Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021238
         (743 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450 pr...    25   3.3  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   5.7  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   7.5  

>AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450
           protein.
          Length = 492

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 394 YNYDSSHSADVWTSAAVVVEVPAQTCPSRSAHR 296
           YN+ ++  A V  + A VV  P    P R  HR
Sbjct: 459 YNFQATTPAKVKFAVATVVVTPEDGFPMRVEHR 491


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -2

Query: 412 DSPRNYYNYDSSHSADVWTSAAVVVE 335
           D+P NY+N D++ S     SAA VVE
Sbjct: 10  DNP-NYFNEDAAASGPSGESAADVVE 34


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 321  PVPLAPRTAPPSRACTRI 268
            P P AP  + PSR+  RI
Sbjct: 1312 PAPAAPSNSTPSRSVARI 1329


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 528,510
Number of Sequences: 2352
Number of extensions: 8062
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)