = +1
Query: 346 LQRSDKKYDEAIKCYRNALKWEKENIQILRDLSL 447
LQRS +++ E++K + L W++++++ LRD SL
Sbjct: 176 LQRS-QQHQESVKAFEQKLMWQRQDVKSLRDGSL 208
>At2g06210.2 68415.m00683 phosphoprotein-related low similarity to
phosphoprotein from Mus musculus GI:1236239; contains
Pfam profile PF00515 TPR Domain
Length = 852
Score = 31.5 bits (68), Expect = 0.66
Identities = 23/91 (25%), Positives = 38/91 (41%)
Frame = +3
Query: 513 PTQRASWIGFAMSYHLLGDYEMANSILDAFRTHQMKGPYDYEHSELLLYQNMVLAESGQY 692
PT+ S+ A SYH GD+E A A P+++ L Q V + G+
Sbjct: 63 PTKSHSFYNLARSYHSKGDFEKAGMYYMAAIKETNNNPHEFVFPYFGLGQ--VQLKLGEL 120
Query: 693 ERALQHLQKFESQILDKLSVKETLGEYYLKL 785
+ ++ + +K D + LG Y +L
Sbjct: 121 KGSVFNFEKVLEVYPDNCETLKALGHLYTQL 151
>At2g06210.1 68415.m00684 phosphoprotein-related low similarity to
phosphoprotein from Mus musculus GI:1236239; contains
Pfam profile PF00515 TPR Domain
Length = 1064
Score = 31.5 bits (68), Expect = 0.66
Identities = 23/91 (25%), Positives = 38/91 (41%)
Frame = +3
Query: 513 PTQRASWIGFAMSYHLLGDYEMANSILDAFRTHQMKGPYDYEHSELLLYQNMVLAESGQY 692
PT+ S+ A SYH GD+E A A P+++ L Q V + G+
Sbjct: 275 PTKSHSFYNLARSYHSKGDFEKAGMYYMAAIKETNNNPHEFVFPYFGLGQ--VQLKLGEL 332
Query: 693 ERALQHLQKFESQILDKLSVKETLGEYYLKL 785
+ ++ + +K D + LG Y +L
Sbjct: 333 KGSVFNFEKVLEVYPDNCETLKALGHLYTQL 363
>At4g37460.1 68417.m05302 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515: TPR Domain
Length = 883
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/74 (28%), Positives = 32/74 (43%)
Frame = +1
Query: 199 PKVRGAWRNLSHERSNIKFLGRKDEAYDYVRRGLRNDLKSPVCWHVYGLLQRSDKKYDEA 378
P AW+ R+ LG EA + + + L + SP H G++ K + A
Sbjct: 362 PAASEAWKRRGQARAA---LGEYVEAVEDLTKALVFEPNSPDVLHERGIVNFKSKDFTAA 418
Query: 379 IKCYRNALKWEKEN 420
+K LK EK+N
Sbjct: 419 VKDLSICLKQEKDN 432
>At5g63200.1 68418.m07935 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|P28290 Sperm-specific
antigen 2 (Cleavage signal-1 protein) (CS-1) Homo
sapiens; contains Pfam profile PF00515: TPR Domain
Length = 649
Score = 29.5 bits (63), Expect = 2.7
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +3
Query: 492 ISAFHARPTQRASWIGFAMSYHLLGDYEMANSILD 596
++A + P +W+ A SY+++GD+ ++ L+
Sbjct: 344 LAALRSDPKSAHAWVNLANSYYMMGDHRSSSKCLE 378
>At2g31290.1 68415.m03820 expressed protein
Length = 415
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 190 IIQPKVRGAWRNLSHERSNIKFLGRKDEAYDYVRRGLRNDLKSPVCWHVY 339
I+ +++ ++ ++IKFL +K + D + L K P C+HVY
Sbjct: 45 IVNSRLKNIILRCPNQVASIKFLQKKFKTLDLQGKALNWLKKYPCCFHVY 94
>At4g37440.1 68417.m05299 expressed protein
Length = 471
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 262 RKDEAYDYVRRGLRNDLKSPVCWHV--YGLLQRSDKKYDEAIKCYRNALKWEKENIQ 426
RK + D+ RR ++ L W Y LQ +KYD+ ++ Y A K E EN++
Sbjct: 128 RKRKLTDHWRRFVQPTLMWRCKWIELKYKELQNQAQKYDKEVEEYYQAKKLELENVK 184
>At1g21240.1 68414.m02654 wall-associated kinase, putative similar
to wall-associated kinase 1 [Arabidopsis thaliana]
GI:3549626; expressed in leaves and stems & induced by
salicylic acid or INA (PMID:10380805)
Length = 741
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +2
Query: 113 NALFKRILRCYEHKQYKNGLKFAKQILSNPKFAEHGE--TLAMKGLTLNS*VARMRHMTM 286
+ LF+R CYE K NG Q+ S+ + + + + L+L S + + T
Sbjct: 86 SVLFERFSECYEQKNETNGTALGYQLGSSFSLSSNNKFTLVGCNALSLLSTFGKQNYSTG 145
Query: 287 YAEVYVMI*SPQYVGMC--MGCCS 352
+ P+ G C +GCC+
Sbjct: 146 CLSLCNS--QPEANGRCNGVGCCT 167
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,225,486
Number of Sequences: 28952
Number of extensions: 378211
Number of successful extensions: 1059
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1775300800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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