Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021237
         (765 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    23   2.7  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    23   3.5  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    23   3.5  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    23   3.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.2  

>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 692 VRKAKADGKCLIEALDAILPPARP 763
           +RK K+D    IEA DA+L   +P
Sbjct: 4   IRKMKSDLVLTIEASDAVLAYPQP 27


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 727 NEAFSVSFGLPYVPPAI 677
           NEAF    G+PY  P I
Sbjct: 23  NEAFFCFHGIPYAKPPI 39


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 727 NEAFSVSFGLPYVPPAI 677
           NEAF    G+PY  P I
Sbjct: 23  NEAFFCFHGIPYAKPPI 39


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 727 NEAFSVSFGLPYVPPAI 677
           NEAF    G+PY  P I
Sbjct: 22  NEAFFCFHGIPYAKPPI 38


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -3

Query: 640 CCLRAIQKWARKRQQLGCSQSS*CMRIL 557
           CC  A+      RQ +  S+   C+R +
Sbjct: 615 CCYHAVAPGTDIRQSIALSRKKKCIRYM 642


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -3

Query: 640 CCLRAIQKWARKRQQLGCSQSS*CMRIL 557
           CC  A+      RQ +  S+   C+R +
Sbjct: 507 CCYHAVAPGTDIRQSIALSRKKKCIRYM 534


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,380
Number of Sequences: 336
Number of extensions: 4272
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)