Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021238
         (743 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73970-3|CAA98242.2|  773|Caenorhabditis elegans Hypothetical pr...   109   2e-24
Z83113-3|CAB05545.1|  479|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z48582-1|CAA88465.1|  490|Caenorhabditis elegans Hypothetical pr...    29   2.6  
AC024204-1|AAF36040.3|  414|Caenorhabditis elegans Hypothetical ...    29   2.6  
Z93386-5|CAB07646.1|  473|Caenorhabditis elegans Hypothetical pr...    28   6.1  
AL032630-3|CAA21560.1|  214|Caenorhabditis elegans Hypothetical ...    28   8.0  
AL031633-3|CAD56609.1|  545|Caenorhabditis elegans Hypothetical ...    28   8.0  

>Z73970-3|CAA98242.2|  773|Caenorhabditis elegans Hypothetical
           protein C29A12.3a protein.
          Length = 773

 Score =  109 bits (262), Expect = 2e-24
 Identities = 45/76 (59%), Positives = 63/76 (82%)
 Frame = -3

Query: 738 FLEEAVKESCEGLMVKMLTGDNSKYDIARRSHNWLKLKQDYLEGVGDTVDAVIIGAYRGK 559
           F +EAV+  CEGLM+K L  + + Y+I+RRSH+WLK+K+DY++GVGDT+D V++GAY G 
Sbjct: 429 FFDEAVQNKCEGLMIKTLDTE-ATYEISRRSHSWLKMKKDYVDGVGDTLDLVVMGAYSGV 487

Query: 558 GKRAGVYGGFLVACYD 511
           GKR GVYGG+L+ CY+
Sbjct: 488 GKRTGVYGGYLLGCYN 503



 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 32/89 (35%), Positives = 48/89 (53%)
 Frame = -2

Query: 511 PESEQFQSLCKLGTGFSDEDLQALSDMLKEHIIDSPRNYYNYDSSHSADVWTSAAVVVEV 332
           P +E+++S+CK+GTGF+DEDL     +L++  ID   +YY +D +   D   S  +V EV
Sbjct: 504 PTTEEYESVCKIGTGFTDEDLAEQYKILQDKKIDKSPSYYQFDHTLKPDDTFSPYLVFEV 563

Query: 331 PAQTCPSRSAHRAAIARLHPHKGVSLASP 245
                     H+AA       KG+SL  P
Sbjct: 564 KCADITISPRHKAASGLTDDGKGISLRFP 592


>Z83113-3|CAB05545.1|  479|Caenorhabditis elegans Hypothetical
           protein K08H10.6 protein.
          Length = 479

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 14/43 (32%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
 Frame = -2

Query: 469 GFSDEDLQALSDMLKEHIIDSPRNYYNYD--SSHSADVWTSAA 347
           G+    +  LS++L++ I+D+ +N Y+Y+  SS  + +W+S A
Sbjct: 36  GYLISAVNPLSEILQQFIVDNLQNRYSYELSSSQLSLIWSSLA 78


>Z48582-1|CAA88465.1|  490|Caenorhabditis elegans Hypothetical
           protein F27E5.3 protein.
          Length = 490

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +2

Query: 656 AISYFELSPVSIFTMSPSQLSFTASSRNS 742
           AIS+ +LSP ++ T  PS +  T SS NS
Sbjct: 280 AISFSKLSPSTVTTSGPSTVDTTGSSGNS 308


>AC024204-1|AAF36040.3|  414|Caenorhabditis elegans Hypothetical
           protein Y73B6A.1 protein.
          Length = 414

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 23/71 (32%), Positives = 28/71 (39%)
 Frame = -2

Query: 478 LGTGFSDEDLQALSDMLKEHIIDSPRNYYNYDSSHSADVWTSAAVVVEVPAQTCPSRSAH 299
           +G GFS   L AL  +  + II  PR      SS  A    +AA    VP  T      H
Sbjct: 60  IGKGFSRYILSALQKLESQKIIFQPRKQRFKLSSIRAQAGRAAAPTPVVPKTTKGRNDVH 119

Query: 298 RAAIARLHPHK 266
               AR   H+
Sbjct: 120 LKNNARRQVHR 130


>Z93386-5|CAB07646.1|  473|Caenorhabditis elegans Hypothetical
           protein R11H6.1 protein.
          Length = 473

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = -3

Query: 708 EGLMVKMLTGDNSKYDIARRSHNWLKLKQDYLEGVGDTVDAVIIGAYRGKGK 553
           E + ++ ++GD SK D   R  +W+K K   LE +G   +   +G    +GK
Sbjct: 25  EAVAIQSVSGDPSKRDETIRMVHWMKEK---LETIGTICELADLGTQELEGK 73


>AL032630-3|CAA21560.1|  214|Caenorhabditis elegans Hypothetical
           protein Y62H9A.3 protein.
          Length = 214

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -2

Query: 454 DLQALSDMLKEHIIDSPRNYYNYDSSHSA 368
           +++ L D+  E I+++   YY YD++H A
Sbjct: 104 EVKKLKDLRGEKIVEARVRYYTYDNTHYA 132


>AL031633-3|CAD56609.1|  545|Caenorhabditis elegans Hypothetical
           protein Y39A1A.5 protein.
          Length = 545

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = -2

Query: 469 GFSDEDLQALSDMLKEHIIDSPRN-YYNYDSSHSADVWTSAAVVVEVPAQTCPSRSAHRA 293
           G SD+DL+ +  ++KE +   P + Y N   S  A+   +A ++V +  Q+  S      
Sbjct: 448 GKSDDDLEKMLAVIKETVDFYPTDEYMNMKQSIFAEEKETADILVSLSRQSSESGRGTLT 507

Query: 292 AIARLHPHKGVSLASP 245
                 P    SL SP
Sbjct: 508 DTQPSTPQPDTSLESP 523


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,581,830
Number of Sequences: 27780
Number of extensions: 172857
Number of successful extensions: 631
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 630
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)