Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021231
(745 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58755-1|AAB00691.3| 403|Caenorhabditis elegans Nematode astaci... 32 0.49
AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucle... 31 1.1
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so... 31 1.1
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 29 3.5
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 29 3.5
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 29 3.5
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 29 3.5
U00058-6|AAA50729.2| 189|Caenorhabditis elegans Hypothetical pr... 29 4.6
L16559-6|AAA27931.1| 397|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z81482-2|CAB03954.3| 377|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z68131-2|CAA92218.1| 614|Caenorhabditis elegans Hypothetical pr... 28 8.0
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 28 8.0
AC084158-18|AAK68583.1| 300|Caenorhabditis elegans Hypothetical... 28 8.0
>U58755-1|AAB00691.3| 403|Caenorhabditis elegans Nematode astacin
protease protein 8 protein.
Length = 403
Score = 31.9 bits (69), Expect = 0.49
Identities = 24/91 (26%), Positives = 38/91 (41%)
Frame = +1
Query: 268 YLNLACSVNGYTNLTTYDSKLRQDINKSREASPIRPITYTYQYRSENNSLLVPVPVSANK 447
Y +LA S NG+ + S++ I + + SPI + Y+ + L V + +K
Sbjct: 262 YDSLAFSKNGFETMVAKQSEMTAVIGAAIDFSPIDILKMNLMYQCSDVKLPPTVVGTTDK 321
Query: 448 LLVPTFGPHDTTDLTAKAPSRRTLIRRWQHR 540
+VP P T + R L RW R
Sbjct: 322 TIVPVPAP-SVTVVEDDCRDRTNLCWRWIDR 351
>AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucleotide
exchange factorfor RAS protein.
Length = 1413
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 172 PETTPKSSRRLVKSSI--PWTTQT*RRPAPKKPSYLNLACSVNGYTNLTTYDS 324
P P+SSR +S+ P TTQ PAPK ++ A S T TT S
Sbjct: 1272 PPLLPRSSRANQSNSVSLPPTTQAPMPPAPKSSGMMSTATSPTTLTTTTTPSS 1324
>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
homolog protein 1 protein.
Length = 1493
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 172 PETTPKSSRRLVKSSI--PWTTQT*RRPAPKKPSYLNLACSVNGYTNLTTYDS 324
P P+SSR +S+ P TTQ PAPK ++ A S T TT S
Sbjct: 1272 PPLLPRSSRANQSNSVSLPPTTQAPMPPAPKSSGMMSTATSPTTLTTTTTPSS 1324
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 29.1 bits (62), Expect = 3.5
Identities = 26/109 (23%), Positives = 39/109 (35%)
Frame = +1
Query: 181 TPKSSRRLVKSSIPWTTQT*RRPAPKKPSYLNLACSVNGYTNLTTYDSKLRQDINKSREA 360
TPKS+ + SIP T + A P+ A + T + D + E
Sbjct: 384 TPKSNGHIANGSIPGTPSVAQESAKATPAATPAATATPAATATPAATGTPKADTAFNFEE 443
Query: 361 SPIRPITYTYQYRSENNSLLVPVPVSANKLLVPTFGPHDTTDLTAKAPS 507
+P P + +E+N L P P + P T T K P+
Sbjct: 444 TPATPRSSVPATPTESN-LTTPAPKTPKTPKTPRTPRTPKTPRTPKTPA 491
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 29.1 bits (62), Expect = 3.5
Identities = 26/109 (23%), Positives = 39/109 (35%)
Frame = +1
Query: 181 TPKSSRRLVKSSIPWTTQT*RRPAPKKPSYLNLACSVNGYTNLTTYDSKLRQDINKSREA 360
TPKS+ + SIP T + A P+ A + T + D + E
Sbjct: 334 TPKSNGHIANGSIPGTPSVAQESAKATPAATPAATATPAATATPAATGTPKADTAFNFEE 393
Query: 361 SPIRPITYTYQYRSENNSLLVPVPVSANKLLVPTFGPHDTTDLTAKAPS 507
+P P + +E+N L P P + P T T K P+
Sbjct: 394 TPATPRSSVPATPTESN-LTTPAPKTPKTPKTPRTPRTPKTPRTPKTPA 441
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 29.1 bits (62), Expect = 3.5
Identities = 26/109 (23%), Positives = 39/109 (35%)
Frame = +1
Query: 181 TPKSSRRLVKSSIPWTTQT*RRPAPKKPSYLNLACSVNGYTNLTTYDSKLRQDINKSREA 360
TPKS+ + SIP T + A P+ A + T + D + E
Sbjct: 384 TPKSNGHIANGSIPGTPSVAQESAKATPAATPAATATPAATATPAATGTPKADTAFNFEE 443
Query: 361 SPIRPITYTYQYRSENNSLLVPVPVSANKLLVPTFGPHDTTDLTAKAPS 507
+P P + +E+N L P P + P T T K P+
Sbjct: 444 TPATPRSSVPATPTESN-LTTPAPKTPKTPKTPRTPRTPKTPRTPKTPA 491
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 29.1 bits (62), Expect = 3.5
Identities = 26/109 (23%), Positives = 39/109 (35%)
Frame = +1
Query: 181 TPKSSRRLVKSSIPWTTQT*RRPAPKKPSYLNLACSVNGYTNLTTYDSKLRQDINKSREA 360
TPKS+ + SIP T + A P+ A + T + D + E
Sbjct: 384 TPKSNGHIANGSIPGTPSVAQESAKATPAATPAATATPAATATPAATGTPKADTAFNFEE 443
Query: 361 SPIRPITYTYQYRSENNSLLVPVPVSANKLLVPTFGPHDTTDLTAKAPS 507
+P P + +E+N L P P + P T T K P+
Sbjct: 444 TPATPRSSVPATPTESN-LTTPAPKTPKTPKTPRTPRTPKTPRTPKTPA 491
>U00058-6|AAA50729.2| 189|Caenorhabditis elegans Hypothetical
protein W03A5.5 protein.
Length = 189
Score = 28.7 bits (61), Expect = 4.6
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +1
Query: 256 KKPSYLNLACSVNGYT 303
+ PSYL ++C++NGYT
Sbjct: 105 RTPSYLRISCALNGYT 120
>L16559-6|AAA27931.1| 397|Caenorhabditis elegans Hypothetical
protein C06E1.8 protein.
Length = 397
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +3
Query: 522 PSLATSTLHVYMAAENKQLKDDFLGPDMTTTSRPYISTESKNFATSMLHQ 671
P +T +++A +++KD+ PD+ T+ P S+ S S HQ
Sbjct: 210 PKPIPTTAPIFVADSKEKIKDEVEKPDVYTSQSPTCSSVSFKSDLSAFHQ 259
>Z81482-2|CAB03954.3| 377|Caenorhabditis elegans Hypothetical
protein C40H5.3 protein.
Length = 377
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -3
Query: 665 EHRGSKVLALCRYVRAACGRHVGA-QKIVFQLFVFSGHIHMEGRCCQRRISVRLEGAF 495
E+ G ++ LC Y A G++VG QK V + H + C ++ + ++ F
Sbjct: 254 ENNGYRLTYLCGYSEAGKGKYVGVWQKPVKSEAQYEAHYGLTMEACMQKDKILVQKGF 311
>Z68131-2|CAA92218.1| 614|Caenorhabditis elegans Hypothetical
protein B0395.3 protein.
Length = 614
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 477 YNRFDGESAFQAHTDPSLATSTLHVYMAAENKQLKDDFLG 596
YN +G+ + A ++ + +H Y+ A+N QLK D G
Sbjct: 114 YNTEEGQLEYAA----KISQAAVHFYLRAKNNQLKPDMAG 149
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Frame = +1
Query: 292 NGYTNL----TTYDSKLRQDINKSREASPIRPITYTYQYRSENNSLLVPVPVSANKLLVP 459
N Y+N + Y+S+ Q KS + Y Y S+ + P PV+AN
Sbjct: 568 NNYSNQNYSSSAYNSQSSQHQTKSIPVQNYQSSNYNKSYSSQTTTQHQPQPVAANNNYST 627
Query: 460 TFGPHDTTDLTAKAP 504
++ ++ TA+ P
Sbjct: 628 SYHTERSSTTTAQQP 642
>AC084158-18|AAK68583.1| 300|Caenorhabditis elegans Hypothetical
protein Y69A2AR.9 protein.
Length = 300
Score = 27.9 bits (59), Expect = 8.0
Identities = 26/105 (24%), Positives = 39/105 (37%), Gaps = 10/105 (9%)
Frame = +1
Query: 10 NSIVYHKSSERLHIPHTRAGRLESTTKLLDPNPGGHPNQDPRGDHTDS*EI*ASPETTPK 189
NS S+E T + STT+ +P P P P ++ A T PK
Sbjct: 107 NSTTTASSTEATTFSTTTSDEKTSTTEKTNPGPAPGPGPGPFASSPSPKDVTAEAPTPPK 166
Query: 190 SSRRLV---KSSIPWTTQT*RRPAPKKPS-------YLNLACSVN 294
+++ ++ P Q P PS Y N+ CS+N
Sbjct: 167 TTKTTQTPGRTLPPEERQEETDPLANGPSNIESDEVYSNMTCSMN 211
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,350,732
Number of Sequences: 27780
Number of extensions: 427524
Number of successful extensions: 1286
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1285
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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