Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021230
(772 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g76030.1 68414.m08827 vacuolar ATP synthase subunit B / V-ATP... 151 4e-37
At1g20260.2 68414.m02530 vacuolar ATP synthase subunit B, putati... 148 5e-36
At1g20260.1 68414.m02529 vacuolar ATP synthase subunit B, putati... 148 5e-36
At4g38510.2 68417.m05447 vacuolar ATP synthase subunit B, putati... 145 2e-35
At4g38510.1 68417.m05446 vacuolar ATP synthase subunit B, putati... 145 2e-35
At5g08690.1 68418.m01034 ATP synthase beta chain 2, mitochondria... 35 0.052
At5g08680.1 68418.m01033 ATP synthase beta chain, mitochondrial,... 35 0.052
At5g08670.1 68418.m01032 ATP synthase beta chain 1, mitochondria... 35 0.052
At2g07698.1 68415.m00949 ATP synthase alpha chain, mitochondrial... 34 0.12
At1g78900.1 68414.m09198 vacuolar ATP synthase catalytic subunit... 32 0.36
At1g49190.1 68414.m05515 two-component responsive regulator fami... 32 0.48
At2g32800.1 68415.m04015 protein kinase family protein contains ... 31 0.64
At5g52300.1 68418.m06491 low-temperature-responsive 65 kD protei... 30 1.9
At1g80440.1 68414.m09419 kelch repeat-containing F-box family pr... 28 5.9
At1g44910.1 68414.m05146 FF domain-containing protein / WW domai... 28 7.9
>At1g76030.1 68414.m08827 vacuolar ATP synthase subunit B / V-ATPase
B subunit / vacuolar proton pump B subunit / V-ATPase 57
kDa subunit identical to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}
Length = 486
Score = 151 bits (367), Expect = 4e-37
Identities = 83/117 (70%), Positives = 89/117 (76%), Gaps = 3/117 (2%)
Frame = +1
Query: 421 GSPNLGRRLLGHPGSAHQPMVTYLPRGDD*TGISAIDVMNSIARGQKIPIFSAAGLPHNE 600
G P L L GS+ P P TGIS IDVMNSIARGQKIP+FSAAGLPHNE
Sbjct: 114 GPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNE 173
Query: 601 IAAQICRQAGLVKVPGKSV--LDDH-EDNFAIVFAAMGVNMETARFFKQDFEENGSM 762
IAAQICRQAGLVK K+V L+DH EDNFAIVFAAMGVNMETA+FFK+DFEENGSM
Sbjct: 174 IAAQICRQAGLVKRLEKTVDLLEDHGEDNFAIVFAAMGVNMETAQFFKRDFEENGSM 230
Score = 134 bits (324), Expect = 6e-32
Identities = 63/86 (73%), Positives = 70/86 (81%)
Frame = +2
Query: 254 VLEVSGSKAVVQVFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPI 433
VLEV G KAVVQVFEGTSGID K T +FTG++L+TPVS DMLGR+FNGSGKPID GPPI
Sbjct: 58 VLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPI 117
Query: 434 LAEDFLDIQGQPINPWSRIYPEEMIK 511
L E +LDI G INP R YPEEMI+
Sbjct: 118 LPEAYLDISGSSINPSERTYPEEMIQ 143
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/41 (63%), Positives = 33/41 (80%)
Frame = +3
Query: 132 LTYKTVSGVNGPLVILDEVKFPKFSEIVQLKLADGTLRSGQ 254
+ Y+TVSGV GPLVILD+VK PK+ EIV ++L DG+ R GQ
Sbjct: 17 MEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLGDGSTRRGQ 57
>At1g20260.2 68414.m02530 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
strong similarity to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}; contains Pfam profiles PF00006:
ATP synthase alpha/beta family nucleotide-binding
domain, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 485
Score = 148 bits (358), Expect = 5e-36
Identities = 81/118 (68%), Positives = 88/118 (74%), Gaps = 4/118 (3%)
Frame = +1
