SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021236
         (839 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    27   0.24 
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    24   1.7  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   2.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.0  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    22   5.3  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   5.3  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    22   5.3  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    22   5.3  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   7.0  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    22   7.0  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    22   7.0  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   7.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   7.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   7.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   7.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   7.0  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   7.0  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   7.0  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   9.2  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   9.2  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   9.2  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 26.6 bits (56), Expect = 0.24
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +2

Query: 656 KRESR*SPSSSLGVVWYSGAVGCSLALFGRVVCISGLGSAGPHEMFPQTSP 808
           KRE+   P+S++G+ W      C +      V +SGLGS    E+F +  P
Sbjct: 535 KRENYTLPASAVGIAWLYVDNDCCIRY---DVSLSGLGSDRRLELFLELLP 582


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 695 VVWYSGAVGCSLALFGRVV 751
           V WY+G V C +  F +VV
Sbjct: 88  VAWYAGNVACKVIRFLQVV 106


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 280 ISLFNSSLASIFPSFRRFT 224
           +S FN S +S+FP++ R T
Sbjct: 52  VSNFNESSSSVFPNYIRTT 70


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 280 ISLFNSSLASIFPSFRRFT 224
           +S FN S +S+FP++ R T
Sbjct: 52  VSNFNESSSSVFPNYIRTT 70


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 769 P*SANTHDPPEQSKAAPNSAAVPHHAQRRA 680
           P SA +  PPE+  A+P    VP  +  R+
Sbjct: 39  PNSAASPAPPEEEAASPTPGDVPTPSSPRS 68


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -3

Query: 702 HTTPSDELGDYRLSRLYHNSS 640
           + TP+D + +Y L + +HN +
Sbjct: 60  NVTPADSMVNYTLGQHHHNGA 80


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -3

Query: 702 HTTPSDELGDYRLSRLYHNSS 640
           + TP+D + +Y L + +HN +
Sbjct: 119 NVTPADSMVNYTLGQHHHNGA 139


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -3

Query: 702 HTTPSDELGDYRLSRLYHNSS 640
           + TP+D + +Y L + +HN +
Sbjct: 60  NVTPADSMVNYTLGQHHHNGA 80


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -3

Query: 702 HTTPSDELGDYRLSRLYHNSS 640
           + TP+D + +Y L + +HN +
Sbjct: 119 NVTPADSMVNYTLGQHHHNGA 139


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +1

Query: 466 IFATFFGSCLCIALTWD 516
           +FA F+ + +C+A  +D
Sbjct: 463 VFANFYDAMICVAYKFD 479


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 150 DTKNITNSFSSTNNKNLGNLKIYVLSS 70
           D K+I       N+KNLG + ++ L +
Sbjct: 335 DPKSIQLKVEFANSKNLGGVMVWSLDT 361


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 150 DTKNITNSFSSTNNKNLGNLKIYVLSS 70
           D K+I       N+KNLG + ++ L +
Sbjct: 335 DPKSIQLKVEFANSKNLGGVMVWSLDT 361


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 437 IFFLNRYTFHETVTDAFARW 378
           +F  +R  FH   T + +RW
Sbjct: 250 LFLTHRKPFHPASTQSLSRW 269


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 494 RHEPKNVANIMDLL 453
           R  P  +ANIMDLL
Sbjct: 879 RWVPSTIANIMDLL 892


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 494 RHEPKNVANIMDLL 453
           R  P  +ANIMDLL
Sbjct: 879 RWVPSTIANIMDLL 892


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 494 RHEPKNVANIMDLL 453
           R  P  +ANIMDLL
Sbjct: 879 RWVPSTIANIMDLL 892


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 494 RHEPKNVANIMDLL 453
           R  P  +ANIMDLL
Sbjct: 879 RWVPSTIANIMDLL 892


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 364 YVTQRHLANASVTVS*KVYRFKKKMKLNLFKR 459
           +  ++H   A   +   +YR   + KLN+FKR
Sbjct: 383 FAIRQHAVTAKFPIY--LYRISVETKLNVFKR 412


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 364 YVTQRHLANASVTVS*KVYRFKKKMKLNLFKR 459
           +  ++H   A   +   +YR   + KLN+FKR
Sbjct: 385 FAIRQHAVTAKFPIY--LYRMSVETKLNVFKR 414


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -2

Query: 469 ISWTS*ID*ASFFF*IDTLFTKQLLMRSLDGVVSH 365
           I W+S +  + +F  +D   T QL +     V+SH
Sbjct: 417 IMWSSPLTESPYFEKLDVKVTVQLWLGDPSSVLSH 451


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 415 VYRFKKKMKLNLFKR 459
           +YR   + KLN+FKR
Sbjct: 398 LYRMSVETKLNVFKR 412


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 415 VYRFKKKMKLNLFKR 459
           +YR   + KLN+FKR
Sbjct: 400 LYRMSVETKLNVFKR 414


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,452
Number of Sequences: 336
Number of extensions: 3590
Number of successful extensions: 28
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23140487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -