Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021233
         (796 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82083-8|CAB04968.2|  374|Caenorhabditis elegans Hypothetical pr...    44   1e-04
AL021480-6|CAD90181.1|  374|Caenorhabditis elegans Hypothetical ...    44   1e-04
Z75526-7|CAE17729.1|  325|Caenorhabditis elegans Hypothetical pr...    30   2.2  
AC006675-10|AAK84551.2|  280|Caenorhabditis elegans Serpentine r...    29   2.9  
Z70718-5|CAA94670.1|  197|Caenorhabditis elegans Hypothetical pr...    29   5.1  
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl...    29   5.1  
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl...    29   5.1  
AL110477-15|CAB54331.2|  295|Caenorhabditis elegans Hypothetical...    28   8.9  

>Z82083-8|CAB04968.2|  374|Caenorhabditis elegans Hypothetical
           protein ZK1010.2 protein.
          Length = 374

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
 Frame = +2

Query: 509 EQREIFFFKEGAVVFWNCSELEASNVLEFVKPYELESYPREVIEKEREIMTYIYQPNSKK 688
           E  EIF F++G VVFWN    + S++L  ++ Y    Y   ++  E++ M Y +   S  
Sbjct: 119 ELSEIFVFRDGVVVFWNVDSSQRSHILRELERYADAPYDSMIVMDEQDRMFYKFSEQSTG 178

Query: 689 CHLQESCFIMVPE--------RDNSLERFAFSQ 763
             +++  F +  +         +  LERFA SQ
Sbjct: 179 STIRQDRFYLSGKHLDAFHGSNEAILERFALSQ 211


>AL021480-6|CAD90181.1|  374|Caenorhabditis elegans Hypothetical
           protein ZK1010.2 protein.
          Length = 374

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
 Frame = +2

Query: 509 EQREIFFFKEGAVVFWNCSELEASNVLEFVKPYELESYPREVIEKEREIMTYIYQPNSKK 688
           E  EIF F++G VVFWN    + S++L  ++ Y    Y   ++  E++ M Y +   S  
Sbjct: 119 ELSEIFVFRDGVVVFWNVDSSQRSHILRELERYADAPYDSMIVMDEQDRMFYKFSEQSTG 178

Query: 689 CHLQESCFIMVPE--------RDNSLERFAFSQ 763
             +++  F +  +         +  LERFA SQ
Sbjct: 179 STIRQDRFYLSGKHLDAFHGSNEAILERFALSQ 211


>Z75526-7|CAE17729.1|  325|Caenorhabditis elegans Hypothetical
           protein C06H2.7 protein.
          Length = 325

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 20  YVTFKNNCINRQFYILKNVRNGTKCPYTYR 109
           Y+ F+N     + ++  N+ NGTK   TYR
Sbjct: 86  YIQFRNQLKGPEVHVFLNIENGTKIVTTYR 115


>AC006675-10|AAK84551.2|  280|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 57 protein.
          Length = 280

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 455 NSRNR*CGRSQCGLQYWLEQREIFFF 532
           N  N  C  +QC LQYW+   ++ FF
Sbjct: 156 NCENFQCTVNQCYLQYWMVHEQVVFF 181


>Z70718-5|CAA94670.1|  197|Caenorhabditis elegans Hypothetical
           protein C04G2.8 protein.
          Length = 197

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +1

Query: 490 RFTILARTERDIFLQGRSRSVLELFRARS 576
           RFT LA+T+R +  + RSRS     R+RS
Sbjct: 19  RFTPLAKTKRTVVSRSRSRSASRARRSRS 47


>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
           methyltransferase-likeprotein 1, isoform b protein.
          Length = 1590

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = -2

Query: 570 SSEQFQNTTAPSLKKNISLCSSQYCKPHWLRP--HYLFLLFLSFRVRTASALPMPPSEP 400
           +S+Q   + +P  +      S+    P   RP  H+L   + SF   + S LP PP EP
Sbjct: 263 NSKQSGESQSPWERAREKSASNPLSSPTMSRPRIHFLHPAYQSFTNDSVSPLPPPPPEP 321


>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
           methyltransferase-likeprotein 1, isoform a protein.
          Length = 1604

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = -2

Query: 570 SSEQFQNTTAPSLKKNISLCSSQYCKPHWLRP--HYLFLLFLSFRVRTASALPMPPSEP 400
           +S+Q   + +P  +      S+    P   RP  H+L   + SF   + S LP PP EP
Sbjct: 277 NSKQSGESQSPWERAREKSASNPLSSPTMSRPRIHFLHPAYQSFTNDSVSPLPPPPPEP 335


>AL110477-15|CAB54331.2|  295|Caenorhabditis elegans Hypothetical
           protein Y113G7B.9 protein.
          Length = 295

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 473 CGRSQCGLQYWLEQREIFF 529
           C  +QC   YWL QR I F
Sbjct: 163 CATNQCFFHYWLIQRSIIF 181


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,916,288
Number of Sequences: 27780
Number of extensions: 371493
Number of successful extensions: 947
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)