Query: 421 GSPNLGRRLLGHPGSAHQPMVTYLPRGDD*TGISAIDVMNSIARGQKIPIFSAAGLPHNE 600
G P L L GS+ P P TGIS IDVMNSIARGQKIP+FSAAGLPHNE
Sbjct: 114 GPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNE 173
Query: 601 IAAQICRQAGLVKVPGKS---VLDDH-EDNFAIVFAAMGVNMETARFFKQDFEENGSM 762
IAAQICRQAGLVK K+ + +DH EDNFAIVFAAMGVNMETA+FFK+DFEENGSM
Sbjct: 174 IAAQICRQAGLVKRLEKTENLIQEDHGEDNFAIVFAAMGVNMETAQFFKRDFEENGSM 231
Score = 134 bits (324), Expect = 6e-32
Identities = 63/86 (73%), Positives = 70/86 (81%)
Frame = +2
Query: 254 VLEVSGSKAVVQVFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPI 433
VLEV G KAVVQVFEGTSGID K T +FTG++L+TPVS DMLGR+FNGSGKPID GPPI
Sbjct: 58 VLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPI 117
Query: 434 LAEDFLDIQGQPINPWSRIYPEEMIK 511
L E +LDI G INP R YPEEMI+
Sbjct: 118 LPEAYLDISGSSINPSERTYPEEMIQ 143
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/41 (63%), Positives = 33/41 (80%)
Frame = +3
Query: 132 LTYKTVSGVNGPLVILDEVKFPKFSEIVQLKLADGTLRSGQ 254
+ Y+TVSGV GPLVILD+VK PK+ EIV ++L DG+ R GQ
Sbjct: 17 MEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLGDGSTRRGQ 57
>At1g20260.1 68414.m02529 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
strong similarity to SP|P11574 Vacuolar ATP synthase
subunit B (EC 3.6.3.14) (V-ATPase B subunit) (Vacuolar
proton pump B subunit) (V-ATPase 57 kDa subunit)
{Arabidopsis thaliana}; contains Pfam profiles PF00006:
ATP synthase alpha/beta family nucleotide-binding
domain, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 330
Score = 148 bits (358), Expect = 5e-36
Identities = 81/118 (68%), Positives = 88/118 (74%), Gaps = 4/118 (3%)
Frame = +1
Query: 421 GSPNLGRRLLGHPGSAHQPMVTYLPRGDD*TGISAIDVMNSIARGQKIPIFSAAGLPHNE 600
G P L L GS+ P P TGIS IDVMNSIARGQKIP+FSAAGLPHNE
Sbjct: 114 GPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNE 173
Query: 601 IAAQICRQAGLVKVPGKS---VLDDH-EDNFAIVFAAMGVNMETARFFKQDFEENGSM 762
IAAQICRQAGLVK K+ + +DH EDNFAIVFAAMGVNMETA+FFK+DFEENGSM
Sbjct: 174 IAAQICRQAGLVKRLEKTENLIQEDHGEDNFAIVFAAMGVNMETAQFFKRDFEENGSM 231
Score = 134 bits (324), Expect = 6e-32
Identities = 63/86 (73%), Positives = 70/86 (81%)
Frame = +2
Query: 254 VLEVSGSKAVVQVFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPI 433
VLEV G KAVVQVFEGTSGID K T +FTG++L+TPVS DMLGR+FNGSGKPID GPPI
Sbjct: 58 VLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPI 117
Query: 434 LAEDFLDIQGQPINPWSRIYPEEMIK 511
L E +LDI G INP R YPEEMI+
Sbjct: 118 LPEAYLDISGSSINPSERTYPEEMIQ 143
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/41 (63%), Positives = 33/41 (80%)
Frame = +3
Query: 132 LTYKTVSGVNGPLVILDEVKFPKFSEIVQLKLADGTLRSGQ 254
+ Y+TVSGV GPLVILD+VK PK+ EIV ++L DG+ R GQ
Sbjct: 17 MEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLGDGSTRRGQ 57
>At4g38510.2 68417.m05447 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
very strong similarity to SP|P11574 Vacuolar ATP
synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit)
(Vacuolar proton pump B subunit) (V-ATPase 57 kDa
subunit) {Arabidopsis thaliana}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 487
Score = 145 bits (352), Expect = 2e-35
Identities = 81/117 (69%), Positives = 87/117 (74%), Gaps = 3/117 (2%)
Frame = +1
Query: 421 GSPNLGRRLLGHPGSAHQPMVTYLPRGDD*TGISAIDVMNSIARGQKIPIFSAAGLPHNE 600
G P L L GS+ P P TGIS IDVMNSIARGQKIP+FSAAGLPHNE
Sbjct: 115 GPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNE 174
Query: 601 IAAQICRQAGLVKVPGKS--VLDDHE-DNFAIVFAAMGVNMETARFFKQDFEENGSM 762
IAAQICRQAGLVK KS +L+ E DNFAIVFAAMGVNMETA+FFK+DFEENGSM
Sbjct: 175 IAAQICRQAGLVKRLEKSDNLLEHQEDDNFAIVFAAMGVNMETAQFFKRDFEENGSM 231
Score = 134 bits (325), Expect = 5e-32
Identities = 63/86 (73%), Positives = 70/86 (81%)
Frame = +2
Query: 254 VLEVSGSKAVVQVFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPI 433
VLEV G KAVVQVFEGTSGID K T +FTG++L+TPVS DMLGR+FNGSGKPID GPPI
Sbjct: 59 VLEVDGEKAVVQVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPI 118
Query: 434 LAEDFLDIQGQPINPWSRIYPEEMIK 511
L E +LDI G INP R YPEEMI+
Sbjct: 119 LPEAYLDISGSSINPSERTYPEEMIQ 144
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/41 (63%), Positives = 33/41 (80%)
Frame = +3
Query: 132 LTYKTVSGVNGPLVILDEVKFPKFSEIVQLKLADGTLRSGQ 254
+ Y+TVSGV GPLVIL++VK PK+ EIV ++L DGT R GQ
Sbjct: 18 MEYRTVSGVAGPLVILEKVKGPKYQEIVNIRLGDGTTRRGQ 58
>At4g38510.1 68417.m05446 vacuolar ATP synthase subunit B, putative
/ V-ATPase B subunit, putative / vacuolar proton pump B
subunit, putative / V-ATPase 57 kDa subunit, putative
very strong similarity to SP|P11574 Vacuolar ATP
synthase subunit B (EC 3.6.3.14) (V-ATPase B subunit)
(Vacuolar proton pump B subunit) (V-ATPase 57 kDa
subunit) {Arabidopsis thaliana}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain
Length = 487
Score = 145 bits (352), Expect = 2e-35
Identities = 81/117 (69%), Positives = 87/117 (74%), Gaps = 3/117 (2%)
Frame = +1
Query: 421 GSPNLGRRLLGHPGSAHQPMVTYLPRGDD*TGISAIDVMNSIARGQKIPIFSAAGLPHNE 600
G P L L GS+ P P TGIS IDVMNSIARGQKIP+FSAAGLPHNE
Sbjct: 115 GPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNE 174
Query: 601 IAAQICRQAGLVKVPGKS--VLDDHE-DNFAIVFAAMGVNMETARFFKQDFEENGSM 762
IAAQICRQAGLVK KS +L+ E DNFAIVFAAMGVNMETA+FFK+DFEENGSM
Sbjct: 175 IAAQICRQAGLVKRLEKSDNLLEHQEDDNFAIVFAAMGVNMETAQFFKRDFEENGSM 231
Score = 134 bits (325), Expect = 5e-32
Identities = 63/86 (73%), Positives = 70/86 (81%)
Frame = +2
Query: 254 VLEVSGSKAVVQVFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPI 433
VLEV G KAVVQVFEGTSGID K T +FTG++L+TPVS DMLGR+FNGSGKPID GPPI
Sbjct: 59 VLEVDGEKAVVQVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPI 118
Query: 434 LAEDFLDIQGQPINPWSRIYPEEMIK 511
L E +LDI G INP R YPEEMI+
Sbjct: 119 LPEAYLDISGSSINPSERTYPEEMIQ 144
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/41 (63%), Positives = 33/41 (80%)
Frame = +3
Query: 132 LTYKTVSGVNGPLVILDEVKFPKFSEIVQLKLADGTLRSGQ 254
+ Y+TVSGV GPLVIL++VK PK+ EIV ++L DGT R GQ
Sbjct: 18 MEYRTVSGVAGPLVILEKVKGPKYQEIVNIRLGDGTTRRGQ 58
>At5g08690.1 68418.m01034 ATP synthase beta chain 2, mitochondrial
identical to SP|P83484 ATP synthase beta chain 2,
mitochondrial precursor (EC 3.6.3.14) {Arabidopsis
thaliana}; strong similarity to SP|P17614 ATP synthase
beta chain, mitochondrial precursor (EC 3.6.3.14)
{Nicotiana plumbaginifolia}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain; supporting cDNA
