Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021233
         (796 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   2.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.8  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   4.9  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   8.6  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   8.6  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 189 YKLLFGRNRTGRQN 148
           Y LLFGR+R  R N
Sbjct: 47  YTLLFGRSRKSRMN 60


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = -1

Query: 175 WEKSHR*AKHKRSYRVSQFLTFSIGIRTFCSV 80
           W K      HK  +RV    T +    TFC+V
Sbjct: 404 WAKLGLEINHKEDFRVCLVFTLTGPFFTFCNV 435


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = -1

Query: 664 ICHYFSFLLNDFPWIALKFIGLNKLKDITGFELGTIPEHYGSFL 533
           + H  S  + +FP  A+K +   +  D++   L  +P++   FL
Sbjct: 22  LTHALSSSVQNFPSDAIKILNRLEELDLSNNRLRNVPDNSFHFL 65


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 521 IFFFKEGAVVFWNCSELEAS 580
           IF  +    VFWNC   EAS
Sbjct: 101 IFADESKCDVFWNCWNGEAS 120


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 521 IFFFKEGAVVFWNCSELEAS 580
           IF  +    VFWNC   EAS
Sbjct: 101 IFADESKCDVFWNCWNGEAS 120


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,019
Number of Sequences: 336
Number of extensions: 4022
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)