Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021236
         (839 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB6BF7 Cluster: PREDICTED: similar to CG1103-PA;...    59   2e-07
UniRef50_UPI00015B549B Cluster: PREDICTED: similar to conserved ...    55   2e-06
UniRef50_Q960K3 Cluster: LD47387p; n=4; Diptera|Rep: LD47387p - ...    38   0.24 
UniRef50_A2Z192 Cluster: Putative uncharacterized protein; n=3; ...    34   3.9  
UniRef50_A0H4C4 Cluster: Putative uncharacterized protein; n=1; ...    34   5.1  

>UniRef50_UPI0000DB6BF7 Cluster: PREDICTED: similar to CG1103-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to CG1103-PA
           - Apis mellifera
          Length = 261

 Score = 58.8 bits (136), Expect = 2e-07
 Identities = 26/49 (53%), Positives = 35/49 (71%)
 Frame = +3

Query: 516 SLGTTHWVDARARKTSFPLKTDGRINFGLFEGHRELNVTYGRRNYDISV 662
           +L T HWV+AR  +T  P ++ GR++FGL +G +ELNV YG R Y ISV
Sbjct: 27  ALVTQHWVEARPFRTPNPQESAGRVHFGLLQGKKELNVAYGWRTYHISV 75


>UniRef50_UPI00015B549B Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to conserved hypothetical protein -
           Nasonia vitripennis
          Length = 254

 Score = 55.2 bits (127), Expect = 2e-06
 Identities = 23/49 (46%), Positives = 33/49 (67%)
 Frame = +3

Query: 516 SLGTTHWVDARARKTSFPLKTDGRINFGLFEGHRELNVTYGRRNYDISV 662
           SL T HW++++  +   PL + GR+ FGL  G +ELNV +G R YDI+V
Sbjct: 53  SLVTNHWIESKPWRDKNPLDSSGRVYFGLLHGKKELNVAFGWRPYDITV 101


>UniRef50_Q960K3 Cluster: LD47387p; n=4; Diptera|Rep: LD47387p -
           Drosophila melanogaster (Fruit fly)
          Length = 230

 Score = 38.3 bits (85), Expect = 0.24
 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
 Frame = +3

Query: 516 SLGTTHWVDARARKTSFPLKTDGRINFGLFEGHRELNVTYGRRNYDIS----VKAGNHPA 683
           S+ T HWV A  R+ +      G  NFGLF G+  LN  +G R   +     V+  N   
Sbjct: 31  SMTTNHWVRATPRRKNSS-DAKGEFNFGLFFGNYHLNPGFGVRTNSVDVYTFVRTENDDT 89

Query: 684 RRWAW 698
             W W
Sbjct: 90  SFWLW 94



 Score = 35.5 bits (78), Expect = 1.7
 Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 5/36 (13%)
 Frame = +1

Query: 436 MKLNLFKRSMIFATFFGSCLCIAL-----TWDRWAR 528
           +K++L  R+++F+TFFGSCL I L     T + W R
Sbjct: 4   IKMSLHTRALVFSTFFGSCLAIGLLLVSMTTNHWVR 39


>UniRef50_A2Z192 Cluster: Putative uncharacterized protein; n=3;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 260

 Score = 34.3 bits (75), Expect = 3.9
 Identities = 18/52 (34%), Positives = 28/52 (53%)
 Frame = -1

Query: 749 RPARTEQGCTQQRRCTTPRPATSWVITGFHAYIIIPPAVSDVQLPVALEEAK 594
           RP         QRR    +P TS V+ G  ++ +IPP  S++ +PV L E++
Sbjct: 202 RPVAVAVAAAGQRRAPATKPKTSRVLYGGPSF-VIPPDPSELPIPVLLLESR 252


>UniRef50_A0H4C4 Cluster: Putative uncharacterized protein; n=1;
           Chloroflexus aggregans DSM 9485|Rep: Putative
           uncharacterized protein - Chloroflexus aggregans DSM
           9485
          Length = 226

 Score = 33.9 bits (74), Expect = 5.1
 Identities = 17/40 (42%), Positives = 25/40 (62%)
 Frame = -1

Query: 737 TEQGCTQQRRCTTPRPATSWVITGFHAYIIIPPAVSDVQL 618
           TEQG    RR TTP  +  ++ITGF ++I I  A++  +L
Sbjct: 84  TEQGIEFVRRFTTPETSVVYLITGFISFIPIVIAITSYRL 123


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 756,617,043
Number of Sequences: 1657284
Number of extensions: 14738800
Number of successful extensions: 39048
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 37413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39021
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 73373641369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)