gi|26452187|dbj|AK118582.1|
Length = 556
Score = 35.1 bits (77), Expect = 0.052
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +2
Query: 254 VLEVS---GSKAVVQV-FEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDK 421
VLEVS G V + +GT G+ + TG + PV LGR+ N G+PID+
Sbjct: 121 VLEVSHHLGQNVVRTIAMDGTEGLVRGRKVLN-TGAPITVPVGRATLGRIMNVLGEPIDE 179
Query: 422 GPPILAEDFLDI 457
I E +L I
Sbjct: 180 RGEIKTEHYLPI 191
>At5g08680.1 68418.m01033 ATP synthase beta chain, mitochondrial,
putative strong similarity to SP|P83483 ATP synthase
beta chain 1, mitochondrial precursor (EC 3.6.3.14)
{Arabidopsis thaliana}, SP|P17614 ATP synthase beta
chain, mitochondrial precursor (EC 3.6.3.14) {Nicotiana
plumbaginifolia}; contains Pfam profiles PF00006: ATP
synthase alpha/beta family nucleotide-binding domain,
PF00306: ATP synthase ab C terminal, PF02874: ATP
synthase alpha/beta family beta-barrel domain
Length = 559
Score = 35.1 bits (77), Expect = 0.052
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +2
Query: 254 VLEVS---GSKAVVQV-FEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDK 421
VLEVS G V + +GT G+ + TG + PV LGR+ N G+PID+
Sbjct: 124 VLEVSHHLGQNVVRTIAMDGTEGLVRGRKVLN-TGAPITVPVGRATLGRIMNVLGEPIDE 182
Query: 422 GPPILAEDFLDI 457
I E +L I
Sbjct: 183 RGEIKTEHYLPI 194
>At5g08670.1 68418.m01032 ATP synthase beta chain 1, mitochondrial
identical to SP|P83483 ATP synthase beta chain 1,
mitochondrial precursor (EC 3.6.3.14) {Arabidopsis
thaliana}; strong similarity to SP|P17614 ATP synthase
beta chain, mitochondrial precursor (EC 3.6.3.14)
{Nicotiana plumbaginifolia}; contains Pfam profiles
PF00006: ATP synthase alpha/beta family
nucleotide-binding domain, PF00306: ATP synthase ab C
terminal, PF02874: ATP synthase alpha/beta family
beta-barrel domain; supporting cDNA
gi|26452102|dbj|AK118538.1|
Length = 556
Score = 35.1 bits (77), Expect = 0.052
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +2
Query: 254 VLEVS---GSKAVVQV-FEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDK 421
VLEVS G V + +GT G+ + TG + PV LGR+ N G+PID+
Sbjct: 121 VLEVSHHLGQNVVRTIAMDGTEGLVRGRKVLN-TGAPITVPVGRATLGRIMNVLGEPIDE 179
Query: 422 GPPILAEDFLDI 457
I E +L I
Sbjct: 180 RGEIKTEHYLPI 191
>At2g07698.1 68415.m00949 ATP synthase alpha chain, mitochondrial,
putative very strong similarity to SP|P23413 ATP
synthase alpha chain, mitochondrial (EC 3.6.3.14)
{Brassica campestris}; contains Pfam profiles PF00006:
ATP synthase alpha/beta family nucleotide-binding
domain, PF00306: ATP synthase ab C terminal, PF02874:
ATP synthase alpha/beta family beta-barrel domain
Length = 777
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +2
Query: 257 LEVSGSKAVVQVFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPID 418
L + + VF G + I + L + TG I+ P + MLGRV + G PID
Sbjct: 336 LNLENENVGIVVFGGDTAIK-EGDLVKRTGSIVDVPAGKAMLGRVVDAMGVPID 388
>At1g78900.1 68414.m09198 vacuolar ATP synthase catalytic subunit A
/ V-ATPase A subunit / vacuolar proton pump alpha
subunit / V-ATPase 69 kDa subunit identical to SP|O23654
Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)
(V-ATPase A subunit) (Vacuolar proton pump alpha
subunit) (V-ATPase 69 kDa subunit) {Arabidopsis
thaliana}
Length = 623
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +2
Query: 254 VLEVSGSKAVVQVFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPI 415
++ + G A +QV+E T+G+ + + T L + +LG +F+G +P+
Sbjct: 57 IIRLEGDSATIQVYEETAGLTVNDPVLR-THKPLSVELGPGILGNIFDGIQRPL 109
>At1g49190.1 68414.m05515 two-component responsive regulator family
protein / response regulator family protein contains
Pfam profile: PF00072 response regulator receiver domain
;contains similarity to two-component response regulator
protein (ARR2) GI:4210451 from [Arabidopsis thaliana]
Length = 608
Score = 31.9 bits (69), Expect = 0.48
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -2
Query: 360 VRRMSPVNSQSVFFASIPDVPSNTWTTALEPLTSSTDQNEGF 235
V SP+ +Q F P P TWT ++P+ S+ Q + F
Sbjct: 218 VNGYSPIMNQDNMFNKAPPKPRMTWTEVIQPVQSNLVQTKEF 259
>At2g32800.1 68415.m04015 protein kinase family protein contains
dual protein kinase domains, Pfam:PF00069
Length = 851
Score = 31.5 bits (68), Expect = 0.64
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = -2
Query: 423 PLSMGLPEPLNTRPNMSSETGVRRMSPVNSQSVFFASIPDVPSNTWTTALEP---LTSST 253
PL + L +T + ++ T M+ S + F AS PS+ + TALE T+ T
Sbjct: 434 PLYIPLSSLKSTSTSATTTTTRTTMTTTTSTTSFNASSESTPSSNYVTALEDSIYQTAET 493
Query: 252 DQNEGFHLQALAVQSQRTW 196
+N F+ + V S +++
Sbjct: 494 GENPYFNYNSRRVMSSKSF 512
>At5g52300.1 68418.m06491 low-temperature-responsive 65 kD protein
(LTI65) / desiccation-responsive protein 29B (RD29B)
nearly identical to SP|Q04980 Low-temperature-induced 65
kDa protein (Desiccation-responsive protein 29B)
{Arabidopsis thaliana}
Length = 619
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -2
Query: 456 MSKKSSAKIGGPLSMGLPEPLNTRPNMSSETGVRRMSPVNSQSVF 322
++K S A+ GG G+ E TR ++ E+G+ R P + F
Sbjct: 309 INKNSPARFGGESKAGMEEDFPTRGDVKVESGLGRDLPTGTHDQF 353
>At1g80440.1 68414.m09419 kelch repeat-containing F-box family
protein similar to SP|Q9ER30 Kelch-related protein 1
(Sarcosin) {Rattus norvegicus}; contains Pfam profiles
PF01344: Kelch motif, PF00646: F-box domain
Length = 354
Score = 28.3 bits (60), Expect = 5.9
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Frame = -3
Query: 332 RVCSSRQYLMSLRTLGRRLWSR*PRVLTRTKG--SICKL*LY--NLRELGELDFIQ-DDE 168
++ ++ +Y +S+ G LW+ P + +TKG C+L +L LG LD I
Sbjct: 71 KIIATPEYRISVLESGSGLWTELPPIPGQTKGLPLFCRLVSVGSDLIVLGGLDPITWQAH 130
Query: 167 RTVYTRHSLVSEPRLGNEVPGDCQDMF 87
+V+ L S+ R+G +PG + F
Sbjct: 131 DSVFVFSFLTSKWRVGATMPGVRRSFF 157
>At1g44910.1 68414.m05146 FF domain-containing protein / WW
domain-containing protein contains Pfam profiles
PF01846: FF domain, PF00397: WW domain
Length = 946
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 405 ANPSTRVPQSWPKTSWTSRVSPSTHGHVS 491
++P T VP S+P+ TS V P++ HV+
Sbjct: 104 SSPYTFVPSSYPQQQPTSLVQPNSQMHVA 132
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,016,494
Number of Sequences: 28952
Number of extensions: 440537
Number of successful extensions: 1293
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1288
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1716774400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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