Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021229
(752 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0566 + 4466318-4466695,4466736-4466909,4466941-4467038,446... 34 0.14
07_03_1483 + 26881032-26882035,26882130-26882204,26882324-268828... 33 0.24
12_02_0702 - 22278513-22278751,22279054-22279889,22279932-222799... 33 0.32
07_03_0486 - 18634813-18635168,18635258-18638726 32 0.56
12_02_1139 - 26402332-26402367,26402915-26402953,26403136-264032... 31 0.74
03_01_0578 + 4270835-4271482,4271763-4272140,4272353-4272444,427... 31 0.98
03_01_0007 + 79202-79433,80426-80713,80790-80870,81090-81191,816... 31 0.98
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 26 1.2
01_06_0572 - 30337572-30338107,30338209-30338422,30338505-303388... 31 1.3
07_03_0627 - 20061951-20062391,20062912-20062960,20063386-200638... 30 1.7
04_04_0243 - 23858975-23860706,23861178-23861230,23861338-238615... 30 1.7
10_01_0026 - 351737-353443 30 2.3
03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776 30 2.3
03_05_1091 + 30322035-30322739,30322861-30324043,30324114-303251... 29 3.0
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699... 25 3.5
04_01_0197 + 2323790-2324098,2324145-2324774 27 3.8
12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232 29 4.0
03_01_0574 + 4243019-4244284 29 4.0
02_04_0065 + 19395599-19395748,19396079-19396168,19396255-193963... 29 4.0
11_06_0692 + 26327487-26328509 29 5.2
07_03_1474 - 26766078-26766536,26766634-26766885,26767201-267674... 29 5.2
07_01_0370 + 2749353-2749786,2749949-2750346,2750435-2750519,275... 29 5.2
05_03_0172 - 9165904-9166428 29 5.2
10_06_0145 + 11215895-11216860 28 6.9
05_07_0066 + 27453611-27453627,27454729-27454872,27455998-274566... 28 6.9
03_06_0519 - 34481751-34482722 28 6.9
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 28 6.9
01_01_1130 + 8959909-8960396,8960588-8960638,8960736-8960827,896... 28 6.9
07_01_0474 + 3579653-3579821,3580407-3580744 28 9.2
04_04_1400 - 33259716-33260069,33260172-33260219,33260471-332605... 28 9.2
03_02_1009 + 13189349-13189592,13189782-13189882,13191085-131910... 28 9.2
01_05_0724 - 24612712-24612852,24612985-24613038,24613340-246134... 28 9.2
>11_01_0566 +
4466318-4466695,4466736-4466909,4466941-4467038,
4467211-4467346
Length = 261
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +1
Query: 553 LKEAKRIKNTQAPDTNTFIAATRGSSNSLDRSNGPCPATPPPPRSLSATPVASQQN 720
L++ I+ ++ T IAA + +S L ++ P P PPPP + + S +
Sbjct: 29 LEKLDEIEANRSKATEETIAANKATSTILKAASSPTPMAPPPPTPTKCSTICSSSD 84
>07_03_1483 +
26881032-26882035,26882130-26882204,26882324-26882861,
26883999-26884895,26885178-26885327,26885459-26885791,
26886501-26886695,26887805-26887918
Length = 1101
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +1
Query: 532 LKQNYQNLKEAKRIKNTQAPDTNTFIAATRGSSNSLDRSNGPCPATPPPP 681
L QN+Q L+E + ++ + +T IAA R ++ L ++ P PPPP
Sbjct: 76 LNQNFQKLEEIEARRSKASEET---IAAIRATTAILKAASSSTPMAPPPP 122
>12_02_0702 -
22278513-22278751,22279054-22279889,22279932-22279975,
22280350-22280463
Length = 410
Score = 32.7 bits (71), Expect = 0.32
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 547 QNLKEAKRIKNTQAPDTNTFIAATRGSSNSLDRSNGPCPATPPPP 681
Q L++ + I+ ++ T IAA R ++ L S+ P P PPPP
Sbjct: 110 QILQKLEEIEACRSKATEVTIAAIRTTTAILKASSSPTPMAPPPP 154
>07_03_0486 - 18634813-18635168,18635258-18638726
Length = 1274
Score = 31.9 bits (69), Expect = 0.56
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +3
Query: 87 ELVKMLADGEIVGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTESFGKEFKKIGR 266
E L+D +G G T+Y +L T+ VK H+ ML +SF +E K +GR
Sbjct: 956 EATANLSDQFAIGSGGSG-TVYRAELPTGETVAVKRIAHMDSDMLLHDKSFAREVKILGR 1014
>12_02_1139 -
26402332-26402367,26402915-26402953,26403136-26403287,
26403496-26403997,26404260-26404373,26404509-26404736,
26405375-26405457,26405677-26405824,26406778-26406861
Length = 461
Score = 31.5 bits (68), Expect = 0.74
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = +1
Query: 499 TIAGYPLEASHLKQNYQNLKEAKRIKNTQAPDTNTFIAATRGSSNSLDRSNGPCPATPPP 678
T+ G ++ + QN+ A R + DTN +A G N D + P P
Sbjct: 231 TLQGLEVDENQWSQNWLERWMAARPWENRLLDTNAKESAPTGDDNHADENEAKAPNKPKG 290
Query: 679 PRSLSAT-PVAS-QQNGTLRRYGH 744
S+S T P S ++NG + H
Sbjct: 291 KVSISTTHPNGSNKKNGANHKKSH 314
>03_01_0578 +
4270835-4271482,4271763-4272140,4272353-4272444,
4272637-4273240
Length = 573
Score = 31.1 bits (67), Expect = 0.98
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +1
Query: 571 IKNTQAPDTNTFIAATRGSSNSLDRSNGPCPATPPPPRSLSATP---VASQQNGT 726
+K + D+ A+ + S L +++ P P PPP ++++ P +A++ NGT
Sbjct: 256 VKKQMSKDSKKESASEKNSPPKLYKTSPPTPTPTPPPPAMTSPPKLNLAAKPNGT 310
>03_01_0007 +
79202-79433,80426-80713,80790-80870,81090-81191,
81677-81813
Length = 279
Score = 31.1 bits (67), Expect = 0.98
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +1
Query: 610 AATRGSSNSLDRSNGPCPATPPPPRSLSATPVASQQN 720
AA+ +S S DR N P PA PPPP P +S +
Sbjct: 11 AASSSASASADRLNSPTPA-PPPPAPPPPAPKSSSSS 46
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 26.2 bits (55), Expect(2) = 1.2
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +1
Query: 568 RIKNTQAPDTNTFIAATRGSSNSLDRSNGPCPATPPPP 681
R PDT T S + SN P P PPPP
Sbjct: 323 RFSTGSTPDTKQ---VTSPSPRPVQPSNAPPPPPPPPP 357
Score = 23.0 bits (47), Expect(2) = 1.2
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +1
Query: 655 PCPATPPPPRSLSATP 702
P P PPPP L+ P
Sbjct: 356 PPPPPPPPPPKLNTAP 371
>01_06_0572 -
30337572-30338107,30338209-30338422,30338505-30338862,
30338948-30339048,30339185-30339749,30340553-30340664,
30341196-30341372,30341589-30341686,30341859-30341953,
30342078-30342158
Length = 778
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1
Query: 604 FIAATRGSSNSLDRSNGPCPATPPPPRSLSATPVA 708
F A+ G+ LD S PCPATPPPP L+ +A
Sbjct: 651 FACASGGAQ--LDHSL-PCPATPPPPYQLNHPSLA 682
>07_03_0627 -
20061951-20062391,20062912-20062960,20063386-20063851,
20063933-20064139,20064267-20064405,20065146-20065282,
20065414-20065657,20065808-20065969,20066049-20066167,
20066240-20066314,20066327-20066500,20066607-20066769,
20067211-20067420,20067515-20067668,20067761-20067839,
20067999-20068146,20068501-20068671,20068771-20069385
Length = 1250
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 661 PATPPPPRSLSATPVASQQNGTLRRYG 741
P +PP P S +TP +S + T RR G
Sbjct: 42 PGSPPTPSSAGSTPTSSSSSPTARRSG 68
>04_04_0243 -
23858975-23860706,23861178-23861230,23861338-23861538,
23861649-23861990,23862277-23862423,23862945-23863086,
23863876-23863959,23864772-23864779
Length = 902
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +1
Query: 574 KNTQAPDTNTFIAATRGSSNSLD-RSNGPCPATPPP-PRSLSATPVASQQNGTL 729
K T P+ ++ T +S++L RS+ P T PP PR L +P ++QNGT+
Sbjct: 187 KQTGTPEMDS---VTEEASDALTIRSDPITPITNPPLPRCLMNSPCDTEQNGTI 237
>10_01_0026 - 351737-353443
Length = 568
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 598 NTFIAATRGSSNSLDRS-NGPCPATPPPPRSLSATP 702
N+ + S+SL +S + P P++PPPP S +A P
Sbjct: 13 NSTTPSAPSPSSSLSKSPSPPSPSSPPPPASTNAPP 48
>03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776
Length = 429
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1
Query: 619 RGSSNSLDRSNGPCPATPPPPRSLSATPVASQQ 717
RG + +L S P P PPPP L TPVA +
Sbjct: 314 RGEAITLPESERPTPPPPPPP--LPPTPVAQHK 344
>03_05_1091 + 30322035-30322739,30322861-30324043,30324114-30325105,
30326409-30326798,30326896-30330060
Length = 2144
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 290 RNKWLSRPKHT-LDQYGVHADAALHFTPMHKPLRIQLPDL 406
R + +S+P +T + Q+ H AL F P HK R+ DL
Sbjct: 1543 RMQAMSKPTYTAITQHAKHGKPALVFVPTHKHARLTAVDL 1582
>05_07_0200 -
28368890-28369021,28369169-28369303,28369918-28369947,
28370019-28370093,28370222-28370333,28370440-28370621,
28370723-28370854,28372193-28373479
Length = 694
Score = 25.0 bits (52), Expect(2) = 3.5
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 655 PCPATPPPPRSLSATPVAS 711
P P PP PRS SA+P S
Sbjct: 312 PPPPPPPMPRSRSASPSPS 330
Score = 22.6 bits (46), Expect(2) = 3.5
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 577 NTQAPDTNTFIAATRGSSNSLDRSNGPCPATPPPP 681
++ AP T + + T S + L + P PPPP
Sbjct: 278 SSSAPSTPSCSSDTAASRSRLPELSKLPPIPPPPP 312
>04_01_0197 + 2323790-2324098,2324145-2324774
Length = 312
Score = 26.6 bits (56), Expect(2) = 3.8
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +1
Query: 655 PCPATPPPPRSLSATPVASQQNGTLRRYGHHI 750
P P PPP + T + +QQ + + HH+
Sbjct: 34 PPPPPPPPDTNAILTQILAQQANMMTAFLHHL 65
Score = 21.0 bits (42), Expect(2) = 3.8
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = +1
Query: 613 ATRGSSNSLDRSNGPCPATPPPP 681
A G N + SN PPPP
Sbjct: 8 ANTGDGNQPEGSNHNHQGNPPPP 30
>12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232
Length = 1035
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1
Query: 619 RGSSNSLDRSNGPCPATPPPPRSLSATP 702
R SS LDR + P P PPPP A+P
Sbjct: 236 RTSSLYLDRRSPPLPPRPPPPPVRVASP 263
>03_01_0574 + 4243019-4244284
Length = 421
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 93 VKMLADGEIVGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGV 215
V L DG+ + SWN VT+L EK+T + GD + G+
Sbjct: 162 VVRLEDGDYLELVSWNPNWAVTEL-EKKTAALTGDANANGI 201
>02_04_0065 +
19395599-19395748,19396079-19396168,19396255-19396329,
19396405-19396455,19404574-19404653,19404746-19404826,
19405048-19405207
Length = 228
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +1
Query: 520 EASHLKQNYQNLKEAKRIKNTQAP---DTNTFIAATRGSSNSLDRSNGPCPATPPPPRSL 690
E + L++++ L R K QAP D +T +A GS S R GP PP + L
Sbjct: 105 ELTFLRRDF-TLSARLRYKKVQAPAIPDDDTLLAHASGSK-SKSRKRGPPSQAPPAVKKL 162
Query: 691 SATPVASQQNGTLRRY 738
+ ++ T+ Y
Sbjct: 163 FKEGDSDEKETTVSYY 178
>11_06_0692 + 26327487-26328509
Length = 340
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -1
Query: 680 GGGGVAGHGPFDLSKLFEEPLVAAMN 603
GGGG G FD S F P AAM+
Sbjct: 66 GGGGCLGDFDFDFSSRFPSPSAAAMS 91
>07_03_1474 -
26766078-26766536,26766634-26766885,26767201-26767401,
26767986-26768156,26768249-26768433,26768526-26768851,
26769430-26770631
Length = 931
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/75 (24%), Positives = 30/75 (40%)
Frame = +1
Query: 496 RTIAGYPLEASHLKQNYQNLKEAKRIKNTQAPDTNTFIAATRGSSNSLDRSNGPCPATPP 675
RT+A + + Y ++ +R+ +A DT +L+R P P+T P
Sbjct: 771 RTVAASRSQTHFILPEYL-MQRDQRLNLDEAVDTLKRAGVPEDEMANLERQLAPGPSTAP 829
Query: 676 PPRSLSATPVASQQN 720
P S + P N
Sbjct: 830 PAPSTATAPANRMMN 844
>07_01_0370 +
2749353-2749786,2749949-2750346,2750435-2750519,
2751200-2751314,2751538-2751591
Length = 361
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 586 APDTNTFIAATRGSSNSLDRSNGPCPATPPPPRSLSATPVASQQNGTLRRYG 741
A + +AA G L R+ P P PP PR+ S++ +++G R G
Sbjct: 48 ATTRHAVVAAGGGVPCLLPRAAFPSPTLPPKPRAFSSSGSLGRRDGGAPRGG 99
>05_03_0172 - 9165904-9166428
Length = 174
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +1
Query: 514 PLEASHLKQNYQNLKEAKRIKNTQAPDTNTFIAATRGSSN---SLDRSNGPCPATPPPPR 684
P + +HL+ + + + EA P+ F+ A+ +++ +S P P PPPP
Sbjct: 76 PEQIAHLRASLRGVAEAWH--KIDHPNITKFVGASMATADLNIPQGQSTAP-PLPPPPPD 132
Query: 685 SLSATPVASQQNGTLRRY 738
+ V GTL+ Y
Sbjct: 133 TPCCVVVEYLTGGTLKSY 150
>10_06_0145 + 11215895-11216860
Length = 321
Score = 28.3 bits (60), Expect = 6.9
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +1
Query: 580 TQAPDTNTFIAA---TRGSSNSLDRSNGPCPATPPPPRSLSATPVASQQ 717
++A T T AA + GSS S SN ATPP PR P QQ
Sbjct: 242 SEASTTTTADAADVSSTGSSPSPTSSNQAATATPPAPRPPPPLPETIQQ 290
>05_07_0066 +
27453611-27453627,27454729-27454872,27455998-27456690,
27457700-27458111,27458220-27458297,27458938-27458953,
27459038-27459192
Length = 504
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 6/57 (10%)
Frame = +1
Query: 595 TNTFIAATRGSSNSLDRSNGPCPA------TPPPPRSLSATPVASQQNGTLRRYGHH 747
T+ ++AA S S R+ P P PP S +A P S R +GHH
Sbjct: 102 TSPYLAAASASLESKPRTRAPPPPPPAPAPAPPSSSSAAAAPGRSPARERERDHGHH 158
>03_06_0519 - 34481751-34482722
Length = 323
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 610 AATRGSSNSLDRSNGPCPATPPPPRSLSATPVASQQNGTLR 732
A T S + RSN A P PP +++A P +S +R
Sbjct: 87 APTSSSPTAARRSNRLAGAPPDPPAAVAAPPTSSSPTTAMR 127
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 643 RSNGPCPATPPPPRSLSATP 702
R P P+ PP PR+LSA P
Sbjct: 25 RPAAPLPSAPPRPRALSAAP 44
>01_01_1130 +
8959909-8960396,8960588-8960638,8960736-8960827,
8960964-8961054,8961877-8961937,8962172-8962216,
8962318-8962391,8962565-8962637,8963288-8963345,
8963398-8963468,8963801-8963837,8964040-8964128,
8964207-8964263,8964366-8964449,8964529-8964627,
8964765-8964869,8965145-8965216,8965308-8965497,
8965810-8966207
Length = 744
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 613 ATRGSSNSLDRSNGPCPATPPPPRSLSATPVASQQNGTL 729
A S+ ++DR+ P P +PPPP P NGTL
Sbjct: 63 ARESSATAVDRTPPPTPPSPPPP------PPPPPTNGTL 95
>07_01_0474 + 3579653-3579821,3580407-3580744
Length = 168
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 649 NGPCPATPPPPRSLSAT 699
N P PA+PPPP S S++
Sbjct: 127 NAPAPASPPPPPSSSSS 143
>04_04_1400 -
33259716-33260069,33260172-33260219,33260471-33260596,
33260850-33260900,33260963-33261055,33261217-33261272,
33261465-33261522,33262306-33262365,33262513-33262623,
33263368-33263949,33264026-33264097
Length = 536
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 655 PCPATPPPPRSLSATPVASQQN 720
P PA+P P RS SAT V + Q+
Sbjct: 91 PAPASPAPRRSASATAVLAAQD 112
>03_02_1009 +
13189349-13189592,13189782-13189882,13191085-13191090,
13191712-13191933,13192052-13192137,13192330-13192426,
13192817-13192909,13193031-13193186
Length = 334
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +1
Query: 619 RGSSNSLDRSNGPCPATPPPP-RSLSATPVAS 711
RG L S G P+ PPPP S S+ P A+
Sbjct: 27 RGEGRGLGLSRGAGPSPPPPPSSSTSSFPAAA 58
>01_05_0724 -
24612712-24612852,24612985-24613038,24613340-24613429,
24613499-24613780,24613926-24614119,24614379-24614508,
24614610-24614690,24614766-24614891,24615019-24615076,
24615319-24615380,24615753-24615803,24615946-24616065,
24616280-24616403,24616832-24616920,24617304-24617396,
24617910-24618063,24618673-24619178
Length = 784
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +1
Query: 655 PCPATPPPPRSLSATPVASQQNGTLRRYG 741
P PA PPP L A P A + GT G
Sbjct: 57 PSPAPDPPPPELPAAPEAEEVVGTAAAEG 85
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,887,700
Number of Sequences: 37544
Number of extensions: 424154
Number of successful extensions: 2703
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 2313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2649
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -